RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 GABREP78334 506 aa8.74□□□□□ -1.01
GARNL3-216ENST00000481242 ARHGAP11BQ3KRB8 267 aa8.74□□□□□ -1.01
GARNL3-216ENST00000481242 SLC22A6Q4U2R8 563 aa8.74□□□□□ -1.01
GARNL3-216ENST00000481242 LRRC28Q86X40 367 aaPredicted RBP8.74□□□□□ -1.01
GARNL3-216ENST00000481242 PBDC1Q9BVG4 233 aa8.74□□□□□ -1.01
GARNL3-216ENST00000481242 CHRNA9Q9UGM1 479 aa8.74□□□□□ -1.01
GARNL3-216ENST00000481242 RASD1Q9Y272 281 aa8.74□□□□□ -1.01
GARNL3-216ENST00000481242 SSC5DA1L4H1 1573 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 MCRIP1C9JLW8 97 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 GAPDHSO14556 408 aaPredicted RBP8.73□□□□□ -1.01
GARNL3-216ENST00000481242 MBTPS2O43462 519 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 FZD7O75084 574 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 PTGER1P34995 402 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 LSSP48449 732 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 SUMO3P55854 103 aaPredicted RBP8.73□□□□□ -1.01
GARNL3-216ENST00000481242 TBC1D28Q2M2D7 210 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 CCSMST1Q4G0I0 132 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 ZNF628Q5EBL2 1059 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 OR2T11Q8NH01 316 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 TOMM40LQ969M1 308 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 TNFRSF13CQ96RJ3 184 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 CALHM2Q9HA72 323 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 NTN4Q9HB63 628 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 MAN2C1Q9NTJ4 1040 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 TMEM30AQ9NV96 361 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 VSX1Q9NZR4 365 aaPredicted RBP8.73□□□□□ -1.01
GARNL3-216ENST00000481242 RHBDD3Q9Y3P4 386 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 IFNA4P05014 189 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 BCL2A1Q16548 175 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 METAP1DQ6UB28 335 aaPredicted RBP8.73□□□□□ -1.01
GARNL3-216ENST00000481242 FAM57BQ71RH2 274 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 BRIX1Q8TDN6 353 aaKnown RBP8.73□□□□□ -1.01
GARNL3-216ENST00000481242 CNOT9Q92600 299 aaKnown RBP8.73□□□□□ -1.01
GARNL3-216ENST00000481242 MSI2Q96DH6 328 aaKnown RBP8.73□□□□□ -1.01
GARNL3-216ENST00000481242 LAT2Q9GZY6 243 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 NXF5Q9H1B4 397 aaKnown RBP8.73□□□□□ -1.01
GARNL3-216ENST00000481242 ERVMER34-1Q9H9K5 563 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 ERVK13-1Q9NX77 482 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 STEAP1Q9UHE8 339 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 LOXHD1Q8IVV2 1947 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 PRAMEF27A3QJZ7 478 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 RGS13O14921 159 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 LINC01565O15544 149 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 KLK8O60259 260 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 TNFSF15O95150 251 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 CRYABP02511 175 aaKnown RBP8.73□□□□□ -1.01
GARNL3-216ENST00000481242 OPN1LWP04000 364 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 OPRL1P41146 370 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 TAS2R19P59542 299 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 SIRPAP78324 504 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 IL11RAQ14626 422 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 EMC4Q5J8M3 183 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 LPCAT3Q6P1A2 487 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 NKAIN3Q8N8D7 197 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 OR4N2Q8NGD1 307 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 CSF3RQ99062 836 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 PLEKHA3Q9HB20 300 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 GFOD1Q9NXC2 390 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 CD300LBA8K4G0 201 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 RGS11O94810 467 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 APOC3P02656 99 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 FBXO45P0C2W1 286 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 ZNF26P17031 533 aaPredicted RBP8.73□□□□□ -1.01
GARNL3-216ENST00000481242 IL3RAP26951 378 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 BDKRB2P30411 391 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 KIR2DL3P43628 341 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 RAB5CP51148 216 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 MTCP1P56278 107 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 ZNF92Q03936 586 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 NPSR1Q6W5P4 371 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 WBP2Q969T9 261 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 TIMD4Q96H15 378 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 C14orf119Q9NWQ9 140 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 PPIL1Q9Y3C6 166 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 FBXO7Q9Y3I1 522 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 A3GALT2U3KPV4 340 aa8.73□□□□□ -1.01
GARNL3-216ENST00000481242 TSPAN11A1L157 253 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 HMX2A2RU54 273 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 NKX6-3A6NJ46 265 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 M0R036 132 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 DVL2O14641 736 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 LYRM1O43325 122 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 GATCO43716 136 aaKnown RBP8.72□□□□□ -1.01
GARNL3-216ENST00000481242 PIAS2O75928 621 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 TAS2R20P59543 309 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 SEC61A1P61619 476 aaKnown RBP8.72□□□□□ -1.01
GARNL3-216ENST00000481242 SF3A2Q15428 464 aaKnown RBP8.72□□□□□ -1.01
GARNL3-216ENST00000481242 TSSK4Q6SA08 328 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 MAVSQ7Z434 540 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 LILRB2Q8N423 598 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 C11orf40Q8WZ69 217 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 HRASLS5Q96KN8 279 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 NUDT22Q9BRQ3 303 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 CD300AQ9UGN4 299 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 PPT2Q9UMR5 302 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 NUBP2Q9Y5Y2 271 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 MICAL3Q7RTP6 2002 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 ARAP2Q8WZ64 1704 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 TRBV4-1A0A0J9YWV2 114 aa8.72□□□□□ -1.01
GARNL3-216ENST00000481242 FAM183AA6NL82 134 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms