RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 ZNF836Q6ZNA1 936 aa13.58□□□□□ -0.23
EPHB4-206ENST00000487222 OR6M1Q8NGM8 313 aa13.58□□□□□ -0.23
EPHB4-206ENST00000487222 NUDT8Q8WV74 236 aa13.58□□□□□ -0.23
EPHB4-206ENST00000487222 ARPC5LQ9BPX5 153 aa13.58□□□□□ -0.23
EPHB4-206ENST00000487222 PRR14Q9BWN1 585 aa13.58□□□□□ -0.23
EPHB4-206ENST00000487222 GABARAPL3Q9BY60 117 aa13.58□□□□□ -0.23
EPHB4-206ENST00000487222 FBXO8Q9NRD0 319 aa13.58□□□□□ -0.23
EPHB4-206ENST00000487222 TMED7Q9Y3B3 224 aa13.58□□□□□ -0.23
EPHB4-206ENST00000487222 GMDSO60547 372 aa13.58□□□□□ -0.24
EPHB4-206ENST00000487222 OR7C1O76099 320 aaPredicted RBP13.58□□□□□ -0.24
EPHB4-206ENST00000487222 MZT1Q08AG7 82 aa13.58□□□□□ -0.24
EPHB4-206ENST00000487222 MEP1BQ16820 701 aa13.58□□□□□ -0.24
EPHB4-206ENST00000487222 MANEAQ5SRI9 462 aa13.58□□□□□ -0.24
EPHB4-206ENST00000487222 SLX4Q8IY92 1834 aa13.58□□□□□ -0.24
EPHB4-206ENST00000487222 SPPL3Q8TCT6 385 aa13.58□□□□□ -0.24
EPHB4-206ENST00000487222 SELENOIQ9C0D9 397 aa13.58□□□□□ -0.24
EPHB4-206ENST00000487222 GCM1Q9NP62 436 aa13.58□□□□□ -0.24
EPHB4-206ENST00000487222 SLC25A37Q9NYZ2 338 aa13.58□□□□□ -0.24
EPHB4-206ENST00000487222 THAP10Q9P2Z0 257 aaPredicted RBP13.58□□□□□ -0.24
EPHB4-206ENST00000487222 PRICKLE3O43900 615 aaPredicted RBP13.58□□□□□ -0.24
EPHB4-206ENST00000487222 KLK8O60259 260 aa13.58□□□□□ -0.24
EPHB4-206ENST00000487222 STK17BO94768 372 aa13.58□□□□□ -0.24
EPHB4-206ENST00000487222 GLCEO94923 617 aa13.58□□□□□ -0.24
EPHB4-206ENST00000487222 HMGA1P17096 107 aaKnown RBP13.58□□□□□ -0.24
EPHB4-206ENST00000487222 SRMP19623 302 aa13.58□□□□□ -0.24
EPHB4-206ENST00000487222 TRHRP34981 398 aaPredicted RBP13.58□□□□□ -0.24
EPHB4-206ENST00000487222 SLC6A12P48065 614 aa13.58□□□□□ -0.24
EPHB4-206ENST00000487222 CCR6P51684 374 aa13.58□□□□□ -0.24
EPHB4-206ENST00000487222 ZNF750Q32MQ0 723 aa13.58□□□□□ -0.24
EPHB4-206ENST00000487222 LYSMD4Q5XG99 296 aa13.58□□□□□ -0.24
EPHB4-206ENST00000487222 SAXO2Q658L1 398 aa13.58□□□□□ -0.24
EPHB4-206ENST00000487222 PSMF1Q92530 271 aa13.58□□□□□ -0.24
EPHB4-206ENST00000487222 LYSMD1Q96S90 227 aa13.58□□□□□ -0.24
EPHB4-206ENST00000487222 A0A0B4J2A0 478 aa13.58□□□□□ -0.24
EPHB4-206ENST00000487222 PRAMEF27A3QJZ7 478 aa13.58□□□□□ -0.24
EPHB4-206ENST00000487222 TOR1AO14656 332 aa13.58□□□□□ -0.24
EPHB4-206ENST00000487222 KCNK2O95069 426 aa13.58□□□□□ -0.24
EPHB4-206ENST00000487222 DDAH2O95865 285 aa13.58□□□□□ -0.24
EPHB4-206ENST00000487222 ITGB2P05107 769 aa13.58□□□□□ -0.24
EPHB4-206ENST00000487222 FCGR2AP12318 317 aa13.58□□□□□ -0.24
EPHB4-206ENST00000487222 C17orf67Q0P5P2 114 aa13.58□□□□□ -0.24
EPHB4-206ENST00000487222 PRAMEF9Q5VWM5 478 aa13.58□□□□□ -0.24
EPHB4-206ENST00000487222 Q6ZTK2 550 aa13.58□□□□□ -0.24
EPHB4-206ENST00000487222 OLIG3Q7RTU3 272 aa13.58□□□□□ -0.24
EPHB4-206ENST00000487222 SLC16A14Q7RTX9 510 aa13.58□□□□□ -0.24
EPHB4-206ENST00000487222 HAS2Q92819 552 aa13.58□□□□□ -0.24
EPHB4-206ENST00000487222 FAM3DQ96BQ1 224 aa13.58□□□□□ -0.24
EPHB4-206ENST00000487222 STACQ99469 402 aa13.58□□□□□ -0.24
EPHB4-206ENST00000487222 C20orf85Q9H1P6 137 aa13.58□□□□□ -0.24
EPHB4-206ENST00000487222 SHPKQ9UHJ6 478 aa13.58□□□□□ -0.24
EPHB4-206ENST00000487222 PCDHGA1Q9Y5H4 931 aa13.58□□□□□ -0.24
EPHB4-206ENST00000487222 WIF1Q9Y5W5 379 aa13.58□□□□□ -0.24
EPHB4-206ENST00000487222 A0A1W2PPV4 95 aa13.57□□□□□ -0.24
EPHB4-206ENST00000487222 IGLV3-25P01717 112 aa13.57□□□□□ -0.24
EPHB4-206ENST00000487222 SERPINA7P05543 415 aa13.57□□□□□ -0.24
EPHB4-206ENST00000487222 DUSP6Q16828 381 aa13.57□□□□□ -0.24
EPHB4-206ENST00000487222 FBXW12Q6X9E4 464 aa13.57□□□□□ -0.24
EPHB4-206ENST00000487222 RBM45Q8IUH3 476 aaKnown RBP13.57□□□□□ -0.24
EPHB4-206ENST00000487222 NKAIN3Q8N8D7 197 aa13.57□□□□□ -0.24
EPHB4-206ENST00000487222 OR51D1Q8NGF3 324 aa13.57□□□□□ -0.24
EPHB4-206ENST00000487222 SLC19A3Q9BZV2 496 aa13.57□□□□□ -0.24
EPHB4-206ENST00000487222 DUSP22Q9NRW4 184 aa13.57□□□□□ -0.24
EPHB4-206ENST00000487222 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.57□□□□□ -0.24
EPHB4-206ENST00000487222 MMACHCQ9Y4U1 282 aa13.57□□□□□ -0.24
EPHB4-206ENST00000487222 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.57□□□□□ -0.24
EPHB4-206ENST00000487222 ZNF705FA8MVS1 300 aaPredicted RBP13.57□□□□□ -0.24
EPHB4-206ENST00000487222 MSTNO14793 375 aa13.57□□□□□ -0.24
EPHB4-206ENST00000487222 PMS2P2O95744 297 aa13.57□□□□□ -0.24
EPHB4-206ENST00000487222 ZNF705DP0CH99 300 aaPredicted RBP13.57□□□□□ -0.24
EPHB4-206ENST00000487222 ZNF705BP0CI00 300 aaPredicted RBP13.57□□□□□ -0.24
EPHB4-206ENST00000487222 EPHA4P54764 986 aa13.57□□□□□ -0.24
EPHB4-206ENST00000487222 TAS2R30P59541 319 aa13.57□□□□□ -0.24
EPHB4-206ENST00000487222 ASAH1Q13510 395 aa13.57□□□□□ -0.24
EPHB4-206ENST00000487222 METRNLQ641Q3 311 aa13.57□□□□□ -0.24
EPHB4-206ENST00000487222 BBS1Q8NFJ9 593 aa13.57□□□□□ -0.24
EPHB4-206ENST00000487222 EMC9Q9Y3B6 208 aa13.57□□□□□ -0.24
EPHB4-206ENST00000487222 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.57□□□□□ -0.24
EPHB4-206ENST00000487222 LRIT2A6NDA9 550 aa13.57□□□□□ -0.24
EPHB4-206ENST00000487222 TRIM64BA6NI03 449 aa13.57□□□□□ -0.24
EPHB4-206ENST00000487222 TNFSF12O43508 249 aa13.57□□□□□ -0.24
EPHB4-206ENST00000487222 HTR5AP47898 357 aa13.57□□□□□ -0.24
EPHB4-206ENST00000487222 AFMIDQ63HM1 303 aa13.57□□□□□ -0.24
EPHB4-206ENST00000487222 VASH1Q7L8A9 365 aaPredicted RBP13.57□□□□□ -0.24
EPHB4-206ENST00000487222 MAP1BP46821 2468 aaKnown RBP13.57□□□□□ -0.24
EPHB4-206ENST00000487222 LOC100289279A0A1B0GTE1 492 aa13.57□□□□□ -0.24
EPHB4-206ENST00000487222 PDGFAP04085 211 aa13.57□□□□□ -0.24
EPHB4-206ENST00000487222 NAGAP17050 411 aa13.57□□□□□ -0.24
EPHB4-206ENST00000487222 BLVRBP30043 206 aaPredicted RBP13.57□□□□□ -0.24
EPHB4-206ENST00000487222 EEF1A2Q05639 463 aaKnown RBP13.57□□□□□ -0.24
EPHB4-206ENST00000487222 MFAP5Q13361 173 aa13.57□□□□□ -0.24
EPHB4-206ENST00000487222 VN1R2Q8NFZ6 395 aa13.57□□□□□ -0.24
EPHB4-206ENST00000487222 CPT1CQ8TCG5 803 aa13.57□□□□□ -0.24
EPHB4-206ENST00000487222 RNF141Q8WVD5 230 aa13.57□□□□□ -0.24
EPHB4-206ENST00000487222 TEAD3Q99594 435 aa13.57□□□□□ -0.24
EPHB4-206ENST00000487222 SEMA6CQ9H3T2 930 aa13.57□□□□□ -0.24
EPHB4-206ENST00000487222 PLCH1Q4KWH8 1693 aa13.57□□□□□ -0.24
EPHB4-206ENST00000487222 A0A0U1RQK1 487 aa13.56□□□□□ -0.24
EPHB4-206ENST00000487222 TCRBV5S2A0A599 114 aa13.56□□□□□ -0.24
EPHB4-206ENST00000487222 MRPL33O75394 65 aaKnown RBP13.56□□□□□ -0.24
EPHB4-206ENST00000487222 SBK2P0C263 348 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms