RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 IGLV3-10A0A075B6K4 115 aa3.61□□□□□ -1.83
PRPF38A-203ENST00000487160 A0A1B0GUS0 222 aa3.61□□□□□ -1.83
PRPF38A-203ENST00000487160 UBXN8O00124 270 aa3.61□□□□□ -1.83
PRPF38A-203ENST00000487160 AP3B1O00203 1094 aa3.61□□□□□ -1.83
PRPF38A-203ENST00000487160 TNFSF11O14788 317 aa3.61□□□□□ -1.83
PRPF38A-203ENST00000487160 TBL1XO60907 577 aa3.61□□□□□ -1.83
PRPF38A-203ENST00000487160 ECI2O75521 394 aa3.61□□□□□ -1.83
PRPF38A-203ENST00000487160 LYPLA1O75608 230 aaPredicted RBP3.61□□□□□ -1.83
PRPF38A-203ENST00000487160 SLITRK3O94933 977 aa3.61□□□□□ -1.83
PRPF38A-203ENST00000487160 LALBAP00709 142 aa3.61□□□□□ -1.83
PRPF38A-203ENST00000487160 IGHG4P01861 327 aa3.61□□□□□ -1.83
PRPF38A-203ENST00000487160 SEMG1P04279 462 aa3.61□□□□□ -1.83
PRPF38A-203ENST00000487160 ASGR1P07306 291 aa3.61□□□□□ -1.83
PRPF38A-203ENST00000487160 HSMCR30P0CW71 290 aa3.61□□□□□ -1.83
PRPF38A-203ENST00000487160 DBTP11182 482 aaKnown RBP3.61□□□□□ -1.83
PRPF38A-203ENST00000487160 CCDC130P13994 396 aa3.61□□□□□ -1.83
PRPF38A-203ENST00000487160 KLK2P20151 261 aa3.61□□□□□ -1.83
PRPF38A-203ENST00000487160 HLCSP50747 726 aa3.61□□□□□ -1.83
PRPF38A-203ENST00000487160 EFNB2P52799 333 aa3.61□□□□□ -1.83
PRPF38A-203ENST00000487160 DIO3P55073 304 aa3.61□□□□□ -1.83
PRPF38A-203ENST00000487160 CCL23P55773 120 aa3.61□□□□□ -1.83
PRPF38A-203ENST00000487160 RPS14P62263 151 aaKnown RBP3.61□□□□□ -1.83
PRPF38A-203ENST00000487160 NCBP1Q09161 790 aaKnown RBP3.61□□□□□ -1.83
PRPF38A-203ENST00000487160 BOLA3Q53S33 107 aa3.61□□□□□ -1.83
PRPF38A-203ENST00000487160 EFL1Q7Z2Z2 1120 aaKnown RBP3.61□□□□□ -1.83
PRPF38A-203ENST00000487160 SLC35F2Q8IXU6 374 aa3.61□□□□□ -1.83
PRPF38A-203ENST00000487160 OR2L13Q8N349 312 aa3.61□□□□□ -1.83
PRPF38A-203ENST00000487160 OR10H4Q8NGA5 316 aa3.61□□□□□ -1.83
PRPF38A-203ENST00000487160 OR8J1Q8NGP2 316 aa3.61□□□□□ -1.83
PRPF38A-203ENST00000487160 ACER1Q8TDN7 264 aa3.61□□□□□ -1.83
PRPF38A-203ENST00000487160 RNF139Q8WU17 664 aa3.61□□□□□ -1.83
PRPF38A-203ENST00000487160 RAPGEF5Q92565 580 aa3.61□□□□□ -1.83
PRPF38A-203ENST00000487160 EFHD2Q96C19 240 aaPredicted RBP3.61□□□□□ -1.83
PRPF38A-203ENST00000487160 RBM14Q96PK6 669 aaKnown RBP3.61□□□□□ -1.83
PRPF38A-203ENST00000487160 TBX15Q96SF7 602 aa3.61□□□□□ -1.83
PRPF38A-203ENST00000487160 ZBTB18Q99592 522 aa3.61□□□□□ -1.83
PRPF38A-203ENST00000487160 ZNF184Q99676 751 aaPredicted RBP3.61□□□□□ -1.83
PRPF38A-203ENST00000487160 UBE2ZQ9H832 354 aaPredicted RBP3.61□□□□□ -1.83
PRPF38A-203ENST00000487160 VCPKMTQ9H867 229 aa3.61□□□□□ -1.83
PRPF38A-203ENST00000487160 POLE4Q9NR33 117 aa3.61□□□□□ -1.83
PRPF38A-203ENST00000487160 PRPF19Q9UMS4 504 aaKnown RBP3.61□□□□□ -1.83
PRPF38A-203ENST00000487160 ZFHX4Q86UP3 3567 aa3.61□□□□□ -1.83
PRPF38A-203ENST00000487160 ELP1O95163 1332 aa3.61□□□□□ -1.83
PRPF38A-203ENST00000487160 DNAH14Q0VDD8 3507 aa3.61□□□□□ -1.83
PRPF38A-203ENST00000487160 WDR87Q6ZQQ6 2873 aa3.61□□□□□ -1.83
PRPF38A-203ENST00000487160 RAI1Q7Z5J4 1906 aaPredicted RBP3.6□□□□□ -1.83
PRPF38A-203ENST00000487160 SCN10AQ9Y5Y9 1956 aa3.6□□□□□ -1.83
PRPF38A-203ENST00000487160 IGHV1OR15-1A0A075B7D0 117 aa3.6□□□□□ -1.83
PRPF38A-203ENST00000487160 TRDCB7Z8K6 153 aa3.6□□□□□ -1.83
PRPF38A-203ENST00000487160 F5H6K3 240 aa3.6□□□□□ -1.83
PRPF38A-203ENST00000487160 K7N7A8 449 aa3.6□□□□□ -1.83
PRPF38A-203ENST00000487160 RGS16O15492 202 aaPredicted RBP3.6□□□□□ -1.83
PRPF38A-203ENST00000487160 PFKFB2O60825 505 aa3.6□□□□□ -1.83
PRPF38A-203ENST00000487160 CIAO1O76071 339 aa3.6□□□□□ -1.83
PRPF38A-203ENST00000487160 HSPB1P04792 205 aaKnown RBP3.6□□□□□ -1.83
PRPF38A-203ENST00000487160 TPM2P07951 284 aa3.6□□□□□ -1.83
PRPF38A-203ENST00000487160 POU2F1P14859 743 aa3.6□□□□□ -1.83
PRPF38A-203ENST00000487160 AQP1P29972 269 aa3.6□□□□□ -1.83
PRPF38A-203ENST00000487160 CCT3P49368 545 aaKnown RBP3.6□□□□□ -1.83
PRPF38A-203ENST00000487160 HNRNPA3P51991 378 aaKnown RBP3.6□□□□□ -1.83
PRPF38A-203ENST00000487160 BIDP55957 195 aa3.6□□□□□ -1.83
PRPF38A-203ENST00000487160 TIMM10P62072 90 aa3.6□□□□□ -1.83
PRPF38A-203ENST00000487160 HMGN5P82970 282 aaKnown RBP3.6□□□□□ -1.83
PRPF38A-203ENST00000487160 TNFRSF17Q02223 184 aa3.6□□□□□ -1.83
PRPF38A-203ENST00000487160 CHRNB3Q05901 458 aa3.6□□□□□ -1.83
PRPF38A-203ENST00000487160 KLRC3Q07444 240 aa3.6□□□□□ -1.83
PRPF38A-203ENST00000487160 CCDC173Q0VFZ6 552 aa3.6□□□□□ -1.83
PRPF38A-203ENST00000487160 ZMYND11Q15326 602 aa3.6□□□□□ -1.83
PRPF38A-203ENST00000487160 DPYSL2Q16555 572 aa3.6□□□□□ -1.83
PRPF38A-203ENST00000487160 CFAP221Q4G0U5 840 aa3.6□□□□□ -1.83
PRPF38A-203ENST00000487160 SFT2D3Q587I9 215 aa3.6□□□□□ -1.83
PRPF38A-203ENST00000487160 C9orf129Q5T035 196 aaKnown RBP3.6□□□□□ -1.83
PRPF38A-203ENST00000487160 PDZK1Q5T2W1 519 aa3.6□□□□□ -1.83
PRPF38A-203ENST00000487160 TFAP2EQ6VUC0 442 aa3.6□□□□□ -1.83
PRPF38A-203ENST00000487160 ZYG11AQ6WRX3 759 aa3.6□□□□□ -1.83
PRPF38A-203ENST00000487160 DEFB128Q7Z7B8 93 aa3.6□□□□□ -1.83
PRPF38A-203ENST00000487160 CEND1Q8N111 149 aa3.6□□□□□ -1.83
PRPF38A-203ENST00000487160 LRRC75A-AS1Q8N1F1 130 aa3.6□□□□□ -1.83
PRPF38A-203ENST00000487160 MFSD9Q8NBP5 474 aa3.6□□□□□ -1.83
PRPF38A-203ENST00000487160 SCFD1Q8WVM8 642 aa3.6□□□□□ -1.83
PRPF38A-203ENST00000487160 RPRD1AQ96P16 312 aaPredicted RBP3.6□□□□□ -1.83
PRPF38A-203ENST00000487160 SLC38A2Q96QD8 506 aa3.6□□□□□ -1.83
PRPF38A-203ENST00000487160 CCNL2Q96S94 520 aaPredicted RBP3.6□□□□□ -1.83
PRPF38A-203ENST00000487160 NMUR2Q9GZQ4 415 aa3.6□□□□□ -1.83
PRPF38A-203ENST00000487160 SLITRK2Q9H156 845 aa3.6□□□□□ -1.83
PRPF38A-203ENST00000487160 PTGES2Q9H7Z7 377 aa3.6□□□□□ -1.83
PRPF38A-203ENST00000487160 ADAM28Q9UKQ2 775 aa3.6□□□□□ -1.83
PRPF38A-203ENST00000487160 MMP24Q9Y5R2 645 aa3.6□□□□□ -1.83
PRPF38A-203ENST00000487160 MYH7BA7E2Y1 1941 aa3.6□□□□□ -1.83
PRPF38A-203ENST00000487160 FRYLO94915 3013 aa3.6□□□□□ -1.83
PRPF38A-203ENST00000487160 ZFHX2Q9C0A1 2572 aaPredicted RBP3.59□□□□□ -1.83
PRPF38A-203ENST00000487160 IGHV7-81A0A0B4J1V7 117 aa3.59□□□□□ -1.83
PRPF38A-203ENST00000487160 PCP4L1A6NKN8 68 aa3.59□□□□□ -1.83
PRPF38A-203ENST00000487160 POLR2DO15514 142 aaKnown RBP3.59□□□□□ -1.83
PRPF38A-203ENST00000487160 B4GALT2O60909 372 aa3.59□□□□□ -1.83
PRPF38A-203ENST00000487160 ATP5LO75964 103 aa3.59□□□□□ -1.83
PRPF38A-203ENST00000487160 LYPD3O95274 346 aa3.59□□□□□ -1.83
PRPF38A-203ENST00000487160 AP2A1O95782 977 aa3.59□□□□□ -1.83
PRPF38A-203ENST00000487160 SNAI1O95863 264 aaPredicted RBP3.59□□□□□ -1.83
PRPF38A-203ENST00000487160 PSMB1P20618 241 aaKnown RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms