RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 CARD17Q5XLA6 110 aa10.56□□□□□ -0.72
VPS16-208ENST00000487461 FAM91A1Q658Y4 838 aa10.56□□□□□ -0.72
VPS16-208ENST00000487461 MDP1Q86V88 176 aa10.56□□□□□ -0.72
VPS16-208ENST00000487461 KRT73Q86Y46 540 aa10.56□□□□□ -0.72
VPS16-208ENST00000487461 C20orf196Q8IYI0 205 aa10.56□□□□□ -0.72
VPS16-208ENST00000487461 ADPRHL1Q8NDY3 354 aa10.56□□□□□ -0.72
VPS16-208ENST00000487461 PIK3C3Q8NEB9 887 aa10.56□□□□□ -0.72
VPS16-208ENST00000487461 RNF217Q8TC41 542 aa10.56□□□□□ -0.72
VPS16-208ENST00000487461 SLC47A1Q96FL8 570 aa10.56□□□□□ -0.72
VPS16-208ENST00000487461 CCDC28BQ9BUN5 200 aa10.56□□□□□ -0.72
VPS16-208ENST00000487461 EMC6Q9BV81 110 aa10.56□□□□□ -0.72
VPS16-208ENST00000487461 SPATA5L1Q9BVQ7 753 aa10.56□□□□□ -0.72
VPS16-208ENST00000487461 RAB1BQ9H0U4 201 aa10.56□□□□□ -0.72
VPS16-208ENST00000487461 ZNF442Q9H7R0 627 aa10.56□□□□□ -0.72
VPS16-208ENST00000487461 TMEM27Q9HBJ8 222 aa10.56□□□□□ -0.72
VPS16-208ENST00000487461 MOV10Q9HCE1 1003 aaKnown RBP10.56□□□□□ -0.72
VPS16-208ENST00000487461 MYOZ1Q9NP98 299 aaPredicted RBP10.56□□□□□ -0.72
VPS16-208ENST00000487461 B3GNT2Q9NY97 397 aa10.56□□□□□ -0.72
VPS16-208ENST00000487461 SVEP1Q4LDE5 3571 aa10.55□□□□□ -0.72
VPS16-208ENST00000487461 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.55□□□□□ -0.722e-8■■■■□ 25.8
VPS16-208ENST00000487461 A0A0B4J2E0 115 aa10.55□□□□□ -0.72
VPS16-208ENST00000487461 A0A1B0GX12 115 aa10.55□□□□□ -0.72
VPS16-208ENST00000487461 SH3PXD2BA1X283 911 aa10.55□□□□□ -0.72
VPS16-208ENST00000487461 VSTM5A8MXK1 200 aa10.55□□□□□ -0.72
VPS16-208ENST00000487461 LRRN3E7EW58 273 aa10.55□□□□□ -0.72
VPS16-208ENST00000487461 HLA-HP01893 362 aa10.55□□□□□ -0.72
VPS16-208ENST00000487461 ZNF23P17027 643 aa10.55□□□□□ -0.72
VPS16-208ENST00000487461 PPIBP23284 216 aaKnown RBP10.55□□□□□ -0.72
VPS16-208ENST00000487461 SLC6A2P23975 617 aa10.55□□□□□ -0.72
VPS16-208ENST00000487461 AQP1P29972 269 aa10.55□□□□□ -0.72
VPS16-208ENST00000487461 CAPZA2P47755 286 aa10.55□□□□□ -0.72
VPS16-208ENST00000487461 AQP5P55064 265 aa10.55□□□□□ -0.72
VPS16-208ENST00000487461 CDH12P55289 794 aa10.55□□□□□ -0.72
VPS16-208ENST00000487461 NPRL3Q12980 569 aa10.55□□□□□ -0.72
VPS16-208ENST00000487461 MFSD13AQ14CX5 517 aa10.55□□□□□ -0.72
VPS16-208ENST00000487461 AGKQ53H12 422 aa10.55□□□□□ -0.72
VPS16-208ENST00000487461 FAM120AOSQ5T036 256 aa10.55□□□□□ -0.72
VPS16-208ENST00000487461 AGBL2Q5U5Z8 902 aa10.55□□□□□ -0.72
VPS16-208ENST00000487461 FAM166AQ6J272 317 aa10.55□□□□□ -0.72
VPS16-208ENST00000487461 DLEU7Q6UYE1 221 aa10.55□□□□□ -0.72
VPS16-208ENST00000487461 IL17RELQ6ZVW7 336 aa10.55□□□□□ -0.72
VPS16-208ENST00000487461 SPATA21Q7Z572 469 aa10.55□□□□□ -0.72
VPS16-208ENST00000487461 UEVLDQ8IX04 471 aa10.55□□□□□ -0.72
VPS16-208ENST00000487461 CCDC36Q8IYA8 594 aa10.55□□□□□ -0.72
VPS16-208ENST00000487461 SVOPLQ8N434 492 aa10.55□□□□□ -0.72
VPS16-208ENST00000487461 ZNF540Q8NDQ6 660 aa10.55□□□□□ -0.72
VPS16-208ENST00000487461 OR6S1Q8NH40 331 aa10.55□□□□□ -0.72
VPS16-208ENST00000487461 LRR1Q96L50 414 aa10.55□□□□□ -0.72
VPS16-208ENST00000487461 ANKRD27Q96NW4 1050 aa10.55□□□□□ -0.72
VPS16-208ENST00000487461 MOGAT1Q96PD6 335 aa10.55□□□□□ -0.72
VPS16-208ENST00000487461 SOX7Q9BT81 388 aa10.55□□□□□ -0.72
VPS16-208ENST00000487461 BPESC1Q9GZL8 116 aa10.55□□□□□ -0.72
VPS16-208ENST00000487461 TMEM38AQ9H6F2 299 aa10.55□□□□□ -0.72
VPS16-208ENST00000487461 CHODLQ9H9P2 273 aa10.55□□□□□ -0.72
VPS16-208ENST00000487461 MED29Q9NX70 200 aa10.55□□□□□ -0.72
VPS16-208ENST00000487461 SELENONQ9NZV5 590 aa10.55□□□□□ -0.72
VPS16-208ENST00000487461 KCNS2Q9ULS6 477 aa10.55□□□□□ -0.72
VPS16-208ENST00000487461 LRP5LA4QPB2 252 aa10.54□□□□□ -0.72
VPS16-208ENST00000487461 PRORSD1PA6NEY8 169 aa10.54□□□□□ -0.72
VPS16-208ENST00000487461 PLPP3O14495 311 aa10.54□□□□□ -0.72
VPS16-208ENST00000487461 ATP8B1O43520 1251 aa10.54□□□□□ -0.72
VPS16-208ENST00000487461 AKAP8O43823 692 aaKnown RBP10.54□□□□□ -0.72
VPS16-208ENST00000487461 ERLIN1O75477 346 aa10.54□□□□□ -0.72
VPS16-208ENST00000487461 MFN2O95140 757 aa10.54□□□□□ -0.72
VPS16-208ENST00000487461 TGFAP01135 160 aa10.54□□□□□ -0.72
VPS16-208ENST00000487461 DAOP14920 347 aa10.54□□□□□ -0.72
VPS16-208ENST00000487461 NQO1P15559 274 aaKnown RBP10.54□□□□□ -0.72
VPS16-208ENST00000487461 THBS2P35442 1172 aa10.54□□□□□ -0.72
VPS16-208ENST00000487461 RGS8P57771 180 aaPredicted RBP10.54□□□□□ -0.72
VPS16-208ENST00000487461 SRSF2Q01130 221 aaKnown RBP10.54□□□□□ -0.72
VPS16-208ENST00000487461 PIGFQ07326 219 aa10.54□□□□□ -0.72
VPS16-208ENST00000487461 PMS2P3Q13401 168 aa10.54□□□□□ -0.72
VPS16-208ENST00000487461 CAMK2DQ13557 499 aa10.54□□□□□ -0.72
VPS16-208ENST00000487461 DAG1Q14118 895 aa10.54□□□□□ -0.72
VPS16-208ENST00000487461 MSMPQ1L6U9 139 aa10.54□□□□□ -0.72
VPS16-208ENST00000487461 KRTAP24-1Q3LI83 254 aa10.54□□□□□ -0.72
VPS16-208ENST00000487461 RUNDC3AQ59EK9 446 aa10.54□□□□□ -0.72
VPS16-208ENST00000487461 CDK20Q8IZL9 346 aa10.54□□□□□ -0.72
VPS16-208ENST00000487461 SCAIQ8N9R8 606 aa10.54□□□□□ -0.72
VPS16-208ENST00000487461 SMYD1Q8NB12 490 aa10.54□□□□□ -0.72
VPS16-208ENST00000487461 HIPK4Q8NE63 616 aa10.54□□□□□ -0.72
VPS16-208ENST00000487461 IL17RDQ8NFM7 739 aa10.54□□□□□ -0.72
VPS16-208ENST00000487461 LRRC8CQ8TDW0 803 aa10.54□□□□□ -0.72
VPS16-208ENST00000487461 NEU4Q8WWR8 484 aaPredicted RBP10.54□□□□□ -0.72
VPS16-208ENST00000487461 MS4A3Q96HJ5 214 aa10.54□□□□□ -0.72
VPS16-208ENST00000487461 ZNF75AQ96N20 296 aa10.54□□□□□ -0.72
VPS16-208ENST00000487461 ZNF607Q96SK3 696 aa10.54□□□□□ -0.72
VPS16-208ENST00000487461 EPYCQ99645 322 aa10.54□□□□□ -0.72
VPS16-208ENST00000487461 NOX3Q9HBY0 568 aa10.54□□□□□ -0.72
VPS16-208ENST00000487461 MRPL39Q9NYK5 338 aaKnown RBP10.54□□□□□ -0.72
VPS16-208ENST00000487461 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.54□□□□□ -0.72
VPS16-208ENST00000487461 TESQ9UGI8 421 aaKnown RBP10.54□□□□□ -0.72
VPS16-208ENST00000487461 FBXO9Q9UK97 447 aaPredicted RBP10.54□□□□□ -0.72
VPS16-208ENST00000487461 USP22Q9UPT9 525 aa10.54□□□□□ -0.72
VPS16-208ENST00000487461 CORINQ9Y5Q5 1042 aa10.54□□□□□ -0.72
VPS16-208ENST00000487461 ZNF726A6NNF4 738 aa10.53□□□□□ -0.72
VPS16-208ENST00000487461 EVPLLA8MZ36 301 aa10.53□□□□□ -0.72
VPS16-208ENST00000487461 M0QX08 132 aa10.53□□□□□ -0.72
VPS16-208ENST00000487461 SERPINB7O75635 380 aa10.53□□□□□ -0.72
VPS16-208ENST00000487461 ADRA2AP08913 450 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms