RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 ZMYND19Q96E35 227 aaPredicted RBP8.48□□□□□ -1.05
SF3B1-211ENST00000487698 TMEM185BQ9H7F4 350 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 RPRD1BQ9NQG5 326 aaKnown RBP8.48□□□□□ -1.05
SF3B1-211ENST00000487698 DKKL1Q9UK85 242 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 B3GALT5Q9Y2C3 310 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 CAB39Q9Y376 341 aaPredicted RBP8.48□□□□□ -1.05
SF3B1-211ENST00000487698 HDGFL3Q9Y3E1 203 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 OR2M5A3KFT3 312 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 H7C1C5 153 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 DCTN6O00399 190 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 GLCEO94923 617 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 OR6A2O95222 327 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 LALBAP00709 142 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 PLGP00747 810 aaPredicted RBP8.48□□□□□ -1.05
SF3B1-211ENST00000487698 HLA-DOBP13765 273 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 AHCYP23526 432 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 GTF2E2P29084 291 aaKnown RBP8.48□□□□□ -1.05
SF3B1-211ENST00000487698 SRD5A2P31213 254 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 B3GALT5-AS1P59052 145 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 VBP1P61758 197 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 LCN6P62502 163 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 ACTC1P68032 377 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 ACTA1P68133 377 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 OC90Q02509 493 aaPredicted RBP8.48□□□□□ -1.05
SF3B1-211ENST00000487698 ZNF85Q03923 595 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 TPBGQ13641 420 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 GALEQ14376 348 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 ZNF322Q6U7Q0 402 aaPredicted RBP8.48□□□□□ -1.05
SF3B1-211ENST00000487698 NHLRC1Q6VVB1 395 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 PHC2Q8IXK0 858 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 GALNT16Q8N428 558 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 OR10H4Q8NGA5 316 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 OR51L1Q8NGJ5 315 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 NDNFQ8TB73 568 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 GATAD2BQ8WXI9 593 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 MIB2Q96AX9 1013 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 JSRP1Q96MG2 331 aaPredicted RBP8.48□□□□□ -1.05
SF3B1-211ENST00000487698 TSSK2Q96PF2 358 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 CNN2Q99439 309 aaKnown RBP8.48□□□□□ -1.05
SF3B1-211ENST00000487698 ALG8Q9BVK2 526 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 OR51E2Q9H255 320 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 TIMMDC1Q9NPL8 285 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 VSX1Q9NZR4 365 aaPredicted RBP8.48□□□□□ -1.05
SF3B1-211ENST00000487698 LRFN1Q9P244 771 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 ABI3Q9P2A4 366 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 B3GAT1Q9P2W7 334 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 MOKQ9UQ07 419 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 RPH3AQ9Y2J0 694 aaPredicted RBP8.48□□□□□ -1.05
SF3B1-211ENST00000487698 A0A1W2PRG6 482 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 DAPL1A0PJW8 107 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 PRSS37A4D1T9 235 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 PINLYPA6NC86 204 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 CDK2AP1O14519 115 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 AKR7A3O95154 331 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 WDPCPO95876 746 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 CNR1P21554 472 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 ACVR1BP36896 505 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 CASRP41180 1078 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 LSM3P62310 102 aaKnown RBP8.47□□□□□ -1.05
SF3B1-211ENST00000487698 BDH1Q02338 343 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 TLE3Q04726 772 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 FOXO1Q12778 655 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 SRSF6Q13247 344 aaKnown RBP8.47□□□□□ -1.05
SF3B1-211ENST00000487698 EEF1A1P5Q5VTE0 462 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 SPINK14Q6IE38 97 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 PXKQ7Z7A4 578 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 THAP4Q8WY91 577 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 SIGLEC12Q96PQ1 595 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 OR5B2Q96R09 309 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 MYCBPQ99417 103 aaPredicted RBP8.47□□□□□ -1.05
SF3B1-211ENST00000487698 TBX5Q99593 518 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 UTP23Q9BRU9 249 aaKnown RBP8.47□□□□□ -1.05
SF3B1-211ENST00000487698 ALG12Q9BV10 488 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 TRAPPC4Q9Y296 219 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 MRPS18CQ9Y3D5 142 aaKnown RBP8.47□□□□□ -1.05
SF3B1-211ENST00000487698 A0A1W2PNR3 127 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 A0A1W2PQL4 384 aaPredicted RBP8.47□□□□□ -1.05
SF3B1-211ENST00000487698 VGLL3A8MV65 326 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 ARHGEF9O43307 516 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 AKAP8O43823 692 aaKnown RBP8.47□□□□□ -1.05
SF3B1-211ENST00000487698 GPX5O75715 221 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 PMS2P2O95744 297 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 BCL10O95999 233 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 F10P00742 488 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 RENP00797 406 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 RFPL3SP0C7P2 107 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 OR2T7P0C7T2 308 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 WT1P19544 449 aaPredicted RBP8.47□□□□□ -1.05
SF3B1-211ENST00000487698 PYCR1P32322 319 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 TGFBR1P36897 503 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 RRADP55042 308 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 GPR85P60893 370 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 OR1C1Q15619 314 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 TMEM176BQ3YBM2 270 aaPredicted RBP8.47□□□□□ -1.05
SF3B1-211ENST00000487698 TIMM50Q3ZCQ8 353 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 LIPKQ5VXJ0 399 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 RAET1LQ5VY80 246 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 LYPD4Q6UWN0 246 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 TMPRSS11AQ6ZMR5 421 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 ZBTB46Q86UZ6 589 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms