RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 RNF186Q9NXI6 227 aa8.87□□□□□ -0.99
VEGFA-212ENST00000480614 SPHK1Q9NYA1 384 aa8.87□□□□□ -0.99
VEGFA-212ENST00000480614 RNF24Q9Y225 148 aa8.87□□□□□ -0.99
VEGFA-212ENST00000480614 CEPT1Q9Y6K0 416 aa8.87□□□□□ -0.99
VEGFA-212ENST00000480614 RAD1O60671 282 aa8.87□□□□□ -0.99
VEGFA-212ENST00000480614 PRAMEF4O60810 478 aa8.87□□□□□ -0.99
VEGFA-212ENST00000480614 GAB1Q13480 694 aa8.87□□□□□ -0.99
VEGFA-212ENST00000480614 LIPIQ6XZB0 460 aa8.87□□□□□ -0.99
VEGFA-212ENST00000480614 A0A0A6YYC8 382 aaPredicted RBP8.87□□□□□ -0.99
VEGFA-212ENST00000480614 ZCWPW2A0A1B0GU75 182 aa8.87□□□□□ -0.99
VEGFA-212ENST00000480614 I3L1I5 382 aaPredicted RBP8.87□□□□□ -0.99
VEGFA-212ENST00000480614 SYT5O00445 386 aa8.87□□□□□ -0.99
VEGFA-212ENST00000480614 GPR171O14626 319 aa8.87□□□□□ -0.99
VEGFA-212ENST00000480614 HOXB5P09067 269 aa8.87□□□□□ -0.99
VEGFA-212ENST00000480614 LCN10Q6JVE6 187 aa8.87□□□□□ -0.99
VEGFA-212ENST00000480614 RHBDD1Q8TEB9 315 aa8.87□□□□□ -0.99
VEGFA-212ENST00000480614 MOCOSQ96EN8 888 aa8.87□□□□□ -0.99
VEGFA-212ENST00000480614 PIGQQ9BRB3 760 aa8.87□□□□□ -0.99
VEGFA-212ENST00000480614 PGAP2Q9UHJ9 254 aa8.87□□□□□ -0.99
VEGFA-212ENST00000480614 CASP8AP2Q9UKL3 1982 aa8.87□□□□□ -0.99
VEGFA-212ENST00000480614 SQSTM1Q13501 440 aa8.87□□□□□ -0.99
VEGFA-212ENST00000480614 HTR3DQ70Z44 454 aa8.87□□□□□ -0.99
VEGFA-212ENST00000480614 HSD11B1LQ7Z5J1 315 aa8.87□□□□□ -0.99
VEGFA-212ENST00000480614 CD163Q86VB7 1156 aa8.87□□□□□ -0.99
VEGFA-212ENST00000480614 OR52E1Q8NGJ3 308 aa8.87□□□□□ -0.99
VEGFA-212ENST00000480614 H0YGG7 62 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 GABRPO00591 440 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 CTXN2P0C2S0 81 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 ACSM1Q08AH1 577 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 C12orf76Q8N812 135 aaPredicted RBP8.86□□□□□ -0.99
VEGFA-212ENST00000480614 SDR9C7Q8NEX9 313 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 PSD2Q9BQI7 771 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 ZNF732B4DXR9 585 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 PMS2P2O95744 297 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 SLC9A3R2Q15599 337 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 MRPL2Q5T653 305 aaKnown RBP8.86□□□□□ -0.99
VEGFA-212ENST00000480614 NEURL3Q96EH8 262 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 HDAC8Q9BY41 377 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 OR8U8P0C7N1 319 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 ARAFP10398 606 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 CYBAP13498 195 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 PSMB10P40306 273 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 PLK5Q496M5 336 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 CDHR3Q6ZTQ4 885 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 SLC39A11Q8N1S5 342 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 ZNF439Q8NDP4 499 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 SLC25A43Q8WUT9 341 aaPredicted RBP8.86□□□□□ -0.99
VEGFA-212ENST00000480614 IP6K3Q96PC2 410 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 ABHD6Q9BV23 337 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 FN3KRPQ9HA64 309 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 PISDQ9UG56 409 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 TRAV36DV7A0A075B6V5 113 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 FBXO45P0C2W1 286 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 ZNF761Q86XN6 746 aaPredicted RBP8.86□□□□□ -0.99
VEGFA-212ENST00000480614 TEX19Q8NA77 164 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 M1APQ8TC57 530 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 SECTM1Q8WVN6 248 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 LINC01599Q8WXQ3 324 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 CPNE4Q96A23 557 aaPredicted RBP8.86□□□□□ -0.99
VEGFA-212ENST00000480614 SMIM3Q9BZL3 60 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 LMAN1LQ9HAT1 526 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 SPG11Q96JI7 2443 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 NXPH2O95156 264 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 GPLD1P80108 840 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 ZFPM2Q8WW38 1151 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 ENSAO43768 121 aaKnown RBP8.86□□□□□ -0.99
VEGFA-212ENST00000480614 ABHD16AO95870 558 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 ANXA7P20073 488 aaKnown RBP8.86□□□□□ -0.99
VEGFA-212ENST00000480614 PSMB1P20618 241 aaKnown RBP8.86□□□□□ -0.99
VEGFA-212ENST00000480614 CNR1P21554 472 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 PRDX1Q06830 199 aaKnown RBP8.86□□□□□ -0.99
VEGFA-212ENST00000480614 NPSR1Q6W5P4 371 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 SLC35G3Q8N808 338 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 OR6M1Q8NGM8 313 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 KCND3Q9UK17 655 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 NSA2O95478 260 aaKnown RBP8.86□□□□□ -0.99
VEGFA-212ENST00000480614 GABRA4P48169 554 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 EXOSC7Q15024 291 aaKnown RBP8.86□□□□□ -0.99
VEGFA-212ENST00000480614 PCK2Q16822 640 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 OR13C2Q8NGS9 318 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 LGALS14Q8TCE9 139 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 SCPEP1Q9HB40 452 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 IMPA2O14732 288 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 BMI1P35226 326 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 RNF4P78317 190 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 SHEQ5VZ18 495 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 KDM8Q8N371 416 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 KLF16Q9BXK1 252 aaPredicted RBP8.86□□□□□ -0.99
VEGFA-212ENST00000480614 MMP28Q9H239 520 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 SLC16A6O15403 523 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 FADS1O60427 444 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 AIFM1O95831 613 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 SOX4Q06945 474 aaPredicted RBP8.86□□□□□ -0.99
VEGFA-212ENST00000480614 CBLL1Q75N03 491 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 B3GNT8Q7Z7M8 397 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 BAGE3Q86Y29 109 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 BAGE2Q86Y30 109 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 PRSS35Q8N3Z0 413 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 CLDN22Q8N7P3 220 aa8.86□□□□□ -0.99
VEGFA-212ENST00000480614 ASB13Q8WXK3 278 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms