RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 TAS2R5Q9NYW4 299 aa10.11□□□□□ -0.79
NUP50-216ENST00000486184 B3GAT1Q9P2W7 334 aa10.11□□□□□ -0.79
NUP50-216ENST00000486184 UPB1Q9UBR1 384 aa10.11□□□□□ -0.79
NUP50-216ENST00000486184 ING1Q9UK53 422 aaPredicted RBP10.11□□□□□ -0.79
NUP50-216ENST00000486184 RCE1Q9Y256 329 aa10.11□□□□□ -0.79
NUP50-216ENST00000486184 WIPF3A6NGB9 483 aa10.1□□□□□ -0.79
NUP50-216ENST00000486184 OR6C65A6NJZ3 312 aa10.1□□□□□ -0.79
NUP50-216ENST00000486184 G3V2T6 193 aa10.1□□□□□ -0.79
NUP50-216ENST00000486184 TRAF3IP2O43734 574 aaPredicted RBP10.1□□□□□ -0.79
NUP50-216ENST00000486184 SLC43A1O75387 559 aa10.1□□□□□ -0.79
NUP50-216ENST00000486184 BCL10O95999 233 aa10.1□□□□□ -0.79
NUP50-216ENST00000486184 ADAP00813 363 aa10.1□□□□□ -0.79
NUP50-216ENST00000486184 HLA-DOBP13765 273 aa10.1□□□□□ -0.79
NUP50-216ENST00000486184 ANXA8P13928 327 aa10.1□□□□□ -0.79
NUP50-216ENST00000486184 IFNGR1P15260 489 aa10.1□□□□□ -0.79
NUP50-216ENST00000486184 UQCRC1P31930 480 aa10.1□□□□□ -0.79
NUP50-216ENST00000486184 OR3A2P47893 321 aa10.1□□□□□ -0.79
NUP50-216ENST00000486184 GSSP48637 474 aa10.1□□□□□ -0.79
NUP50-216ENST00000486184 BIDP55957 195 aa10.1□□□□□ -0.79
NUP50-216ENST00000486184 RPS4XP62701 263 aaKnown RBP10.1□□□□□ -0.79
NUP50-216ENST00000486184 SRSF1Q07955 248 aaKnown RBP eCLIP10.1□□□□□ -0.79
NUP50-216ENST00000486184 TOP3AQ13472 1001 aaPredicted RBP10.1□□□□□ -0.79
NUP50-216ENST00000486184 RPL13AP3Q6NVV1 102 aa10.1□□□□□ -0.79
NUP50-216ENST00000486184 SHQ1Q6PI26 577 aaKnown RBP10.1□□□□□ -0.79
NUP50-216ENST00000486184 SMARCD3Q6STE5 483 aa10.1□□□□□ -0.79
NUP50-216ENST00000486184 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.1□□□□□ -0.79
NUP50-216ENST00000486184 ABHD12BQ7Z5M8 362 aaPredicted RBP10.1□□□□□ -0.79
NUP50-216ENST00000486184 ZDHHC13Q8IUH4 622 aa10.1□□□□□ -0.79
NUP50-216ENST00000486184 EPHX4Q8IUS5 362 aa10.1□□□□□ -0.79
NUP50-216ENST00000486184 SVOPLQ8N434 492 aa10.1□□□□□ -0.79
NUP50-216ENST00000486184 ZNF610Q8N9Z0 462 aa10.1□□□□□ -0.79
NUP50-216ENST00000486184 ATG16L2Q8NAA4 619 aa10.1□□□□□ -0.79
NUP50-216ENST00000486184 ICA1LQ8NDH6 482 aa10.1□□□□□ -0.79
NUP50-216ENST00000486184 MOSPD2Q8NHP6 518 aa10.1□□□□□ -0.79
NUP50-216ENST00000486184 CENPNQ96H22 339 aaPredicted RBP10.1□□□□□ -0.79
NUP50-216ENST00000486184 ADAD1Q96M93 576 aaKnown RBP10.1□□□□□ -0.79
NUP50-216ENST00000486184 ZNF385AQ96PM9 386 aaKnown RBP10.1□□□□□ -0.79
NUP50-216ENST00000486184 TNFRSF13CQ96RJ3 184 aa10.1□□□□□ -0.79
NUP50-216ENST00000486184 RBM24Q9BX46 236 aaKnown RBP10.1□□□□□ -0.79
NUP50-216ENST00000486184 POLDIP3Q9BY77 421 aaKnown RBP10.1□□□□□ -0.79
NUP50-216ENST00000486184 UCK2Q9BZX2 261 aa10.1□□□□□ -0.79
NUP50-216ENST00000486184 SLCO5A1Q9H2Y9 848 aa10.1□□□□□ -0.79
NUP50-216ENST00000486184 B3GAT2Q9NPZ5 323 aa10.1□□□□□ -0.79
NUP50-216ENST00000486184 MED29Q9NX70 200 aa10.1□□□□□ -0.79
NUP50-216ENST00000486184 STX18Q9P2W9 335 aaKnown RBP10.1□□□□□ -0.79
NUP50-216ENST00000486184 FOXD3Q9UJU5 478 aaPredicted RBP10.1□□□□□ -0.79
NUP50-216ENST00000486184 FLNCQ14315 2725 aa10.09□□□□□ -0.79
NUP50-216ENST00000486184 GCN1Q92616 2671 aaKnown RBP10.09□□□□□ -0.79
NUP50-216ENST00000486184 CLEC18AA5D8T8 446 aa10.09□□□□□ -0.79
NUP50-216ENST00000486184 RRP9O43818 475 aaKnown RBP10.09□□□□□ -0.79
NUP50-216ENST00000486184 BAG2O95816 211 aa10.09□□□□□ -0.79
NUP50-216ENST00000486184 CGAP01215 116 aa10.09□□□□□ -0.79
NUP50-216ENST00000486184 GASTP01350 101 aa10.09□□□□□ -0.79
NUP50-216ENST00000486184 IGHV3-9P01782 118 aa10.09□□□□□ -0.79
NUP50-216ENST00000486184 SLC6A6P31641 620 aa10.09□□□□□ -0.79
NUP50-216ENST00000486184 SELENOPP49908 381 aa10.09□□□□□ -0.79
NUP50-216ENST00000486184 RPS6KA3P51812 740 aa10.09□□□□□ -0.79
NUP50-216ENST00000486184 CTXN1P60606 82 aa10.09□□□□□ -0.79
NUP50-216ENST00000486184 MELKQ14680 651 aa10.09□□□□□ -0.79
NUP50-216ENST00000486184 CARD17Q5XLA6 110 aa10.09□□□□□ -0.79
NUP50-216ENST00000486184 FBXW9Q5XUX1 488 aa10.09□□□□□ -0.79
NUP50-216ENST00000486184 ZNF770Q6IQ21 691 aaPredicted RBP10.09□□□□□ -0.79
NUP50-216ENST00000486184 CLEC18BQ6UXF7 455 aa10.09□□□□□ -0.79
NUP50-216ENST00000486184 TFAP2EQ6VUC0 442 aa10.09□□□□□ -0.79
NUP50-216ENST00000486184 TMEM179BQ7Z7N9 219 aa10.09□□□□□ -0.79
NUP50-216ENST00000486184 IGFN1Q86VF2 1251 aa10.09□□□□□ -0.79
NUP50-216ENST00000486184 GPR137CQ8N3F9 429 aa10.09□□□□□ -0.79
NUP50-216ENST00000486184 POMGNT2Q8NAT1 580 aa10.09□□□□□ -0.79
NUP50-216ENST00000486184 CLEC18CQ8NCF0 446 aa10.09□□□□□ -0.79
NUP50-216ENST00000486184 OR6N1Q8NGY5 312 aa10.09□□□□□ -0.79
NUP50-216ENST00000486184 FEVQ99581 238 aa10.09□□□□□ -0.79
NUP50-216ENST00000486184 EMC6Q9BV81 110 aa10.09□□□□□ -0.79
NUP50-216ENST00000486184 DGCR6LQ9BY27 220 aa10.09□□□□□ -0.79
NUP50-216ENST00000486184 OR52D1Q9H346 318 aa10.09□□□□□ -0.79
NUP50-216ENST00000486184 MCCC2Q9HCC0 563 aa10.09□□□□□ -0.79
NUP50-216ENST00000486184 TBC1D23Q9NUY8 699 aa10.09□□□□□ -0.79
NUP50-216ENST00000486184 ASB6Q9NWX5 421 aa10.09□□□□□ -0.79
NUP50-216ENST00000486184 ELOVL5Q9NYP7 299 aa10.09□□□□□ -0.79
NUP50-216ENST00000486184 GRHPRQ9UBQ7 328 aa10.09□□□□□ -0.79
NUP50-216ENST00000486184 SIGLEC7Q9Y286 467 aa10.09□□□□□ -0.79
NUP50-216ENST00000486184 CDH10Q9Y6N8 788 aa10.09□□□□□ -0.79
NUP50-216ENST00000486184 FREM1Q5H8C1 2179 aa10.09□□□□□ -0.79
NUP50-216ENST00000486184 SLC35F4A4IF30 521 aa10.08□□□□□ -0.8
NUP50-216ENST00000486184 A6NIZ1 184 aa10.08□□□□□ -0.8
NUP50-216ENST00000486184 SAC3D1A6NKF1 404 aa10.08□□□□□ -0.8
NUP50-216ENST00000486184 A8MXE2 369 aa10.08□□□□□ -0.8
NUP50-216ENST00000486184 PRSS44E7EML9 344 aa10.08□□□□□ -0.8
NUP50-216ENST00000486184 ZNF587BE7ETH6 402 aa10.08□□□□□ -0.8
NUP50-216ENST00000486184 H3BN98 237 aa10.08□□□□□ -0.8
NUP50-216ENST00000486184 H3BNX3 289 aa10.08□□□□□ -0.8
NUP50-216ENST00000486184 XKRYO14609 159 aa10.08□□□□□ -0.8
NUP50-216ENST00000486184 KLF4O43474 513 aa10.08□□□□□ -0.8
NUP50-216ENST00000486184 CNOT4O95628 575 aaKnown RBP10.08□□□□□ -0.8
NUP50-216ENST00000486184 IGHG1P01857 330 aa10.08□□□□□ -0.8
NUP50-216ENST00000486184 TSPAN19P0C672 248 aa10.08□□□□□ -0.8
NUP50-216ENST00000486184 NR2C1P13056 603 aa10.08□□□□□ -0.8
NUP50-216ENST00000486184 NOS3P29474 1203 aa10.08□□□□□ -0.8
NUP50-216ENST00000486184 ACVR1BP36896 505 aa10.08□□□□□ -0.8
NUP50-216ENST00000486184 CLRN1P58418 232 aa10.08□□□□□ -0.8
NUP50-216ENST00000486184 RAP1BP61224 184 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms