RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 HOMER3Q9NSC5 361 aa3.75□□□□□ -1.81
CCDC171-207ENST00000478913 NECAP2Q9NVZ3 263 aa3.75□□□□□ -1.81
CCDC171-207ENST00000478913 SENP1Q9P0U3 644 aa3.75□□□□□ -1.81
CCDC171-207ENST00000478913 RSPH14Q9UHP6 348 aa3.75□□□□□ -1.81
CCDC171-207ENST00000478913 PP2D1A8MPX8 630 aa3.74□□□□□ -1.81
CCDC171-207ENST00000478913 F8VP50 259 aa3.74□□□□□ -1.81
CCDC171-207ENST00000478913 EI24O14681 340 aa3.74□□□□□ -1.81
CCDC171-207ENST00000478913 PALMO75781 387 aa3.74□□□□□ -1.81
CCDC171-207ENST00000478913 TNFP01375 233 aa3.74□□□□□ -1.81
CCDC171-207ENST00000478913 UMPSP11172 480 aa3.74□□□□□ -1.81
CCDC171-207ENST00000478913 NUMBP49757 651 aa3.74□□□□□ -1.81
CCDC171-207ENST00000478913 NME3Q13232 169 aa3.74□□□□□ -1.81
CCDC171-207ENST00000478913 LTB4RQ15722 352 aa3.74□□□□□ -1.81
CCDC171-207ENST00000478913 PPP1R3AQ16821 1122 aa3.74□□□□□ -1.81
CCDC171-207ENST00000478913 TPD52L1Q16890 204 aaPredicted RBP3.74□□□□□ -1.81
CCDC171-207ENST00000478913 SEL1L2Q5TEA6 688 aa3.74□□□□□ -1.81
CCDC171-207ENST00000478913 GPR157Q5UAW9 335 aa3.74□□□□□ -1.81
CCDC171-207ENST00000478913 KRTAP5-2Q701N4 177 aa3.74□□□□□ -1.81
CCDC171-207ENST00000478913 ADAMTSL2Q86TH1 951 aa3.74□□□□□ -1.81
CCDC171-207ENST00000478913 CD177Q8N6Q3 437 aa3.74□□□□□ -1.81
CCDC171-207ENST00000478913 ZNF397Q8NF99 534 aaPredicted RBP3.74□□□□□ -1.81
CCDC171-207ENST00000478913 NEK11Q8NG66 645 aa3.74□□□□□ -1.81
CCDC171-207ENST00000478913 OR10G6Q8NH81 332 aa3.74□□□□□ -1.81
CCDC171-207ENST00000478913 FAM57AQ8TBR7 257 aa3.74□□□□□ -1.81
CCDC171-207ENST00000478913 ESR2Q92731 530 aa3.74□□□□□ -1.81
CCDC171-207ENST00000478913 TMEM45BQ96B21 275 aa3.74□□□□□ -1.81
CCDC171-207ENST00000478913 DOCK10Q96BY6 2186 aa3.74□□□□□ -1.81
CCDC171-207ENST00000478913 FAM173AQ9BQD7 235 aa3.74□□□□□ -1.81
CCDC171-207ENST00000478913 NAT10Q9H0A0 1025 aaKnown RBP3.74□□□□□ -1.81
CCDC171-207ENST00000478913 SLITRK2Q9H156 845 aa3.74□□□□□ -1.81
CCDC171-207ENST00000478913 POLR3FQ9H1D9 316 aaPredicted RBP3.74□□□□□ -1.81
CCDC171-207ENST00000478913 ESM1Q9NQ30 184 aa3.74□□□□□ -1.81
CCDC171-207ENST00000478913 PRR34Q9NV39 138 aa3.74□□□□□ -1.81
CCDC171-207ENST00000478913 C6orf203Q9P0P8 240 aaPredicted RBP3.74□□□□□ -1.81
CCDC171-207ENST00000478913 LHX3Q9UBR4 397 aa3.74□□□□□ -1.81
CCDC171-207ENST00000478913 RPUSD1Q9UJJ7 312 aaKnown RBP3.74□□□□□ -1.81
CCDC171-207ENST00000478913 SMC3Q9UQE7 1217 aa3.74□□□□□ -1.81
CCDC171-207ENST00000478913 STRAPQ9Y3F4 350 aaKnown RBP3.74□□□□□ -1.81
CCDC171-207ENST00000478913 NPIPA5A0A0B4J1W7 369 aa3.73□□□□□ -1.81
CCDC171-207ENST00000478913 SLC9B1P1A6NJY1 282 aa3.73□□□□□ -1.81
CCDC171-207ENST00000478913 CASKO14936 926 aa3.73□□□□□ -1.81
CCDC171-207ENST00000478913 PDE5AO76074 875 aa3.73□□□□□ -1.81
CCDC171-207ENST00000478913 IGKV3-15P01624 115 aa3.73□□□□□ -1.81
CCDC171-207ENST00000478913 FGF1P05230 155 aa3.73□□□□□ -1.81
CCDC171-207ENST00000478913 KLK3P07288 261 aaPredicted RBP3.73□□□□□ -1.81
CCDC171-207ENST00000478913 SAA4P35542 130 aa3.73□□□□□ -1.81
CCDC171-207ENST00000478913 CSKP41240 450 aa3.73□□□□□ -1.81
CCDC171-207ENST00000478913 PPIAP62937 165 aaKnown RBP3.73□□□□□ -1.81
CCDC171-207ENST00000478913 RPS21P63220 83 aaKnown RBP3.73□□□□□ -1.81
CCDC171-207ENST00000478913 NOP14P78316 857 aaKnown RBP3.73□□□□□ -1.81
CCDC171-207ENST00000478913 ELAVL3Q14576 367 aaKnown RBP3.73□□□□□ -1.81
CCDC171-207ENST00000478913 SLC25A35Q3KQZ1 300 aa3.73□□□□□ -1.81
CCDC171-207ENST00000478913 CFAP221Q4G0U5 840 aa3.73□□□□□ -1.81
CCDC171-207ENST00000478913 MARC1Q5VT66 337 aa3.73□□□□□ -1.81
CCDC171-207ENST00000478913 WDR74Q6RFH5 385 aaPredicted RBP3.73□□□□□ -1.81
CCDC171-207ENST00000478913 DPY19L2P2Q6ZN68 376 aa3.73□□□□□ -1.81
CCDC171-207ENST00000478913 YRDCQ86U90 279 aaKnown RBP3.73□□□□□ -1.81
CCDC171-207ENST00000478913 VPS36Q86VN1 386 aa3.73□□□□□ -1.81
CCDC171-207ENST00000478913 FBXL16Q8N461 479 aa3.73□□□□□ -1.81
CCDC171-207ENST00000478913 CCNYQ8ND76 341 aa3.73□□□□□ -1.81
CCDC171-207ENST00000478913 APOOQ9BUR5 198 aa3.73□□□□□ -1.81
CCDC171-207ENST00000478913 SUDS3Q9H7L9 328 aaPredicted RBP3.73□□□□□ -1.81
CCDC171-207ENST00000478913 TIGARQ9NQ88 270 aa3.73□□□□□ -1.81
CCDC171-207ENST00000478913 CENPMQ9NSP4 180 aa3.73□□□□□ -1.81
CCDC171-207ENST00000478913 WRAP73Q9P2S5 460 aaPredicted RBP3.73□□□□□ -1.81
CCDC171-207ENST00000478913 MIOXQ9UGB7 285 aa3.73□□□□□ -1.81
CCDC171-207ENST00000478913 ERVW-1Q9UQF0 538 aa3.73□□□□□ -1.81
CCDC171-207ENST00000478913 KLHDC2Q9Y2U9 406 aa3.73□□□□□ -1.81
CCDC171-207ENST00000478913 V9GYY5 206 aaPredicted RBP3.73□□□□□ -1.81
CCDC171-207ENST00000478913 MPDZO75970 2070 aa3.73□□□□□ -1.81
CCDC171-207ENST00000478913 DNAH7Q8WXX0 4024 aa3.73□□□□□ -1.81
CCDC171-207ENST00000478913 FLG2Q5D862 2391 aaPredicted RBP3.73□□□□□ -1.81
CCDC171-207ENST00000478913 A0A096LNT2 108 aa3.72□□□□□ -1.81
CCDC171-207ENST00000478913 A0A0U1RRA0 63 aa3.72□□□□□ -1.81
CCDC171-207ENST00000478913 K7EIL1 84 aa3.72□□□□□ -1.81
CCDC171-207ENST00000478913 SAP18O00422 153 aaKnown RBP3.72□□□□□ -1.81
CCDC171-207ENST00000478913 BUB1O43683 1085 aa3.72□□□□□ -1.81
CCDC171-207ENST00000478913 ZBTB14O43829 449 aa3.72□□□□□ -1.81
CCDC171-207ENST00000478913 BCAS2O75934 225 aaPredicted RBP3.72□□□□□ -1.81
CCDC171-207ENST00000478913 TGFAP01135 160 aa3.72□□□□□ -1.81
CCDC171-207ENST00000478913 DPP4P27487 766 aa3.72□□□□□ -1.81
CCDC171-207ENST00000478913 YWHABP31946 246 aaKnown RBP3.72□□□□□ -1.81
CCDC171-207ENST00000478913 FNTAP49354 379 aa3.72□□□□□ -1.81
CCDC171-207ENST00000478913 SGSHP51688 502 aa3.72□□□□□ -1.81
CCDC171-207ENST00000478913 BNIP1Q12981 228 aa3.72□□□□□ -1.81
CCDC171-207ENST00000478913 SLC10A1Q14973 349 aa3.72□□□□□ -1.81
CCDC171-207ENST00000478913 CD226Q15762 336 aa3.72□□□□□ -1.81
CCDC171-207ENST00000478913 MICAQ29983 383 aa3.72□□□□□ -1.81
CCDC171-207ENST00000478913 ATRAIDQ6UW56 229 aa3.72□□□□□ -1.81
CCDC171-207ENST00000478913 RANBP3LQ86VV4 465 aaPredicted RBP3.72□□□□□ -1.81
CCDC171-207ENST00000478913 ZBED8Q8IZ13 594 aa3.72□□□□□ -1.81
CCDC171-207ENST00000478913 SNX31Q8N9S9 440 aa3.72□□□□□ -1.81
CCDC171-207ENST00000478913 KLHL30-AS1Q8NEE0 82 aa3.72□□□□□ -1.81
CCDC171-207ENST00000478913 ANKRD20A12PQ8NF67 263 aa3.72□□□□□ -1.81
CCDC171-207ENST00000478913 WFDC5Q8TCV5 224 aa3.72□□□□□ -1.81
CCDC171-207ENST00000478913 VN1R17PQ8TDU5 208 aa3.72□□□□□ -1.81
CCDC171-207ENST00000478913 OR8D1Q8WZ84 308 aa3.72□□□□□ -1.81
CCDC171-207ENST00000478913 ANKRD7Q92527 254 aa3.72□□□□□ -1.81
CCDC171-207ENST00000478913 RNASE6Q93091 150 aaKnown RBP3.72□□□□□ -1.81
CCDC171-207ENST00000478913 LHX4Q969G2 390 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms