RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 PCLOQ9Y6V0 5065 aa9.95□□□□□ -0.82
TRIM56-204ENST00000487252 DPPA5A6NC42 116 aa9.95□□□□□ -0.82
TRIM56-204ENST00000487252 VSTM5A8MXK1 200 aa9.95□□□□□ -0.82
TRIM56-204ENST00000487252 ETV2O00321 342 aaPredicted RBP9.95□□□□□ -0.82
TRIM56-204ENST00000487252 SYNGR3O43761 229 aa9.95□□□□□ -0.82
TRIM56-204ENST00000487252 MRPL33O75394 65 aaKnown RBP9.95□□□□□ -0.82
TRIM56-204ENST00000487252 NCR1O76036 304 aa9.95□□□□□ -0.82
TRIM56-204ENST00000487252 H6PDO95479 791 aa9.95□□□□□ -0.82
TRIM56-204ENST00000487252 TCN1P20061 433 aaPredicted RBP9.95□□□□□ -0.82
TRIM56-204ENST00000487252 PRPH2P23942 346 aa9.95□□□□□ -0.82
TRIM56-204ENST00000487252 MPGP29372 298 aa9.95□□□□□ -0.82
TRIM56-204ENST00000487252 HMOX2P30519 316 aa9.95□□□□□ -0.82
TRIM56-204ENST00000487252 TRA2BP62995 288 aaKnown RBP9.95□□□□□ -0.82
TRIM56-204ENST00000487252 SELENBP1Q13228 472 aa9.95□□□□□ -0.82
TRIM56-204ENST00000487252 MAD2L1Q13257 205 aaPredicted RBP9.95□□□□□ -0.82
TRIM56-204ENST00000487252 NFYCQ13952 458 aa9.95□□□□□ -0.82
TRIM56-204ENST00000487252 HIKESHIQ53FT3 197 aa9.95□□□□□ -0.82
TRIM56-204ENST00000487252 SLC25A53Q5H9E4 307 aa9.95□□□□□ -0.82
TRIM56-204ENST00000487252 ARMCX4Q5H9R4 360 aa9.95□□□□□ -0.82
TRIM56-204ENST00000487252 PAGE3Q5JUK9 113 aa9.95□□□□□ -0.82
TRIM56-204ENST00000487252 KLHL24Q6TFL4 600 aa9.95□□□□□ -0.82
TRIM56-204ENST00000487252 SAMD14Q8IZD0 417 aaPredicted RBP9.95□□□□□ -0.82
TRIM56-204ENST00000487252 FAM169BQ8N8A8 192 aa9.95□□□□□ -0.82
TRIM56-204ENST00000487252 ANKFN1Q8N957 763 aa9.95□□□□□ -0.82
TRIM56-204ENST00000487252 GATSQ8NAP1 163 aa9.95□□□□□ -0.82
TRIM56-204ENST00000487252 ICA1LQ8NDH6 482 aa9.95□□□□□ -0.82
TRIM56-204ENST00000487252 HOXB13Q92826 284 aaPredicted RBP9.95□□□□□ -0.82
TRIM56-204ENST00000487252 ATP6V1E2Q96A05 226 aa9.95□□□□□ -0.82
TRIM56-204ENST00000487252 ZNF524Q96C55 264 aa9.95□□□□□ -0.82
TRIM56-204ENST00000487252 TRIM15Q9C019 465 aa9.95□□□□□ -0.82
TRIM56-204ENST00000487252 SEC61A2Q9H9S3 476 aa9.95□□□□□ -0.82
TRIM56-204ENST00000487252 TCF7L1Q9HCS4 588 aa9.95□□□□□ -0.82
TRIM56-204ENST00000487252 SLC7A10Q9NS82 523 aa9.95□□□□□ -0.82
TRIM56-204ENST00000487252 GMPR2Q9P2T1 348 aaKnown RBP9.95□□□□□ -0.82
TRIM56-204ENST00000487252 REV1Q9UBZ9 1251 aa9.95□□□□□ -0.82
TRIM56-204ENST00000487252 RNF11Q9Y3C5 154 aa9.95□□□□□ -0.82
TRIM56-204ENST00000487252 RNF114Q9Y508 228 aa9.95□□□□□ -0.82
TRIM56-204ENST00000487252 A0A1W2PQD3 144 aa9.94□□□□□ -0.82
TRIM56-204ENST00000487252 TCRBV5S2A0A599 114 aa9.94□□□□□ -0.82
TRIM56-204ENST00000487252 GXYLT2A0PJZ3 443 aa9.94□□□□□ -0.82
TRIM56-204ENST00000487252 CCDC154A6NI56 674 aa9.94□□□□□ -0.82
TRIM56-204ENST00000487252 M0R233 179 aa9.94□□□□□ -0.82
TRIM56-204ENST00000487252 UPK1AO00322 258 aa9.94□□□□□ -0.82
TRIM56-204ENST00000487252 GPR171O14626 319 aa9.94□□□□□ -0.82
TRIM56-204ENST00000487252 DNAJA2O60884 412 aa9.94□□□□□ -0.82
TRIM56-204ENST00000487252 PPP1R3DO95685 299 aa9.94□□□□□ -0.82
TRIM56-204ENST00000487252 IGKV3-15P01624 115 aa9.94□□□□□ -0.82
TRIM56-204ENST00000487252 BMP2P12643 396 aa9.94□□□□□ -0.82
TRIM56-204ENST00000487252 ZNF26P17031 533 aaPredicted RBP9.94□□□□□ -0.82
TRIM56-204ENST00000487252 PRKCAP17252 672 aa9.94□□□□□ -0.82
TRIM56-204ENST00000487252 MAP3K8P41279 467 aa9.94□□□□□ -0.82
TRIM56-204ENST00000487252 MTNR1AP48039 350 aa9.94□□□□□ -0.82
TRIM56-204ENST00000487252 ALDH9A1P49189 494 aa9.94□□□□□ -0.82
TRIM56-204ENST00000487252 GSK3BP49841 420 aa9.94□□□□□ -0.82
TRIM56-204ENST00000487252 MED21Q13503 144 aa9.94□□□□□ -0.82
TRIM56-204ENST00000487252 PDCD1Q15116 288 aa9.94□□□□□ -0.82
TRIM56-204ENST00000487252 CD226Q15762 336 aa9.94□□□□□ -0.82
TRIM56-204ENST00000487252 MSMPQ1L6U9 139 aa9.94□□□□□ -0.82
TRIM56-204ENST00000487252 LRRC36Q1X8D7 754 aa9.94□□□□□ -0.82
TRIM56-204ENST00000487252 DLEU7Q6UYE1 221 aa9.94□□□□□ -0.82
TRIM56-204ENST00000487252 R3HCC1LQ7Z5L2 792 aaKnown RBP9.94□□□□□ -0.82
TRIM56-204ENST00000487252 OR2L13Q8N349 312 aa9.94□□□□□ -0.82
TRIM56-204ENST00000487252 FNDC5Q8NAU1 212 aa9.94□□□□□ -0.82
TRIM56-204ENST00000487252 PAPD5Q8NDF8 572 aaKnown RBP9.94□□□□□ -0.82
TRIM56-204ENST00000487252 ATP6V1C2Q8NEY4 427 aa9.94□□□□□ -0.82
TRIM56-204ENST00000487252 LINC01006Q8NI28 216 aa9.94□□□□□ -0.82
TRIM56-204ENST00000487252 VPS33AQ96AX1 596 aa9.94□□□□□ -0.82
TRIM56-204ENST00000487252 C1orf50Q9BV19 199 aa9.94□□□□□ -0.82
TRIM56-204ENST00000487252 FAIM2Q9BWQ8 316 aa9.94□□□□□ -0.82
TRIM56-204ENST00000487252 ASH2LQ9UBL3 628 aa9.94□□□□□ -0.82
TRIM56-204ENST00000487252 ANGPTL3Q9Y5C1 460 aa9.94□□□□□ -0.82
TRIM56-204ENST00000487252 ULK1O75385 1050 aa9.93□□□□□ -0.82
TRIM56-204ENST00000487252 GPIP06744 558 aa9.93□□□□□ -0.82
TRIM56-204ENST00000487252 CSF1P09603 554 aa9.93□□□□□ -0.82
TRIM56-204ENST00000487252 G6PDP11413 515 aa9.93□□□□□ -0.82
TRIM56-204ENST00000487252 DIO1P49895 249 aa9.93□□□□□ -0.82
TRIM56-204ENST00000487252 ZNF117Q03924 483 aa9.93□□□□□ -0.82
TRIM56-204ENST00000487252 LIPEQ05469 1076 aa9.93□□□□□ -0.82
TRIM56-204ENST00000487252 TOMM34Q15785 309 aaPredicted RBP9.93□□□□□ -0.82
TRIM56-204ENST00000487252 TIGD2Q4W5G0 525 aa9.93□□□□□ -0.82
TRIM56-204ENST00000487252 RFTN2Q52LD8 501 aaPredicted RBP9.93□□□□□ -0.82
TRIM56-204ENST00000487252 TSPO2Q5TGU0 170 aa9.93□□□□□ -0.82
TRIM56-204ENST00000487252 NANOGP8Q6NSW7 305 aa9.93□□□□□ -0.82
TRIM56-204ENST00000487252 TMPPEQ6ZT21 453 aa9.93□□□□□ -0.82
TRIM56-204ENST00000487252 MYPOPQ86VE0 399 aaPredicted RBP9.93□□□□□ -0.82
TRIM56-204ENST00000487252 WDFY1Q8IWB7 410 aa9.93□□□□□ -0.82
TRIM56-204ENST00000487252 ADGRG5Q8IZF4 528 aa9.93□□□□□ -0.82
TRIM56-204ENST00000487252 FAM9CQ8IZT9 166 aa9.93□□□□□ -0.82
TRIM56-204ENST00000487252 PACRGLQ8N7B6 248 aa9.93□□□□□ -0.82
TRIM56-204ENST00000487252 GLB1L3Q8NCI6 653 aaPredicted RBP9.93□□□□□ -0.82
TRIM56-204ENST00000487252 Q9H521 79 aa9.93□□□□□ -0.82
TRIM56-204ENST00000487252 NANOGQ9H9S0 305 aa9.93□□□□□ -0.82
TRIM56-204ENST00000487252 C3orf14Q9HBI5 128 aa9.93□□□□□ -0.82
TRIM56-204ENST00000487252 POLR3HQ9Y535 204 aaPredicted RBP9.93□□□□□ -0.82
TRIM56-204ENST00000487252 SNX13Q9Y5W8 968 aa9.93□□□□□ -0.82
TRIM56-204ENST00000487252 SOX21Q9Y651 276 aaPredicted RBP9.93□□□□□ -0.82
TRIM56-204ENST00000487252 TET2Q6N021 2002 aaPredicted RBP9.92□□□□□ -0.82
TRIM56-204ENST00000487252 ARPC4-TTLL3A0A0A6YYG9 625 aa9.92□□□□□ -0.82
TRIM56-204ENST00000487252 TTC36A6NLP5 189 aa9.92□□□□□ -0.82
TRIM56-204ENST00000487252 SRRM5B3KS81 715 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms