RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 GYG1P46976 350 aa3.64□□□□□ -1.83
SF3B1-210ENST00000482158 TPMTP51580 245 aa3.64□□□□□ -1.83
SF3B1-210ENST00000482158 PSG5Q15238 335 aa3.64□□□□□ -1.83
SF3B1-210ENST00000482158 IMMTQ16891 758 aaKnown RBP3.64□□□□□ -1.83
SF3B1-210ENST00000482158 FRMPD2BQ6IN97 320 aa3.64□□□□□ -1.83
SF3B1-210ENST00000482158 TRIM40Q6P9F5 258 aa3.64□□□□□ -1.83
SF3B1-210ENST00000482158 LRRC31Q6UY01 552 aa3.64□□□□□ -1.83
SF3B1-210ENST00000482158 SLC25A48Q6ZT89 311 aaKnown RBP3.64□□□□□ -1.83
SF3B1-210ENST00000482158 UTS2BQ765I0 119 aa3.64□□□□□ -1.83
SF3B1-210ENST00000482158 ZNF429Q86V71 674 aa3.64□□□□□ -1.83
SF3B1-210ENST00000482158 EGFL6Q8IUX8 553 aa3.64□□□□□ -1.83
SF3B1-210ENST00000482158 PSTKQ8IV42 348 aaKnown RBP3.64□□□□□ -1.83
SF3B1-210ENST00000482158 ZADH2Q8N4Q0 377 aa3.64□□□□□ -1.83
SF3B1-210ENST00000482158 ARIH2OSQ8N7S6 290 aa3.64□□□□□ -1.83
SF3B1-210ENST00000482158 Q8N9W7 124 aa3.64□□□□□ -1.83
SF3B1-210ENST00000482158 VN1R2Q8NFZ6 395 aa3.64□□□□□ -1.83
SF3B1-210ENST00000482158 OR2L3Q8NG85 312 aa3.64□□□□□ -1.83
SF3B1-210ENST00000482158 OR4F15Q8NGB8 312 aa3.64□□□□□ -1.83
SF3B1-210ENST00000482158 TMEM158Q8WZ71 300 aa3.64□□□□□ -1.83
SF3B1-210ENST00000482158 TUBGCP3Q96CW5 907 aa3.64□□□□□ -1.83
SF3B1-210ENST00000482158 RIOK1Q9BRS2 568 aaKnown RBP3.64□□□□□ -1.83
SF3B1-210ENST00000482158 ZFP14Q9HCL3 533 aa3.64□□□□□ -1.83
SF3B1-210ENST00000482158 ADAP2Q9NPF8 381 aa3.64□□□□□ -1.83
SF3B1-210ENST00000482158 SLC25A37Q9NYZ2 338 aa3.64□□□□□ -1.83
SF3B1-210ENST00000482158 SPATA7Q9P0W8 599 aa3.64□□□□□ -1.83
SF3B1-210ENST00000482158 CDHR2Q9BYE9 1310 aa3.64□□□□□ -1.83
SF3B1-210ENST00000482158 IGHV3-64DA0A0J9YX35 117 aa3.63□□□□□ -1.83
SF3B1-210ENST00000482158 A0A1W2PNU3 283 aaPredicted RBP3.63□□□□□ -1.83
SF3B1-210ENST00000482158 ERVV-1B6SEH8 477 aa3.63□□□□□ -1.83
SF3B1-210ENST00000482158 PCCAP05165 728 aaPredicted RBP3.63□□□□□ -1.83
SF3B1-210ENST00000482158 TOP1P11387 765 aaKnown RBP3.63□□□□□ -1.83
SF3B1-210ENST00000482158 YAP1P46937 504 aaKnown RBP3.63□□□□□ -1.83
SF3B1-210ENST00000482158 ERVK-25P63136 954 aa3.63□□□□□ -1.83
SF3B1-210ENST00000482158 FZD2Q14332 565 aa3.63□□□□□ -1.83
SF3B1-210ENST00000482158 LRRC10Q5BKY1 277 aa3.63□□□□□ -1.83
SF3B1-210ENST00000482158 Q6P435 159 aa3.63□□□□□ -1.83
SF3B1-210ENST00000482158 TGIF2LXQ8IUE1 241 aa3.63□□□□□ -1.83
SF3B1-210ENST00000482158 OR4F6Q8NGB9 312 aa3.63□□□□□ -1.83
SF3B1-210ENST00000482158 FBXO32Q969P5 355 aa3.63□□□□□ -1.83
SF3B1-210ENST00000482158 OR8B4Q96RC9 309 aa3.63□□□□□ -1.83
SF3B1-210ENST00000482158 METTL7AQ9H8H3 244 aa3.63□□□□□ -1.83
SF3B1-210ENST00000482158 NT5MQ9NPB1 228 aa3.63□□□□□ -1.83
SF3B1-210ENST00000482158 GLRX2Q9NS18 164 aa3.63□□□□□ -1.83
SF3B1-210ENST00000482158 LRP4O75096 1905 aa3.63□□□□□ -1.83
SF3B1-210ENST00000482158 PPIAL4EA0A075B759 164 aa3.62□□□□□ -1.83
SF3B1-210ENST00000482158 TRBV6-6A0A0A6YYG2 114 aa3.62□□□□□ -1.83
SF3B1-210ENST00000482158 IGKV1D-13A0A0B4J2D9 117 aa3.62□□□□□ -1.83
SF3B1-210ENST00000482158 NKX2-6A6NCS4 301 aa3.62□□□□□ -1.83
SF3B1-210ENST00000482158 CCDC182A6NF36 153 aa3.62□□□□□ -1.83
SF3B1-210ENST00000482158 CA11O75493 328 aa3.62□□□□□ -1.83
SF3B1-210ENST00000482158 TMEM50AO95807 157 aa3.62□□□□□ -1.83
SF3B1-210ENST00000482158 PPIAL4FP0DN26 164 aa3.62□□□□□ -1.83
SF3B1-210ENST00000482158 IGKV1-13P0DP09 117 aa3.62□□□□□ -1.83
SF3B1-210ENST00000482158 KITLGP21583 273 aa3.62□□□□□ -1.83
SF3B1-210ENST00000482158 CSNK1DP48730 415 aa3.62□□□□□ -1.83
SF3B1-210ENST00000482158 FGF8P55075 233 aaPredicted RBP3.62□□□□□ -1.83
SF3B1-210ENST00000482158 LCN12Q6JVE5 192 aa3.62□□□□□ -1.83
SF3B1-210ENST00000482158 MDS2Q8NDY4 140 aa3.62□□□□□ -1.83
SF3B1-210ENST00000482158 OR10G9Q8NGN4 311 aa3.62□□□□□ -1.83
SF3B1-210ENST00000482158 OR6X1Q8NH79 312 aa3.62□□□□□ -1.83
SF3B1-210ENST00000482158 SORT1Q99523 831 aa3.62□□□□□ -1.83
SF3B1-210ENST00000482158 SLC25A39Q9BZJ4 359 aaPredicted RBP3.62□□□□□ -1.83
SF3B1-210ENST00000482158 MFFQ9GZY8 342 aa3.62□□□□□ -1.83
SF3B1-210ENST00000482158 HPCAL4Q9UM19 191 aa3.62□□□□□ -1.83
SF3B1-210ENST00000482158 A0A0U1RQS6 177 aa3.61□□□□□ -1.83
SF3B1-210ENST00000482158 MPHOSPH10O00566 681 aaKnown RBP3.61□□□□□ -1.83
SF3B1-210ENST00000482158 SLC31A2O15432 143 aa3.61□□□□□ -1.83
SF3B1-210ENST00000482158 UPK3AO75631 287 aa3.61□□□□□ -1.83
SF3B1-210ENST00000482158 ALDOBP05062 364 aa3.61□□□□□ -1.83
SF3B1-210ENST00000482158 HOXC4P09017 264 aaPredicted RBP3.61□□□□□ -1.83
SF3B1-210ENST00000482158 CCR6P51684 374 aa3.61□□□□□ -1.83
SF3B1-210ENST00000482158 RSPO1Q2MKA7 263 aaPredicted RBP3.61□□□□□ -1.83
SF3B1-210ENST00000482158 RABL6Q3YEC7 729 aaPredicted RBP3.61□□□□□ -1.83
SF3B1-210ENST00000482158 RUFY3Q7L099 469 aa3.61□□□□□ -1.83
SF3B1-210ENST00000482158 NBPF5PQ86XG9 351 aaPredicted RBP3.61□□□□□ -1.83
SF3B1-210ENST00000482158 ZNF557Q8N988 423 aaPredicted RBP3.61□□□□□ -1.83
SF3B1-210ENST00000482158 OR51G1Q8NGK1 321 aa3.61□□□□□ -1.83
SF3B1-210ENST00000482158 CLMPQ9H6B4 373 aa3.61□□□□□ -1.83
SF3B1-210ENST00000482158 UGT1A7Q9HAW7 530 aa3.61□□□□□ -1.83
SF3B1-210ENST00000482158 UGT1A10Q9HAW8 530 aa3.61□□□□□ -1.83
SF3B1-210ENST00000482158 UGT1A8Q9HAW9 530 aa3.61□□□□□ -1.83
SF3B1-210ENST00000482158 DMAP1Q9NPF5 467 aaPredicted RBP3.61□□□□□ -1.83
SF3B1-210ENST00000482158 F11RQ9Y624 299 aaKnown RBP3.61□□□□□ -1.83
SF3B1-210ENST00000482158 WSB1Q9Y6I7 421 aa3.61□□□□□ -1.83
SF3B1-210ENST00000482158 PDS5BQ9NTI5 1447 aa3.61□□□□□ -1.83
SF3B1-210ENST00000482158 CCL21O00585 134 aa3.6□□□□□ -1.83
SF3B1-210ENST00000482158 GKN3PP0CG01 181 aa3.6□□□□□ -1.83
SF3B1-210ENST00000482158 TCN1P20061 433 aaPredicted RBP3.6□□□□□ -1.83
SF3B1-210ENST00000482158 SSR1P43307 286 aaKnown RBP3.6□□□□□ -1.83
SF3B1-210ENST00000482158 CRYBB2P43320 205 aa3.6□□□□□ -1.83
SF3B1-210ENST00000482158 GPR6P46095 362 aaPredicted RBP3.6□□□□□ -1.83
SF3B1-210ENST00000482158 FBXW4P57775 412 aa3.6□□□□□ -1.83
SF3B1-210ENST00000482158 PLP1P60201 277 aa3.6□□□□□ -1.83
SF3B1-210ENST00000482158 ACTR3P61158 418 aa3.6□□□□□ -1.83
SF3B1-210ENST00000482158 SGCAQ16586 387 aa3.6□□□□□ -1.83
SF3B1-210ENST00000482158 GUCA2BQ16661 112 aa3.6□□□□□ -1.83
SF3B1-210ENST00000482158 PRAMEF5Q5TYX0 476 aa3.6□□□□□ -1.83
SF3B1-210ENST00000482158 PRAMEF6Q5VXH4 476 aa3.6□□□□□ -1.83
SF3B1-210ENST00000482158 CNIH2Q6PI25 160 aa3.6□□□□□ -1.83
SF3B1-210ENST00000482158 PUSL1Q8N0Z8 303 aaKnown RBP3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms