RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 ZSCAN12O43309 604 aa-0.58□□□□□ -2.5
CALD1-218ENST00000478075 TPD52L2O43399 206 aaKnown RBP-0.58□□□□□ -2.5
CALD1-218ENST00000478075 VEGFDO43915 354 aa-0.58□□□□□ -2.5
CALD1-218ENST00000478075 GLSO94925 669 aaPredicted RBP-0.58□□□□□ -2.5
CALD1-218ENST00000478075 ALDOBP05062 364 aa-0.58□□□□□ -2.5
CALD1-218ENST00000478075 GNSP15586 552 aa-0.58□□□□□ -2.5
CALD1-218ENST00000478075 CYP2B6P20813 491 aa-0.58□□□□□ -2.5
CALD1-218ENST00000478075 CALB2P22676 271 aa-0.58□□□□□ -2.5
CALD1-218ENST00000478075 IDH2P48735 452 aaKnown RBP-0.58□□□□□ -2.5
CALD1-218ENST00000478075 PITPNBP48739 271 aa-0.58□□□□□ -2.5
CALD1-218ENST00000478075 SMSP52788 366 aa-0.58□□□□□ -2.5
CALD1-218ENST00000478075 SSTP61278 116 aa-0.58□□□□□ -2.5
CALD1-218ENST00000478075 ASIC1P78348 528 aa-0.58□□□□□ -2.5
CALD1-218ENST00000478075 EMX1Q04741 257 aaPredicted RBP-0.58□□□□□ -2.5
CALD1-218ENST00000478075 EXOSC2Q13868 293 aaKnown RBP-0.58□□□□□ -2.5
CALD1-218ENST00000478075 DEFB115Q30KQ5 88 aa-0.58□□□□□ -2.5
CALD1-218ENST00000478075 PARP15Q460N3 678 aa-0.58□□□□□ -2.5
CALD1-218ENST00000478075 CCDC158Q5M9N0 1113 aa-0.58□□□□□ -2.5
CALD1-218ENST00000478075 MFSD4BQ5TF39 518 aa-0.58□□□□□ -2.5
CALD1-218ENST00000478075 CAVIN1Q6NZI2 390 aaKnown RBP-0.58□□□□□ -2.5
CALD1-218ENST00000478075 LANCL3Q6ZV70 420 aa-0.58□□□□□ -2.5
CALD1-218ENST00000478075 APTXQ7Z2E3 356 aaKnown RBP-0.58□□□□□ -2.5
CALD1-218ENST00000478075 C16orf62Q7Z3J2 963 aa-0.58□□□□□ -2.5
CALD1-218ENST00000478075 SBSPONQ8IVN8 264 aa-0.58□□□□□ -2.5
CALD1-218ENST00000478075 STPG2Q8N412 459 aa-0.58□□□□□ -2.5
CALD1-218ENST00000478075 SLC35G3Q8N808 338 aa-0.58□□□□□ -2.5
CALD1-218ENST00000478075 STKLD1Q8NE28 680 aa-0.58□□□□□ -2.5
CALD1-218ENST00000478075 NOXO1Q8NFA2 376 aa-0.58□□□□□ -2.5
CALD1-218ENST00000478075 ACOT11Q8WXI4 607 aaPredicted RBP-0.58□□□□□ -2.5
CALD1-218ENST00000478075 FGF14Q92915 247 aa-0.58□□□□□ -2.5
CALD1-218ENST00000478075 FLYWCH2Q96CP2 140 aaKnown RBP-0.58□□□□□ -2.5
CALD1-218ENST00000478075 PAGE5Q96GU1 130 aa-0.58□□□□□ -2.5
CALD1-218ENST00000478075 ZNF625Q96I27 306 aaPredicted RBP-0.58□□□□□ -2.5
CALD1-218ENST00000478075 FAM213AQ9BRX8 229 aa-0.58□□□□□ -2.5
CALD1-218ENST00000478075 C1orf50Q9BV19 199 aa-0.58□□□□□ -2.5
CALD1-218ENST00000478075 UTP14AQ9BVJ6 771 aaKnown RBP-0.58□□□□□ -2.5
CALD1-218ENST00000478075 OSBPL8Q9BZF1 889 aa-0.58□□□□□ -2.5
CALD1-218ENST00000478075 EDA2RQ9HAV5 297 aa-0.58□□□□□ -2.5
CALD1-218ENST00000478075 NUDT15Q9NV35 164 aa-0.58□□□□□ -2.5
CALD1-218ENST00000478075 MRPL39Q9NYK5 338 aaKnown RBP-0.58□□□□□ -2.5
CALD1-218ENST00000478075 BCAP29Q9UHQ4 241 aa-0.58□□□□□ -2.5
CALD1-218ENST00000478075 OR51B4Q9Y5P0 310 aa-0.58□□□□□ -2.5
CALD1-218ENST00000478075 CACNA1AO00555 2505 aa-0.58□□□□□ -2.5
CALD1-218ENST00000478075 DOPEY1Q5JWR5 2465 aa-0.58□□□□□ -2.5
CALD1-218ENST00000478075 OTOGQ6ZRI0 2925 aa-0.58□□□□□ -2.5
CALD1-218ENST00000478075 A0A087WZY1 265 aa-0.59□□□□□ -2.5
CALD1-218ENST00000478075 IGHV2-70DA0A0C4DH43 119 aa-0.59□□□□□ -2.5
CALD1-218ENST00000478075 VPS37CA5D8V6 355 aaPredicted RBP-0.59□□□□□ -2.5
CALD1-218ENST00000478075 ANKRD30BLA7E2S9 258 aa-0.59□□□□□ -2.5
CALD1-218ENST00000478075 AQP9O43315 295 aa-0.59□□□□□ -2.5
CALD1-218ENST00000478075 HLA-DQB1P01920 261 aa-0.59□□□□□ -2.5
CALD1-218ENST00000478075 UROSP10746 265 aa-0.59□□□□□ -2.5
CALD1-218ENST00000478075 ANXA3P12429 323 aa-0.59□□□□□ -2.5
CALD1-218ENST00000478075 ZNF18P17022 549 aa-0.59□□□□□ -2.5
CALD1-218ENST00000478075 PTPN6P29350 595 aa-0.59□□□□□ -2.5
CALD1-218ENST00000478075 LEPP41159 167 aa-0.59□□□□□ -2.5
CALD1-218ENST00000478075 BIKQ13323 160 aa-0.59□□□□□ -2.5
CALD1-218ENST00000478075 CUL1Q13616 776 aa-0.59□□□□□ -2.5
CALD1-218ENST00000478075 MAD2L1BPQ15013 274 aaPredicted RBP-0.59□□□□□ -2.5
CALD1-218ENST00000478075 POU2AF1Q16633 256 aa-0.59□□□□□ -2.5
CALD1-218ENST00000478075 FUT11Q495W5 492 aa-0.59□□□□□ -2.5
CALD1-218ENST00000478075 MPP7Q5T2T1 576 aa-0.59□□□□□ -2.5
CALD1-218ENST00000478075 ATL3Q6DD88 541 aa-0.59□□□□□ -2.5
CALD1-218ENST00000478075 OR2A2Q6IF42 318 aa-0.59□□□□□ -2.5
CALD1-218ENST00000478075 PET117Q6UWS5 81 aa-0.59□□□□□ -2.5
CALD1-218ENST00000478075 SGPP2Q8IWX5 399 aa-0.59□□□□□ -2.5
CALD1-218ENST00000478075 UNC45BQ8IWX7 931 aa-0.59□□□□□ -2.5
CALD1-218ENST00000478075 ZNF557Q8N988 423 aaPredicted RBP-0.59□□□□□ -2.5
CALD1-218ENST00000478075 ZNF563Q8TA94 476 aa-0.59□□□□□ -2.5
CALD1-218ENST00000478075 RNASE11Q8TAA1 199 aaKnown RBP-0.59□□□□□ -2.5
CALD1-218ENST00000478075 CNIH3Q8TBE1 160 aa-0.59□□□□□ -2.5
CALD1-218ENST00000478075 CACNG8Q8WXS5 425 aa-0.59□□□□□ -2.5
CALD1-218ENST00000478075 WDR34Q96EX3 536 aa-0.59□□□□□ -2.5
CALD1-218ENST00000478075 NACA2Q9H009 215 aa-0.59□□□□□ -2.5
CALD1-218ENST00000478075 C1orf198Q9H425 327 aa-0.59□□□□□ -2.5
CALD1-218ENST00000478075 RPAP3Q9H6T3 665 aaPredicted RBP-0.59□□□□□ -2.5
CALD1-218ENST00000478075 CACNA1CQ13936 2221 aa-0.59□□□□□ -2.5
CALD1-218ENST00000478075 TPRP12270 2363 aaKnown RBP-0.59□□□□□ -2.5
CALD1-218ENST00000478075 ZFYVE26Q68DK2 2539 aa-0.59□□□□□ -2.5
CALD1-218ENST00000478075 FAT1Q14517 4588 aa-0.59□□□□□ -2.5
CALD1-218ENST00000478075 PDZD2O15018 2839 aa-0.6□□□□□ -2.5
CALD1-218ENST00000478075 VWA8A3KMH1 1905 aa-0.6□□□□□ -2.5
CALD1-218ENST00000478075 TSPOAP1O95153 1857 aa-0.6□□□□□ -2.51
CALD1-218ENST00000478075 ZNF106Q9H2Y7 1883 aaKnown RBP-0.6□□□□□ -2.51
CALD1-218ENST00000478075 STARD9Q9P2P6 4700 aa-0.6□□□□□ -2.51
CALD1-218ENST00000478075 FAM74A7A6NL05 159 aa-0.6□□□□□ -2.51
CALD1-218ENST00000478075 P4HA2O15460 535 aa-0.6□□□□□ -2.51
CALD1-218ENST00000478075 NUPL2O15504 423 aaKnown RBP-0.6□□□□□ -2.51
CALD1-218ENST00000478075 HLA-DPB1P04440 258 aa-0.6□□□□□ -2.51
CALD1-218ENST00000478075 NCBP2P52298 156 aaKnown RBP eCLIP-0.6□□□□□ -2.51
CALD1-218ENST00000478075 EMP2P54851 167 aa-0.6□□□□□ -2.51
CALD1-218ENST00000478075 PRMT2P55345 433 aa-0.6□□□□□ -2.51
CALD1-218ENST00000478075 SNU13P55769 128 aaKnown RBP-0.6□□□□□ -2.51
CALD1-218ENST00000478075 SRP54P61011 504 aaKnown RBP-0.6□□□□□ -2.51
CALD1-218ENST00000478075 TGM3Q08188 693 aa-0.6□□□□□ -2.51
CALD1-218ENST00000478075 TFCP2Q12800 502 aa-0.6□□□□□ -2.51
CALD1-218ENST00000478075 PRDX4Q13162 271 aa-0.6□□□□□ -2.51
CALD1-218ENST00000478075 FAM74A3Q4VXF1 159 aa-0.6□□□□□ -2.51
CALD1-218ENST00000478075 AMMECR1LQ6DCA0 310 aa-0.6□□□□□ -2.51
CALD1-218ENST00000478075 RAET1GQ6H3X3 334 aa-0.6□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms