RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 FARS2O95363 451 aaKnown RBP6.16□□□□□ -1.42
COL17A1-205ENST00000480127 TGFAP01135 160 aa6.16□□□□□ -1.42
COL17A1-205ENST00000480127 DAOP14920 347 aa6.16□□□□□ -1.42
COL17A1-205ENST00000480127 ETS2P15036 469 aa6.16□□□□□ -1.42
COL17A1-205ENST00000480127 IFNGR1P15260 489 aa6.16□□□□□ -1.42
COL17A1-205ENST00000480127 CD247P20963 164 aa6.16□□□□□ -1.42
COL17A1-205ENST00000480127 DRD4P21917 467 aa6.16□□□□□ -1.42
COL17A1-205ENST00000480127 CFPP27918 469 aa6.16□□□□□ -1.42
COL17A1-205ENST00000480127 IFNA8P32881 189 aa6.16□□□□□ -1.42
COL17A1-205ENST00000480127 NTF4P34130 210 aa6.16□□□□□ -1.42
COL17A1-205ENST00000480127 ACAA2P42765 397 aaKnown RBP6.16□□□□□ -1.42
COL17A1-205ENST00000480127 GUCA1AP43080 201 aaPredicted RBP6.16□□□□□ -1.42
COL17A1-205ENST00000480127 PTDSS1P48651 473 aaKnown RBP6.16□□□□□ -1.42
COL17A1-205ENST00000480127 CSNK1A1P48729 337 aa6.16□□□□□ -1.42
COL17A1-205ENST00000480127 SLC18A1P54219 525 aa6.16□□□□□ -1.42
COL17A1-205ENST00000480127 SLC25A3Q00325 362 aa6.16□□□□□ -1.42
COL17A1-205ENST00000480127 NAAAQ02083 359 aa6.16□□□□□ -1.42
COL17A1-205ENST00000480127 PIGFQ07326 219 aa6.16□□□□□ -1.42
COL17A1-205ENST00000480127 PUDPQ08623 228 aa6.16□□□□□ -1.42
COL17A1-205ENST00000480127 NFYCQ13952 458 aa6.16□□□□□ -1.42
COL17A1-205ENST00000480127 SQLEQ14534 574 aa6.16□□□□□ -1.42
COL17A1-205ENST00000480127 OR1Q1Q15612 314 aa6.16□□□□□ -1.42
COL17A1-205ENST00000480127 ADRM1Q16186 407 aa6.16□□□□□ -1.42
COL17A1-205ENST00000480127 NKPD1Q17RQ9 610 aa6.16□□□□□ -1.42
COL17A1-205ENST00000480127 GSG1Q2KHT4 349 aa6.16□□□□□ -1.42
COL17A1-205ENST00000480127 INTS11Q5TA45 600 aaKnown RBP6.16□□□□□ -1.42
COL17A1-205ENST00000480127 AGBL2Q5U5Z8 902 aa6.16□□□□□ -1.42
COL17A1-205ENST00000480127 TTC33Q6PID6 262 aaPredicted RBP6.16□□□□□ -1.42
COL17A1-205ENST00000480127 EPGNQ6UW88 154 aa6.16□□□□□ -1.42
COL17A1-205ENST00000480127 DHDDSQ86SQ9 333 aa6.16□□□□□ -1.42
COL17A1-205ENST00000480127 MDP1Q86V88 176 aa6.16□□□□□ -1.42
COL17A1-205ENST00000480127 MEX3DQ86XN8 651 aaKnown RBP6.16□□□□□ -1.42
COL17A1-205ENST00000480127 SMYD1Q8NB12 490 aa6.16□□□□□ -1.42
COL17A1-205ENST00000480127 IL17RDQ8NFM7 739 aa6.16□□□□□ -1.42
COL17A1-205ENST00000480127 SNX33Q8WV41 574 aa6.16□□□□□ -1.42
COL17A1-205ENST00000480127 CKAP2Q8WWK9 683 aa6.16□□□□□ -1.42
COL17A1-205ENST00000480127 GTF2H4Q92759 462 aa6.16□□□□□ -1.42
COL17A1-205ENST00000480127 TAAR8Q969N4 342 aa6.16□□□□□ -1.42
COL17A1-205ENST00000480127 C7orf26Q96N11 449 aa6.16□□□□□ -1.42
COL17A1-205ENST00000480127 SNX18Q96RF0 628 aa6.16□□□□□ -1.42
COL17A1-205ENST00000480127 PAIP1Q9H074 479 aaKnown RBP6.16□□□□□ -1.42
COL17A1-205ENST00000480127 LRMDAQ9H2I8 198 aa6.16□□□□□ -1.42
COL17A1-205ENST00000480127 KCNN2Q9H2S1 579 aa6.16□□□□□ -1.42
COL17A1-205ENST00000480127 GPR35Q9HC97 309 aa6.16□□□□□ -1.42
COL17A1-205ENST00000480127 BCL2L10Q9HD36 194 aa6.16□□□□□ -1.42
COL17A1-205ENST00000480127 GPR160Q9UJ42 338 aa6.16□□□□□ -1.42
COL17A1-205ENST00000480127 LEF1Q9UJU2 399 aaPredicted RBP6.16□□□□□ -1.42
COL17A1-205ENST00000480127 ARPC4-TTLL3A0A0A6YYG9 625 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 IGHV4-61A0A0C4DH41 118 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 CPSF4LA6NMK7 179 aaKnown RBP6.15□□□□□ -1.42
COL17A1-205ENST00000480127 ZNF99A8MXY4 864 aaPredicted RBP6.15□□□□□ -1.42
COL17A1-205ENST00000480127 M0R233 179 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 PDLIM1O00151 329 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 ZNF432O94892 652 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 HLA-HP01893 362 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 MT-ND5P03915 603 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 OPN1SWP03999 348 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 ADRA2AP08913 450 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 ARAFP10398 606 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 HOXB1P14653 301 aaPredicted RBP6.15□□□□□ -1.42
COL17A1-205ENST00000480127 B4GALT1P15291 398 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 ITGA2P17301 1181 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 PCMT1P22061 227 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 APEX1P27695 318 aaKnown RBP6.15□□□□□ -1.42
COL17A1-205ENST00000480127 NR4A2P43354 598 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 IDH3AP50213 366 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 ZNF84P51523 738 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 CHN2P52757 468 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 CDH15P55291 814 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 CLRN1P58418 232 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 PLP2Q04941 152 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 SCGB2A2Q13296 93 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 CAMK2DQ13557 499 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 CCNIQ14094 377 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 ADIPOQQ15848 244 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 MST1LQ2TV78 715 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 FAM91A1Q658Y4 838 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 REP15Q6BDI9 236 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 TMEM53Q6P2H8 277 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 TMEM154Q6P9G4 183 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 DHRS4L2Q6PKH6 230 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 BLOC1S3Q6QNY0 202 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 HDDC2Q7Z4H3 204 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 NANOGNBQ7Z5D8 188 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 LSRQ86X29 649 aaPredicted RBP6.15□□□□□ -1.42
COL17A1-205ENST00000480127 EPHX4Q8IUS5 362 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 SLC30A8Q8IWU4 369 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 RFLNBQ8N5W9 214 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 ZIC4Q8N9L1 334 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 NEU4Q8WWR8 484 aaPredicted RBP6.15□□□□□ -1.42
COL17A1-205ENST00000480127 BCL2L2Q92843 193 aaPredicted RBP6.15□□□□□ -1.42
COL17A1-205ENST00000480127 SLC35B4Q969S0 331 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 MAELQ96JY0 434 aaKnown RBP6.15□□□□□ -1.42
COL17A1-205ENST00000480127 ATP6V1G3Q96LB4 118 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 FOXN4Q96NZ1 517 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 SORCS2Q96PQ0 1159 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 OR2M2Q96R28 347 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 MCHR1Q99705 422 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 ECSITQ9BQ95 431 aa6.15□□□□□ -1.42
COL17A1-205ENST00000480127 SOX7Q9BT81 388 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms