RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 CARD17Q5XLA6 110 aa13.93□□□□□ -0.18
C9orf3-219ENST00000488186 FBXW9Q5XUX1 488 aa13.93□□□□□ -0.18
C9orf3-219ENST00000488186 ABHD12BQ7Z5M8 362 aaPredicted RBP13.93□□□□□ -0.18
C9orf3-219ENST00000488186 GPR137CQ8N3F9 429 aa13.93□□□□□ -0.18
C9orf3-219ENST00000488186 POMGNT2Q8NAT1 580 aa13.93□□□□□ -0.18
C9orf3-219ENST00000488186 OR13C2Q8NGS9 318 aa13.93□□□□□ -0.18
C9orf3-219ENST00000488186 HDHD5Q9BXW7 423 aa13.93□□□□□ -0.18
C9orf3-219ENST00000488186 SLCO5A1Q9H2Y9 848 aa13.93□□□□□ -0.18
C9orf3-219ENST00000488186 NDRG3Q9UGV2 375 aa13.93□□□□□ -0.18
C9orf3-219ENST00000488186 PRSS50Q9UI38 385 aa13.93□□□□□ -0.18
C9orf3-219ENST00000488186 RCE1Q9Y256 329 aa13.93□□□□□ -0.18
C9orf3-219ENST00000488186 CRYBG3Q68DQ2 2970 aa13.92□□□□□ -0.18
C9orf3-219ENST00000488186 SLC35F4A4IF30 521 aa13.92□□□□□ -0.18
C9orf3-219ENST00000488186 CNOT4O95628 575 aaKnown RBP13.92□□□□□ -0.18
C9orf3-219ENST00000488186 FCGR1AP12314 374 aa13.92□□□□□ -0.18
C9orf3-219ENST00000488186 COX6B1P14854 86 aa13.92□□□□□ -0.18
C9orf3-219ENST00000488186 FASP25445 335 aa13.92□□□□□ -0.18
C9orf3-219ENST00000488186 DNAJA1P31689 397 aaKnown RBP13.92□□□□□ -0.18
C9orf3-219ENST00000488186 SELENOPP49908 381 aa13.92□□□□□ -0.18
C9orf3-219ENST00000488186 DAP3P51398 398 aaKnown RBP13.92□□□□□ -0.18
C9orf3-219ENST00000488186 BIDP55957 195 aa13.92□□□□□ -0.18
C9orf3-219ENST00000488186 ACTR3P61158 418 aa13.92□□□□□ -0.18
C9orf3-219ENST00000488186 FAPQ12884 760 aa13.92□□□□□ -0.18
C9orf3-219ENST00000488186 P2RY6Q15077 328 aa13.92□□□□□ -0.18
C9orf3-219ENST00000488186 MICAQ29983 383 aa13.92□□□□□ -0.18
C9orf3-219ENST00000488186 MEX3BQ6ZN04 569 aaKnown RBP13.92□□□□□ -0.18
C9orf3-219ENST00000488186 Q6ZT83 130 aa13.92□□□□□ -0.18
C9orf3-219ENST00000488186 HDDC2Q7Z4H3 204 aa13.92□□□□□ -0.18
C9orf3-219ENST00000488186 ZER1Q7Z7L7 766 aa13.92□□□□□ -0.18
C9orf3-219ENST00000488186 CXorf67Q86X51 503 aaPredicted RBP13.92□□□□□ -0.18
C9orf3-219ENST00000488186 OR6N1Q8NGY5 312 aa13.92□□□□□ -0.18
C9orf3-219ENST00000488186 MOSPD2Q8NHP6 518 aa13.92□□□□□ -0.18
C9orf3-219ENST00000488186 GIPC3Q8TF64 312 aa13.92□□□□□ -0.18
C9orf3-219ENST00000488186 SLCO4A1Q96BD0 722 aa13.92□□□□□ -0.18
C9orf3-219ENST00000488186 TXNDC15Q96J42 360 aa13.92□□□□□ -0.18
C9orf3-219ENST00000488186 ADAD1Q96M93 576 aaKnown RBP13.92□□□□□ -0.18
C9orf3-219ENST00000488186 SPOCK3Q9BQ16 436 aa13.92□□□□□ -0.18
C9orf3-219ENST00000488186 FUZQ9BT04 418 aa13.92□□□□□ -0.18
C9orf3-219ENST00000488186 EMC6Q9BV81 110 aa13.92□□□□□ -0.18
C9orf3-219ENST00000488186 SLC24A3Q9HC58 644 aa13.92□□□□□ -0.18
C9orf3-219ENST00000488186 MCCC2Q9HCC0 563 aa13.92□□□□□ -0.18
C9orf3-219ENST00000488186 B3GAT2Q9NPZ5 323 aa13.92□□□□□ -0.18
C9orf3-219ENST00000488186 ARMC1Q9NVT9 282 aa13.92□□□□□ -0.18
C9orf3-219ENST00000488186 ASB6Q9NWX5 421 aa13.92□□□□□ -0.18
C9orf3-219ENST00000488186 MED29Q9NX70 200 aa13.92□□□□□ -0.18
C9orf3-219ENST00000488186 HIF3AQ9Y2N7 669 aa13.92□□□□□ -0.18
C9orf3-219ENST00000488186 NBPF19A0A087WUL8 3843 aa13.91□□□□□ -0.18
C9orf3-219ENST00000488186 CIB4A0PJX0 185 aa13.91□□□□□ -0.18
C9orf3-219ENST00000488186 ERICH4A6NGS2 130 aa13.91□□□□□ -0.18
C9orf3-219ENST00000488186 TUBAL3A6NHL2 446 aa13.91□□□□□ -0.18
C9orf3-219ENST00000488186 C19orf84I3L1E1 186 aa13.91□□□□□ -0.18
C9orf3-219ENST00000488186 CDC42EP2O14613 210 aa13.91□□□□□ -0.18
C9orf3-219ENST00000488186 TRAF3IP2O43734 574 aaPredicted RBP13.91□□□□□ -0.18
C9orf3-219ENST00000488186 IL32P24001 234 aa13.91□□□□□ -0.18
C9orf3-219ENST00000488186 NTF4P34130 210 aa13.91□□□□□ -0.18
C9orf3-219ENST00000488186 LIMS1P48059 325 aa13.91□□□□□ -0.18
C9orf3-219ENST00000488186 CTXN1P60606 82 aa13.91□□□□□ -0.18
C9orf3-219ENST00000488186 ITGADQ13349 1161 aa13.91□□□□□ -0.18
C9orf3-219ENST00000488186 TSPO2Q5TGU0 170 aa13.91□□□□□ -0.18
C9orf3-219ENST00000488186 HMBOX1Q6NT76 420 aa13.91□□□□□ -0.18
C9orf3-219ENST00000488186 C1orf94Q6P1W5 598 aa13.91□□□□□ -0.18
C9orf3-219ENST00000488186 STEAP2Q8NFT2 490 aa13.91□□□□□ -0.18
C9orf3-219ENST00000488186 OR10G2Q8NGC3 310 aa13.91□□□□□ -0.18
C9orf3-219ENST00000488186 OR9Q2Q8NGE9 314 aa13.91□□□□□ -0.18
C9orf3-219ENST00000488186 OR4C15Q8NGM1 316 aa13.91□□□□□ -0.18
C9orf3-219ENST00000488186 KISS1RQ969F8 398 aaPredicted RBP13.91□□□□□ -0.18
C9orf3-219ENST00000488186 BDH2Q9BUT1 245 aa13.91□□□□□ -0.18
C9orf3-219ENST00000488186 ENKD1Q9H0I2 346 aa13.91□□□□□ -0.18
C9orf3-219ENST00000488186 NPDC1Q9NQX5 325 aaPredicted RBP13.91□□□□□ -0.18
C9orf3-219ENST00000488186 PDP1Q9P0J1 537 aaPredicted RBP13.91□□□□□ -0.18
C9orf3-219ENST00000488186 STX18Q9P2W9 335 aaKnown RBP13.91□□□□□ -0.18
C9orf3-219ENST00000488186 ANKHD1Q8IWZ3 2542 aaKnown RBP13.91□□□□□ -0.18
C9orf3-219ENST00000488186 CELSR2Q9HCU4 2923 aa13.9□□□□□ -0.18
C9orf3-219ENST00000488186 ZNF587BE7ETH6 402 aa13.9□□□□□ -0.18
C9orf3-219ENST00000488186 CASKO14936 926 aa13.9□□□□□ -0.18
C9orf3-219ENST00000488186 NDUFB2O95178 105 aa13.9□□□□□ -0.18
C9orf3-219ENST00000488186 GASTP01350 101 aa13.9□□□□□ -0.18
C9orf3-219ENST00000488186 IGFBP2P18065 325 aa13.9□□□□□ -0.18
C9orf3-219ENST00000488186 FPR3P25089 353 aa13.9□□□□□ -0.18
C9orf3-219ENST00000488186 EDNRAP25101 427 aa13.9□□□□□ -0.18
C9orf3-219ENST00000488186 COL8A1P27658 744 aa13.9□□□□□ -0.18
C9orf3-219ENST00000488186 UGT2B10P36537 528 aa13.9□□□□□ -0.18
C9orf3-219ENST00000488186 KIR2DL3P43628 341 aa13.9□□□□□ -0.18
C9orf3-219ENST00000488186 SORDQ00796 357 aa13.9□□□□□ -0.18
C9orf3-219ENST00000488186 TGFBR3Q03167 851 aa13.9□□□□□ -0.18
C9orf3-219ENST00000488186 TSPAN31Q12999 210 aa13.9□□□□□ -0.18
C9orf3-219ENST00000488186 TOP3AQ13472 1001 aaPredicted RBP13.9□□□□□ -0.18
C9orf3-219ENST00000488186 CAMK2DQ13557 499 aa13.9□□□□□ -0.18
C9orf3-219ENST00000488186 SNTB1Q13884 538 aaKnown RBP13.9□□□□□ -0.18
C9orf3-219ENST00000488186 MELKQ14680 651 aa13.9□□□□□ -0.18
C9orf3-219ENST00000488186 SFRP5Q5T4F7 317 aa13.9□□□□□ -0.18
C9orf3-219ENST00000488186 ZFP1Q6P2D0 407 aa13.9□□□□□ -0.18
C9orf3-219ENST00000488186 PGBD2Q6P3X8 592 aa13.9□□□□□ -0.18
C9orf3-219ENST00000488186 SMARCD3Q6STE5 483 aa13.9□□□□□ -0.18
C9orf3-219ENST00000488186 IGFN1Q86VF2 1251 aa13.9□□□□□ -0.18
C9orf3-219ENST00000488186 GABRG1Q8N1C3 465 aa13.9□□□□□ -0.18
C9orf3-219ENST00000488186 AQP11Q8NBQ7 271 aa13.9□□□□□ -0.18
C9orf3-219ENST00000488186 OR6X1Q8NH79 312 aa13.9□□□□□ -0.18
C9orf3-219ENST00000488186 PYDC1Q8WXC3 89 aa13.9□□□□□ -0.18
C9orf3-219ENST00000488186 STMN2Q93045 179 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms