RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 ADAP2Q9NPF8 381 aa3.33□□□□□ -1.88
CCDC58-204ENST00000479414 SPATA7Q9P0W8 599 aa3.33□□□□□ -1.88
CCDC58-204ENST00000479414 XCL2Q9UBD3 114 aa3.33□□□□□ -1.88
CCDC58-204ENST00000479414 ZNF223Q9UK11 482 aaPredicted RBP3.33□□□□□ -1.88
CCDC58-204ENST00000479414 PIKFYVEQ9Y2I7 2098 aa3.32□□□□□ -1.88
CCDC58-204ENST00000479414 IGKV1D-13A0A0B4J2D9 117 aa3.32□□□□□ -1.88
CCDC58-204ENST00000479414 C12orf71A8MTZ7 269 aa3.32□□□□□ -1.88
CCDC58-204ENST00000479414 ANKRD63C9JTQ0 380 aa3.32□□□□□ -1.88
CCDC58-204ENST00000479414 C11orf94C9JXX5 98 aa3.32□□□□□ -1.88
CCDC58-204ENST00000479414 ALDOBP05062 364 aa3.32□□□□□ -1.88
CCDC58-204ENST00000479414 IGKV1-13P0DP09 117 aa3.32□□□□□ -1.88
CCDC58-204ENST00000479414 CD1CP29017 333 aa3.32□□□□□ -1.88
CCDC58-204ENST00000479414 NPBWR2P48146 333 aa3.32□□□□□ -1.88
CCDC58-204ENST00000479414 PPOXP50336 477 aa3.32□□□□□ -1.88
CCDC58-204ENST00000479414 OGDHQ02218 1023 aa3.32□□□□□ -1.88
CCDC58-204ENST00000479414 IGFL3Q6UXB1 125 aa3.32□□□□□ -1.88
CCDC58-204ENST00000479414 PSTKQ8IV42 348 aaKnown RBP3.32□□□□□ -1.88
CCDC58-204ENST00000479414 ZADH2Q8N4Q0 377 aa3.32□□□□□ -1.88
CCDC58-204ENST00000479414 FNDC5Q8NAU1 212 aa3.32□□□□□ -1.88
CCDC58-204ENST00000479414 MARCH1Q8TCQ1 289 aa3.32□□□□□ -1.88
CCDC58-204ENST00000479414 PYROXD1Q8WU10 500 aa3.32□□□□□ -1.88
CCDC58-204ENST00000479414 ZNF606Q8WXB4 792 aa3.32□□□□□ -1.88
CCDC58-204ENST00000479414 NT5C3BQ969T7 300 aa3.32□□□□□ -1.88
CCDC58-204ENST00000479414 PLEKHA8Q96JA3 519 aa3.32□□□□□ -1.88
CCDC58-204ENST00000479414 FAM210BQ96KR6 192 aa3.32□□□□□ -1.88
CCDC58-204ENST00000479414 ZBTB18Q99592 522 aa3.32□□□□□ -1.88
CCDC58-204ENST00000479414 DNTTIP1Q9H147 329 aa3.32□□□□□ -1.88
CCDC58-204ENST00000479414 GBA3Q9H227 469 aa3.32□□□□□ -1.88
CCDC58-204ENST00000479414 SLCO1B3Q9NPD5 702 aa3.32□□□□□ -1.88
CCDC58-204ENST00000479414 IL26Q9NPH9 171 aa3.32□□□□□ -1.88
CCDC58-204ENST00000479414 HYPKQ9NX55 129 aa3.32□□□□□ -1.88
CCDC58-204ENST00000479414 EXTL2Q9UBQ6 330 aa3.32□□□□□ -1.88
CCDC58-204ENST00000479414 SLC7A8Q9UHI5 535 aa3.32□□□□□ -1.88
CCDC58-204ENST00000479414 NUFIP1Q9UHK0 495 aaKnown RBP3.32□□□□□ -1.88
CCDC58-204ENST00000479414 GNPTGQ9UJJ9 305 aa3.32□□□□□ -1.88
CCDC58-204ENST00000479414 HEBP2Q9Y5Z4 205 aa3.32□□□□□ -1.88
CCDC58-204ENST00000479414 F11RQ9Y624 299 aaKnown RBP3.32□□□□□ -1.88
CCDC58-204ENST00000479414 ASTN1O14525 1302 aa3.32□□□□□ -1.88
CCDC58-204ENST00000479414 TET2Q6N021 2002 aaPredicted RBP3.32□□□□□ -1.88
CCDC58-204ENST00000479414 NOTCH2Q04721 2471 aa3.31□□□□□ -1.88
CCDC58-204ENST00000479414 ZNFX1Q9P2E3 1918 aaKnown RBP3.31□□□□□ -1.88
CCDC58-204ENST00000479414 OR52A4PA6NMU1 304 aa3.31□□□□□ -1.88
CCDC58-204ENST00000479414 ERVV-1B6SEH8 477 aa3.31□□□□□ -1.88
CCDC58-204ENST00000479414 SUPT3HO75486 399 aa3.31□□□□□ -1.88
CCDC58-204ENST00000479414 CT62P0C5K7 136 aa3.31□□□□□ -1.88
CCDC58-204ENST00000479414 CEBPDP49716 269 aaPredicted RBP3.31□□□□□ -1.88
CCDC58-204ENST00000479414 TPMTP51580 245 aa3.31□□□□□ -1.88
CCDC58-204ENST00000479414 LRRC63Q05C16 580 aa3.31□□□□□ -1.88
CCDC58-204ENST00000479414 BST1Q10588 318 aa3.31□□□□□ -1.88
CCDC58-204ENST00000479414 GUCA2BQ16661 112 aa3.31□□□□□ -1.88
CCDC58-204ENST00000479414 TFDP3Q5H9I0 405 aa3.31□□□□□ -1.88
CCDC58-204ENST00000479414 TRIM40Q6P9F5 258 aa3.31□□□□□ -1.88
CCDC58-204ENST00000479414 CNIH2Q6PI25 160 aa3.31□□□□□ -1.88
CCDC58-204ENST00000479414 KDELC1Q6UW63 502 aa3.31□□□□□ -1.88
CCDC58-204ENST00000479414 C19orf35Q6ZS72 473 aa3.31□□□□□ -1.88
CCDC58-204ENST00000479414 ZNF786Q8N393 782 aa3.31□□□□□ -1.88
CCDC58-204ENST00000479414 OR6X1Q8NH79 312 aa3.31□□□□□ -1.88
CCDC58-204ENST00000479414 DTX3LQ8TDB6 740 aa3.31□□□□□ -1.88
CCDC58-204ENST00000479414 OR8B4Q96RC9 309 aa3.31□□□□□ -1.88
CCDC58-204ENST00000479414 CNN2Q99439 309 aaKnown RBP3.31□□□□□ -1.88
CCDC58-204ENST00000479414 GCOM2Q9BZD3 368 aaPredicted RBP3.31□□□□□ -1.88
CCDC58-204ENST00000479414 PLA2G2FQ9BZM2 168 aa3.31□□□□□ -1.88
CCDC58-204ENST00000479414 NIPAL2Q9H841 368 aa3.31□□□□□ -1.88
CCDC58-204ENST00000479414 DMAP1Q9NPF5 467 aaPredicted RBP3.31□□□□□ -1.88
CCDC58-204ENST00000479414 RBAKQ9NYW8 714 aaPredicted RBP3.31□□□□□ -1.88
CCDC58-204ENST00000479414 OBSCNQ5VST9 7968 aa3.31□□□□□ -1.88
CCDC58-204ENST00000479414 SNAI2O43623 268 aa3.3□□□□□ -1.88
CCDC58-204ENST00000479414 CD5LO43866 347 aa3.3□□□□□ -1.88
CCDC58-204ENST00000479414 SERPINA3P01011 423 aa3.3□□□□□ -1.88
CCDC58-204ENST00000479414 IGLV2-23P01705 113 aa3.3□□□□□ -1.88
CCDC58-204ENST00000479414 CNR1P21554 472 aa3.3□□□□□ -1.88
CCDC58-204ENST00000479414 CMA1P23946 247 aa3.3□□□□□ -1.88
CCDC58-204ENST00000479414 MRPL28Q13084 256 aaKnown RBP3.3□□□□□ -1.88
CCDC58-204ENST00000479414 EBI3Q14213 229 aa3.3□□□□□ -1.88
CCDC58-204ENST00000479414 SGCAQ16586 387 aa3.3□□□□□ -1.88
CCDC58-204ENST00000479414 LRRC31Q6UY01 552 aa3.3□□□□□ -1.88
CCDC58-204ENST00000479414 ASCL5Q7RTU5 278 aa3.3□□□□□ -1.88
CCDC58-204ENST00000479414 H2BFWTQ7Z2G1 175 aa3.3□□□□□ -1.88
CCDC58-204ENST00000479414 PUSL1Q8N0Z8 303 aaKnown RBP3.3□□□□□ -1.88
CCDC58-204ENST00000479414 VN1R2Q8NFZ6 395 aa3.3□□□□□ -1.88
CCDC58-204ENST00000479414 CDC42EP4Q9H3Q1 356 aaKnown RBP3.3□□□□□ -1.88
CCDC58-204ENST00000479414 COL4A4P53420 1690 aaPredicted RBP3.3□□□□□ -1.88
CCDC58-204ENST00000479414 PDS5BQ9NTI5 1447 aa3.29□□□□□ -1.88
CCDC58-204ENST00000479414 TMX2-CTNND1H3BSU7 103 aa3.29□□□□□ -1.88
CCDC58-204ENST00000479414 PES1O00541 588 aaKnown RBP3.29□□□□□ -1.88
CCDC58-204ENST00000479414 SS18L1O75177 396 aaPredicted RBP3.29□□□□□ -1.88
CCDC58-204ENST00000479414 IGHV2-5P01817 119 aa3.29□□□□□ -1.88
CCDC58-204ENST00000479414 GKN3PP0CG01 181 aa3.29□□□□□ -1.88
CCDC58-204ENST00000479414 HNRNPH3P31942 346 aaKnown RBP3.29□□□□□ -1.88
CCDC58-204ENST00000479414 FDFT1P37268 417 aa3.29□□□□□ -1.88
CCDC58-204ENST00000479414 NMUP48645 174 aa3.29□□□□□ -1.88
CCDC58-204ENST00000479414 NCBP2P52298 156 aaKnown RBP eCLIP3.29□□□□□ -1.88
CCDC58-204ENST00000479414 GNMTQ14749 295 aa3.29□□□□□ -1.88
CCDC58-204ENST00000479414 KCTD19Q17RG1 926 aaPredicted RBP3.29□□□□□ -1.88
CCDC58-204ENST00000479414 RFX4Q33E94 735 aa3.29□□□□□ -1.88
CCDC58-204ENST00000479414 C6orf226Q5I0X4 101 aa3.29□□□□□ -1.88
CCDC58-204ENST00000479414 LINC00173Q6ZV60 143 aa3.29□□□□□ -1.88
CCDC58-204ENST00000479414 PLA2G4DQ86XP0 818 aa3.29□□□□□ -1.88
CCDC58-204ENST00000479414 ZNF557Q8N988 423 aaPredicted RBP3.29□□□□□ -1.88
CCDC58-204ENST00000479414 TRPV1Q8NER1 839 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms