RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 TPGS2Q68CL5 300 aa1.37□□□□□ -2.19
SMC4-219ENST00000487747 DUX4L9Q6RFH8 374 aaPredicted RBP1.37□□□□□ -2.19
SMC4-219ENST00000487747 AFTPHQ6ULP2 937 aa1.37□□□□□ -2.19
SMC4-219ENST00000487747 KDM7AQ6ZMT4 941 aa1.37□□□□□ -2.19
SMC4-219ENST00000487747 LRRC43Q8N309 656 aa1.37□□□□□ -2.19
SMC4-219ENST00000487747 STPG2Q8N412 459 aa1.37□□□□□ -2.19
SMC4-219ENST00000487747 FGF14Q92915 247 aa1.37□□□□□ -2.19
SMC4-219ENST00000487747 RNF157Q96PX1 679 aa1.37□□□□□ -2.19
SMC4-219ENST00000487747 NIPSNAP3BQ9BS92 247 aa1.37□□□□□ -2.19
SMC4-219ENST00000487747 RAB17Q9H0T7 212 aa1.37□□□□□ -2.19
SMC4-219ENST00000487747 SLC17A5Q9NRA2 495 aa1.37□□□□□ -2.19
SMC4-219ENST00000487747 SPATA7Q9P0W8 599 aa1.37□□□□□ -2.19
SMC4-219ENST00000487747 DUX4Q9UBX2 424 aa1.37□□□□□ -2.19
SMC4-219ENST00000487747 MGAT4BQ9UQ53 548 aa1.37□□□□□ -2.19
SMC4-219ENST00000487747 RASD1Q9Y272 281 aa1.37□□□□□ -2.19
SMC4-219ENST00000487747 RPL36Q9Y3U8 105 aaKnown RBP1.37□□□□□ -2.19
SMC4-219ENST00000487747 ADGRL1O94910 1474 aa1.37□□□□□ -2.19
SMC4-219ENST00000487747 CEMIPQ8WUJ3 1361 aa1.36□□□□□ -2.19
SMC4-219ENST00000487747 CIB4A0PJX0 185 aa1.36□□□□□ -2.19
SMC4-219ENST00000487747 TRIM64A6NGJ6 449 aa1.36□□□□□ -2.19
SMC4-219ENST00000487747 TRIM64BA6NI03 449 aa1.36□□□□□ -2.19
SMC4-219ENST00000487747 IGHG4P01861 327 aa1.36□□□□□ -2.19
SMC4-219ENST00000487747 IL10P22301 178 aa1.36□□□□□ -2.19
SMC4-219ENST00000487747 NCAPD2Q15021 1401 aa1.36□□□□□ -2.19
SMC4-219ENST00000487747 SLC15A2Q16348 729 aa1.36□□□□□ -2.19
SMC4-219ENST00000487747 GGTA1PQ4G0N0 100 aa1.36□□□□□ -2.19
SMC4-219ENST00000487747 CARD16Q5EG05 197 aa1.36□□□□□ -2.19
SMC4-219ENST00000487747 OR52E8Q6IFG1 317 aa1.36□□□□□ -2.19
SMC4-219ENST00000487747 CATSPER4Q7RTX7 472 aa1.36□□□□□ -2.19
SMC4-219ENST00000487747 ACOT1Q86TX2 421 aa1.36□□□□□ -2.19
SMC4-219ENST00000487747 HDDC3Q8N4P3 179 aa1.36□□□□□ -2.19
SMC4-219ENST00000487747 ZADH2Q8N4Q0 377 aa1.36□□□□□ -2.19
SMC4-219ENST00000487747 HSD3B7Q9H2F3 369 aa1.36□□□□□ -2.19
SMC4-219ENST00000487747 RBKSQ9H477 322 aa1.36□□□□□ -2.19
SMC4-219ENST00000487747 MEAF6Q9HAF1 191 aa1.36□□□□□ -2.19
SMC4-219ENST00000487747 SAMSN1Q9NSI8 373 aaKnown RBP1.36□□□□□ -2.19
SMC4-219ENST00000487747 CALYQ9NYX4 217 aa1.36□□□□□ -2.19
SMC4-219ENST00000487747 NINJ2Q9NZG7 142 aa1.36□□□□□ -2.19
SMC4-219ENST00000487747 CCER2I3L3R5 266 aa1.35□□□□□ -2.19
SMC4-219ENST00000487747 FOXE1O00358 373 aaPredicted RBP1.35□□□□□ -2.19
SMC4-219ENST00000487747 PFKFB2O60825 505 aa1.35□□□□□ -2.19
SMC4-219ENST00000487747 SEC22BO75396 215 aa1.35□□□□□ -2.19
SMC4-219ENST00000487747 NEBLO76041 1014 aa1.35□□□□□ -2.19
SMC4-219ENST00000487747 LRATO95237 230 aa1.35□□□□□ -2.19
SMC4-219ENST00000487747 CCNE2O96020 404 aa1.35□□□□□ -2.19
SMC4-219ENST00000487747 SMIM10L1P0DMW3 83 aa1.35□□□□□ -2.19
SMC4-219ENST00000487747 CD99P14209 185 aa1.35□□□□□ -2.19
SMC4-219ENST00000487747 PSMA2P25787 234 aa1.35□□□□□ -2.19
SMC4-219ENST00000487747 DDOSTP39656 456 aa1.35□□□□□ -2.19
SMC4-219ENST00000487747 RABIFP47224 123 aa1.35□□□□□ -2.19
SMC4-219ENST00000487747 CX3CR1P49238 355 aa1.35□□□□□ -2.19
SMC4-219ENST00000487747 BAMBIQ13145 260 aa1.35□□□□□ -2.19
SMC4-219ENST00000487747 ERCC8Q13216 396 aa1.35□□□□□ -2.19
SMC4-219ENST00000487747 RAB12Q6IQ22 244 aa1.35□□□□□ -2.19
SMC4-219ENST00000487747 RBM43Q6ZSC3 357 aaKnown RBP1.35□□□□□ -2.19
SMC4-219ENST00000487747 OR1P1Q8NH06 330 aa1.35□□□□□ -2.19
SMC4-219ENST00000487747 MGARPQ8TDB4 240 aa1.35□□□□□ -2.19
SMC4-219ENST00000487747 SMIM10Q96HG1 83 aa1.35□□□□□ -2.19
SMC4-219ENST00000487747 TMEM237Q96Q45 408 aa1.35□□□□□ -2.19
SMC4-219ENST00000487747 KCNK16Q96T55 309 aa1.35□□□□□ -2.19
SMC4-219ENST00000487747 SULT4A1Q9BR01 284 aa1.35□□□□□ -2.19
SMC4-219ENST00000487747 ZNF717Q9BY31 904 aaPredicted RBP1.35□□□□□ -2.19
SMC4-219ENST00000487747 MRPL13Q9BYD1 178 aaKnown RBP1.35□□□□□ -2.19
SMC4-219ENST00000487747 RANBP3Q9H6Z4 567 aaPredicted RBP1.35□□□□□ -2.19
SMC4-219ENST00000487747 YY1AP1Q9H869 796 aa1.35□□□□□ -2.19
SMC4-219ENST00000487747 UGT1A7Q9HAW7 530 aa1.35□□□□□ -2.19
SMC4-219ENST00000487747 UGT1A10Q9HAW8 530 aa1.35□□□□□ -2.19
SMC4-219ENST00000487747 UGT1A8Q9HAW9 530 aa1.35□□□□□ -2.19
SMC4-219ENST00000487747 GPATCH2LQ9NWQ4 482 aa1.35□□□□□ -2.19
SMC4-219ENST00000487747 THUMPD1Q9NXG2 353 aaKnown RBP1.35□□□□□ -2.19
SMC4-219ENST00000487747 IL36GQ9NZH8 169 aa1.35□□□□□ -2.19
SMC4-219ENST00000487747 MOSPD1Q9UJG1 213 aa1.35□□□□□ -2.19
SMC4-219ENST00000487747 PIN4Q9Y237 131 aaKnown RBP1.35□□□□□ -2.19
SMC4-219ENST00000487747 ABCC9O60706 1549 aa1.35□□□□□ -2.19
SMC4-219ENST00000487747 COL11A1P12107 1806 aaPredicted RBP1.34□□□□□ -2.19
SMC4-219ENST00000487747 RNF103-CHMP3A0A140T963 221 aa1.34□□□□□ -2.19
SMC4-219ENST00000487747 RASGRF2O14827 1237 aa1.34□□□□□ -2.19
SMC4-219ENST00000487747 XPO1O14980 1071 aaKnown RBP1.34□□□□□ -2.19
SMC4-219ENST00000487747 CHADO15335 359 aa1.34□□□□□ -2.19
SMC4-219ENST00000487747 DEDDO75618 318 aa1.34□□□□□ -2.19
SMC4-219ENST00000487747 FOLR1P15328 257 aa1.34□□□□□ -2.19
SMC4-219ENST00000487747 CYB561P49447 251 aa1.34□□□□□ -2.19
SMC4-219ENST00000487747 RAET1GQ6H3X3 334 aa1.34□□□□□ -2.19
SMC4-219ENST00000487747 LRRC8BQ6P9F7 803 aa1.34□□□□□ -2.19
SMC4-219ENST00000487747 HSDL2Q6YN16 418 aa1.34□□□□□ -2.19
SMC4-219ENST00000487747 PGAP1Q75T13 922 aa1.34□□□□□ -2.19
SMC4-219ENST00000487747 STRADAQ7RTN6 431 aa1.34□□□□□ -2.19
SMC4-219ENST00000487747 CNNM3Q8NE01 707 aa1.34□□□□□ -2.19
SMC4-219ENST00000487747 VN1R2Q8NFZ6 395 aa1.34□□□□□ -2.19
SMC4-219ENST00000487747 TSSK3Q96PN8 268 aa1.34□□□□□ -2.19
SMC4-219ENST00000487747 FAM111AQ96PZ2 611 aa1.34□□□□□ -2.19
SMC4-219ENST00000487747 GABARAPL3Q9BY60 117 aa1.34□□□□□ -2.19
SMC4-219ENST00000487747 HMG20AQ9NP66 347 aa1.34□□□□□ -2.19
SMC4-219ENST00000487747 SAMHD1Q9Y3Z3 626 aaKnown RBP1.34□□□□□ -2.19
SMC4-219ENST00000487747 HELZ2Q9BYK8 2649 aaKnown RBP1.34□□□□□ -2.2
SMC4-219ENST00000487747 NPIPA7E9PJI5 369 aa1.33□□□□□ -2.2
SMC4-219ENST00000487747 F8WDY8 70 aa1.33□□□□□ -2.2
SMC4-219ENST00000487747 PTBP3O95758 552 aaKnown RBP1.33□□□□□ -2.2
SMC4-219ENST00000487747 NPIPA8P0DM63 369 aa1.33□□□□□ -2.2
SMC4-219ENST00000487747 STMN1P16949 149 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms