RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 NQO1P15559 274 aaKnown RBP6.28□□□□□ -1.4
UBE4B-209ENST00000487244 GTF2E2P29084 291 aaKnown RBP6.28□□□□□ -1.4
UBE4B-209ENST00000487244 PRDX6P30041 224 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 YAP1P46937 504 aaKnown RBP6.28□□□□□ -1.4
UBE4B-209ENST00000487244 UGT2B15P54855 530 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 CLDN17P56750 224 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 IL1RL1Q01638 556 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 BSPH1Q075Z2 132 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 PMS2P3Q13401 168 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 PIN1Q13526 163 aaPredicted RBP6.28□□□□□ -1.4
UBE4B-209ENST00000487244 KEAP1Q14145 624 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 PPA1Q15181 289 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 GABRA6Q16445 453 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 ZNF74Q16587 644 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 HIKESHIQ53FT3 197 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 BEX5Q5H9J7 111 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 PHYHD1Q5SRE7 291 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 NCMAPQ5T1S8 102 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 CARD17Q5XLA6 110 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 ADAM5Q6NVV9 412 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 NIPAL3Q6P499 406 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 C5orf46Q6UWT4 87 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 NHLRC1Q6VVB1 395 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 ZNF704Q6ZNC4 412 aaPredicted RBP6.28□□□□□ -1.4
UBE4B-209ENST00000487244 H1FNTQ75WM6 255 aaPredicted RBP6.28□□□□□ -1.4
UBE4B-209ENST00000487244 SLC46A3Q7Z3Q1 461 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 MEX3DQ86XN8 651 aaKnown RBP6.28□□□□□ -1.4
UBE4B-209ENST00000487244 NKAIN4Q8IVV8 208 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 TMEM123Q8N131 208 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 FAM86B1Q8N7N1 296 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 WDR31Q8NA23 367 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 FAM156AQ8NDB6 213 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 KBTBD8Q8NFY9 601 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 LILRB1Q8NHL6 650 aaPredicted RBP6.28□□□□□ -1.4
UBE4B-209ENST00000487244 RASSF5Q8WWW0 418 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 HSD17B8Q92506 261 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 NINJ1Q92982 152 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 CMTM5Q96DZ9 223 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 TXNDC15Q96J42 360 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 OXGR1Q96P68 337 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 OR2M2Q96R28 347 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 CCT8L2Q96SF2 557 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 KCTD14Q9BQ13 255 aaPredicted RBP6.28□□□□□ -1.4
UBE4B-209ENST00000487244 C1QTNF6Q9BXI9 259 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 AMBRA1Q9C0C7 1298 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 C7orf69Q9H7B7 122 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 EVA1AQ9H8M9 152 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 MEPEQ9NQ76 525 aaPredicted RBP6.28□□□□□ -1.4
UBE4B-209ENST00000487244 C20orf141Q9NUB4 165 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 PARPBPQ9NWS1 579 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 MED29Q9NX70 200 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 TAS2R16Q9NYV7 291 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 RHCGQ9UBD6 479 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 UPB1Q9UBR1 384 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 BAG5Q9UL15 447 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 B3GALT5Q9Y2C3 310 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 ARL2BPQ9Y2Y0 163 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 SLC25A15Q9Y619 301 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 RTTNQ86VV8 2226 aa6.27□□□□□ -1.4
UBE4B-209ENST00000487244 TLN2Q9Y4G6 2542 aa6.27□□□□□ -1.41
UBE4B-209ENST00000487244 C11orf98E9PRG8 122 aa6.27□□□□□ -1.41
UBE4B-209ENST00000487244 PLPP3O14495 311 aa6.27□□□□□ -1.41
UBE4B-209ENST00000487244 FFAR1O14842 300 aa6.27□□□□□ -1.41
UBE4B-209ENST00000487244 GSTA4O15217 222 aa6.27□□□□□ -1.41
UBE4B-209ENST00000487244 SEC14L2O76054 403 aa6.27□□□□□ -1.41
UBE4B-209ENST00000487244 VAMP5O95183 116 aa6.27□□□□□ -1.41
UBE4B-209ENST00000487244 OR5F1O95221 314 aa6.27□□□□□ -1.41
UBE4B-209ENST00000487244 SERPINA1P01009 418 aa6.27□□□□□ -1.41
UBE4B-209ENST00000487244 IFNA14P01570 189 aa6.27□□□□□ -1.41
UBE4B-209ENST00000487244 ZNF43P17038 809 aa6.27□□□□□ -1.41
UBE4B-209ENST00000487244 FUT1P19526 365 aa6.27□□□□□ -1.41
UBE4B-209ENST00000487244 TCN1P20061 433 aaPredicted RBP6.27□□□□□ -1.41
UBE4B-209ENST00000487244 DNASE1P24855 282 aa6.27□□□□□ -1.41
UBE4B-209ENST00000487244 MPGP29372 298 aa6.27□□□□□ -1.41
UBE4B-209ENST00000487244 MSX2P35548 267 aaPredicted RBP6.27□□□□□ -1.41
UBE4B-209ENST00000487244 ZNF83P51522 516 aa6.27□□□□□ -1.41
UBE4B-209ENST00000487244 NR1H2P55055 460 aa6.27□□□□□ -1.41
UBE4B-209ENST00000487244 TAS2R41P59536 307 aa6.27□□□□□ -1.41
UBE4B-209ENST00000487244 SELENOWP63302 87 aa6.27□□□□□ -1.41
UBE4B-209ENST00000487244 TUBA1BP68363 451 aa6.27□□□□□ -1.41
UBE4B-209ENST00000487244 TUBA4AP68366 448 aa6.27□□□□□ -1.41
UBE4B-209ENST00000487244 ROR2Q01974 943 aaKnown RBP6.27□□□□□ -1.41
UBE4B-209ENST00000487244 POU3F1Q03052 451 aaPredicted RBP6.27□□□□□ -1.41
UBE4B-209ENST00000487244 PUDPQ08623 228 aa6.27□□□□□ -1.41
UBE4B-209ENST00000487244 C1DQ13901 141 aaKnown RBP6.27□□□□□ -1.41
UBE4B-209ENST00000487244 DEFB113Q30KQ7 82 aa6.27□□□□□ -1.41
UBE4B-209ENST00000487244 TIMM23BQ5SRD1 257 aa6.27□□□□□ -1.41
UBE4B-209ENST00000487244 TTC33Q6PID6 262 aaPredicted RBP6.27□□□□□ -1.41
UBE4B-209ENST00000487244 TUBA1AQ71U36 451 aa6.27□□□□□ -1.41
UBE4B-209ENST00000487244 TSEN54Q7Z6J9 526 aaKnown RBP6.27□□□□□ -1.41
UBE4B-209ENST00000487244 KRTAP1-3Q8IUG1 177 aa6.27□□□□□ -1.41
UBE4B-209ENST00000487244 FITM2Q8N6M3 262 aa6.27□□□□□ -1.41
UBE4B-209ENST00000487244 SCAIQ8N9R8 606 aa6.27□□□□□ -1.41
UBE4B-209ENST00000487244 POMGNT2Q8NAT1 580 aa6.27□□□□□ -1.41
UBE4B-209ENST00000487244 ADPRHL1Q8NDY3 354 aa6.27□□□□□ -1.41
UBE4B-209ENST00000487244 OR6S1Q8NH40 331 aa6.27□□□□□ -1.41
UBE4B-209ENST00000487244 AKAP1Q92667 903 aaKnown RBP eCLIP6.27□□□□□ -1.41
UBE4B-209ENST00000487244 MUS81Q96NY9 551 aa6.27□□□□□ -1.41
UBE4B-209ENST00000487244 LRRC37BQ96QE4 947 aa6.27□□□□□ -1.41
UBE4B-209ENST00000487244 EPYCQ99645 322 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms