RNA–Protein interactions for RNA: ENST00000484704.5

HLA-F-226, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 1,201 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-226ENST00000484704 MS4A18Q3C1V0 323 aa13.17□□□□□ -0.3
HLA-F-226ENST00000484704 TBRG1Q3YBR2 411 aa13.17□□□□□ -0.3
HLA-F-226ENST00000484704 C1QTNF12Q5T7M4 302 aa13.17□□□□□ -0.3
HLA-F-226ENST00000484704 YTHDF3Q7Z739 585 aaKnown RBP13.17□□□□□ -0.3
HLA-F-226ENST00000484704 TREML1Q86YW5 311 aa13.17□□□□□ -0.3
HLA-F-226ENST00000484704 NEUROG1Q92886 237 aa13.17□□□□□ -0.3
HLA-F-226ENST00000484704 TRMT61AQ96FX7 289 aaKnown RBP13.17□□□□□ -0.3
HLA-F-226ENST00000484704 AMBRA1Q9C0C7 1298 aa13.17□□□□□ -0.3
HLA-F-226ENST00000484704 PCDHAC1Q9H158 963 aa13.17□□□□□ -0.3
HLA-F-226ENST00000484704 FKRPQ9H9S5 495 aa13.17□□□□□ -0.3
HLA-F-226ENST00000484704 OBP2BQ9NPH6 170 aa13.17□□□□□ -0.3
HLA-F-226ENST00000484704 MED29Q9NX70 200 aa13.17□□□□□ -0.3
HLA-F-226ENST00000484704 ADA2Q9NZK5 511 aa13.17□□□□□ -0.3
HLA-F-226ENST00000484704 B3GAT1Q9P2W7 334 aa13.17□□□□□ -0.3
HLA-F-226ENST00000484704 RIMS3Q9UJD0 308 aa13.17□□□□□ -0.3
HLA-F-226ENST00000484704 ATP23Q9Y6H3 246 aa13.17□□□□□ -0.3
HLA-F-226ENST00000484704 VPS13CQ709C8 3753 aa13.17□□□□□ -0.3
HLA-F-226ENST00000484704 CADP27708 2225 aa13.16□□□□□ -0.3
HLA-F-226ENST00000484704 A0A096LPE4 126 aa13.16□□□□□ -0.3
HLA-F-226ENST00000484704 LOC102725191A0A1B0GVB3 256 aa13.16□□□□□ -0.3
HLA-F-226ENST00000484704 A0A1W2PPZ6 126 aa13.16□□□□□ -0.3
HLA-F-226ENST00000484704 PLPP3O14495 311 aa13.16□□□□□ -0.3
HLA-F-226ENST00000484704 HLA-DOBP13765 273 aa13.16□□□□□ -0.3
HLA-F-226ENST00000484704 PAX7P23759 505 aa13.16□□□□□ -0.3
HLA-F-226ENST00000484704 CRYBA2P53672 197 aa13.16□□□□□ -0.3
HLA-F-226ENST00000484704 ATP5J2P56134 94 aa13.16□□□□□ -0.3
HLA-F-226ENST00000484704 PSME3P61289 254 aa13.16□□□□□ -0.3
HLA-F-226ENST00000484704 ARF1P84077 181 aaKnown RBP13.16□□□□□ -0.3
HLA-F-226ENST00000484704 MXRA7P84157 204 aa13.16□□□□□ -0.3
HLA-F-226ENST00000484704 PIN1Q13526 163 aaPredicted RBP13.16□□□□□ -0.3
HLA-F-226ENST00000484704 ZNF74Q16587 644 aa13.16□□□□□ -0.3
HLA-F-226ENST00000484704 CEACAM16Q2WEN9 425 aa13.16□□□□□ -0.3
HLA-F-226ENST00000484704 ANKRD16Q6P6B7 361 aa13.16□□□□□ -0.3
HLA-F-226ENST00000484704 LINC00114Q6XXX2 140 aa13.16□□□□□ -0.3
HLA-F-226ENST00000484704 HACD2Q6Y1H2 254 aa13.16□□□□□ -0.3
HLA-F-226ENST00000484704 WDR88Q6ZMY6 472 aa13.16□□□□□ -0.3
HLA-F-226ENST00000484704 FBXL14Q8N1E6 418 aa13.16□□□□□ -0.3
HLA-F-226ENST00000484704 WDR31Q8NA23 367 aa13.16□□□□□ -0.3
HLA-F-226ENST00000484704 OR2M2Q96R28 347 aa13.16□□□□□ -0.3
HLA-F-226ENST00000484704 EMC6Q9BV81 110 aa13.16□□□□□ -0.3
HLA-F-226ENST00000484704 CRLF2Q9HC73 371 aa13.16□□□□□ -0.3
HLA-F-226ENST00000484704 GPR35Q9HC97 309 aa13.16□□□□□ -0.3
HLA-F-226ENST00000484704 POFUT2Q9Y2G5 429 aa13.16□□□□□ -0.3
HLA-F-226ENST00000484704 HEATR1Q9H583 2144 aaKnown RBP13.15□□□□□ -0.3
HLA-F-226ENST00000484704 SLC35F4A4IF30 521 aa13.15□□□□□ -0.3
HLA-F-226ENST00000484704 BLOC1S5-TXNDC5H3BN57 136 aa13.15□□□□□ -0.3
HLA-F-226ENST00000484704 NME4O00746 187 aa13.15□□□□□ -0.3
HLA-F-226ENST00000484704 TRAF3IP2O43734 574 aaPredicted RBP13.15□□□□□ -0.3
HLA-F-226ENST00000484704 FZD7O75084 574 aa13.15□□□□□ -0.3
HLA-F-226ENST00000484704 DCTN3O75935 186 aa13.15□□□□□ -0.3
HLA-F-226ENST00000484704 HPRP00739 348 aa13.15□□□□□ -0.3
HLA-F-226ENST00000484704 THY1P04216 161 aa13.15□□□□□ -0.3
HLA-F-226ENST00000484704 IFNW1P05000 195 aa13.15□□□□□ -0.3
HLA-F-226ENST00000484704 HEXAP06865 529 aa13.15□□□□□ -0.3
HLA-F-226ENST00000484704 RBM34P42696 430 aaKnown RBP13.15□□□□□ -0.3
HLA-F-226ENST00000484704 GSK3BP49841 420 aa13.15□□□□□ -0.3
HLA-F-226ENST00000484704 BIDP55957 195 aa13.15□□□□□ -0.3
HLA-F-226ENST00000484704 TUBA1BP68363 451 aa13.15□□□□□ -0.3
HLA-F-226ENST00000484704 TUBA4AP68366 448 aa13.15□□□□□ -0.3
HLA-F-226ENST00000484704 ST3GAL3Q11203 375 aa13.15□□□□□ -0.3
HLA-F-226ENST00000484704 CAMK2DQ13557 499 aa13.15□□□□□ -0.3
HLA-F-226ENST00000484704 AGAP6Q5VW22 663 aa13.15□□□□□ -0.3
HLA-F-226ENST00000484704 SEZ6L2Q6UXD5 910 aa13.15□□□□□ -0.3
HLA-F-226ENST00000484704 TUBA1AQ71U36 451 aa13.15□□□□□ -0.3
HLA-F-226ENST00000484704 PXKQ7Z7A4 578 aa13.15□□□□□ -0.3
HLA-F-226ENST00000484704 ANKK1Q8NFD2 765 aa13.15□□□□□ -0.3
HLA-F-226ENST00000484704 LILRB1Q8NHL6 650 aaPredicted RBP13.15□□□□□ -0.3
HLA-F-226ENST00000484704 TMEM255BQ8WV15 326 aa13.15□□□□□ -0.3
HLA-F-226ENST00000484704 TMEM239Q8WW34 195 aa13.15□□□□□ -0.3
HLA-F-226ENST00000484704 SGTBQ96EQ0 304 aa13.15□□□□□ -0.3
HLA-F-226ENST00000484704 TXNDC15Q96J42 360 aa13.15□□□□□ -0.3
HLA-F-226ENST00000484704 HS6ST2Q96MM7 605 aa13.15□□□□□ -0.3
HLA-F-226ENST00000484704 GSX2Q9BZM3 304 aa13.15□□□□□ -0.3
HLA-F-226ENST00000484704 ULBP2Q9BZM5 246 aa13.15□□□□□ -0.3
HLA-F-226ENST00000484704 MYLK2Q9H1R3 596 aa13.15□□□□□ -0.3
HLA-F-226ENST00000484704 MOV10Q9HCE1 1003 aaKnown RBP13.15□□□□□ -0.3
HLA-F-226ENST00000484704 SPAG4Q9NPE6 437 aa13.15□□□□□ -0.3
HLA-F-226ENST00000484704 ZNF229Q9UJW7 825 aa13.15□□□□□ -0.3
HLA-F-226ENST00000484704 ARL2BPQ9Y2Y0 163 aa13.15□□□□□ -0.3
HLA-F-226ENST00000484704 MED31Q9Y3C7 131 aa13.15□□□□□ -0.3
HLA-F-226ENST00000484704 FBN3Q75N90 2809 aa13.14□□□□□ -0.31
HLA-F-226ENST00000484704 RAI1Q7Z5J4 1906 aaPredicted RBP13.14□□□□□ -0.31
HLA-F-226ENST00000484704 SHISA9B4DS77 424 aa13.14□□□□□ -0.31
HLA-F-226ENST00000484704 MCIDASD6RGH6 385 aa13.14□□□□□ -0.31
HLA-F-226ENST00000484704 DYNC1I1O14576 645 aa13.14□□□□□ -0.31
HLA-F-226ENST00000484704 ZNF432O94892 652 aa13.14□□□□□ -0.31
HLA-F-226ENST00000484704 LYPD3O95274 346 aa13.14□□□□□ -0.31
HLA-F-226ENST00000484704 SERPINA1P01009 418 aa13.14□□□□□ -0.31
HLA-F-226ENST00000484704 MT-ND1P03886 318 aa13.14□□□□□ -0.31
HLA-F-226ENST00000484704 THRBP10828 461 aa13.14□□□□□ -0.31
HLA-F-226ENST00000484704 IFNGR1P15260 489 aa13.14□□□□□ -0.31
HLA-F-226ENST00000484704 FUT1P19526 365 aa13.14□□□□□ -0.31
HLA-F-226ENST00000484704 PCSK6P29122 969 aa13.14□□□□□ -0.31
HLA-F-226ENST00000484704 YAP1P46937 504 aaKnown RBP13.14□□□□□ -0.31
HLA-F-226ENST00000484704 CSNK1A1P48729 337 aa13.14□□□□□ -0.31
HLA-F-226ENST00000484704 FABP6P51161 128 aa13.14□□□□□ -0.31
HLA-F-226ENST00000484704 SLC25A3Q00325 362 aa13.14□□□□□ -0.31
HLA-F-226ENST00000484704 SPOCK1Q08629 439 aa13.14□□□□□ -0.31
HLA-F-226ENST00000484704 IFI44LQ53G44 452 aa13.14□□□□□ -0.31
HLA-F-226ENST00000484704 SLC35D2Q76EJ3 337 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms