RNA–Protein interactions for RNA: ENST00000478063.2

LMNA-214, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 285 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-214ENST00000478063 CRMP1Q14194 572 aa11.9□□□□□ -0.5
LMNA-214ENST00000478063 EMC4Q5J8M3 183 aa11.9□□□□□ -0.5
LMNA-214ENST00000478063 UGT2A3Q6UWM9 527 aa11.9□□□□□ -0.5
LMNA-214ENST00000478063 SLC35D2Q76EJ3 337 aa11.9□□□□□ -0.5
LMNA-214ENST00000478063 FCRLAQ7L513 359 aa11.9□□□□□ -0.5
LMNA-214ENST00000478063 CXXC5Q7LFL8 322 aaKnown RBP11.9□□□□□ -0.5
LMNA-214ENST00000478063 PKD1L2Q7Z442 2459 aa11.9□□□□□ -0.5
LMNA-214ENST00000478063 JAZF1Q86VZ6 243 aa11.9□□□□□ -0.5
LMNA-214ENST00000478063 GHDCQ8N2G8 530 aa11.9□□□□□ -0.5
LMNA-214ENST00000478063 SLC37A3Q8NCC5 494 aa11.9□□□□□ -0.5
LMNA-214ENST00000478063 SDR9C7Q8NEX9 313 aa11.9□□□□□ -0.5
LMNA-214ENST00000478063 FBLIM1Q8WUP2 373 aa11.9□□□□□ -0.5
LMNA-214ENST00000478063 APH1BQ8WW43 257 aa11.9□□□□□ -0.5
LMNA-214ENST00000478063 PRRG4Q9BZD6 226 aa11.9□□□□□ -0.5
LMNA-214ENST00000478063 FANCFQ9NPI8 374 aa11.9□□□□□ -0.5
LMNA-214ENST00000478063 CLN6Q9NWW5 311 aa11.9□□□□□ -0.5
LMNA-214ENST00000478063 B3GAT1Q9P2W7 334 aa11.9□□□□□ -0.5
LMNA-214ENST00000478063 MCTS1Q9ULC4 181 aaKnown RBP11.9□□□□□ -0.5
LMNA-214ENST00000478063 FAM183AA6NL82 134 aa11.89□□□□□ -0.51
LMNA-214ENST00000478063 PRR23D1E9PI22 279 aaPredicted RBP11.89□□□□□ -0.51
LMNA-214ENST00000478063 ERVH48-1M5A8F1 160 aa11.89□□□□□ -0.51
LMNA-214ENST00000478063 XKRYO14609 159 aa11.89□□□□□ -0.51
LMNA-214ENST00000478063 TRAF3IP2O43734 574 aaPredicted RBP11.89□□□□□ -0.51
LMNA-214ENST00000478063 WBP4O75554 376 aaKnown RBP11.89□□□□□ -0.51
LMNA-214ENST00000478063 SMNDC1O75940 238 aaKnown RBP eCLIP11.89□□□□□ -0.51
LMNA-214ENST00000478063 BCL10O95999 233 aa11.89□□□□□ -0.51
LMNA-214ENST00000478063 RPSAP08865 295 aaKnown RBP11.89□□□□□ -0.51
LMNA-214ENST00000478063 PRR23D2P0DMB1 279 aaPredicted RBP11.89□□□□□ -0.51
LMNA-214ENST00000478063 ACVR2AP27037 513 aa11.89□□□□□ -0.51
LMNA-214ENST00000478063 CHN2P52757 468 aa11.89□□□□□ -0.51
LMNA-214ENST00000478063 BIDP55957 195 aa11.89□□□□□ -0.51
LMNA-214ENST00000478063 LY6DQ14210 128 aa11.89□□□□□ -0.51
LMNA-214ENST00000478063 PON3Q15166 354 aa11.89□□□□□ -0.51
LMNA-214ENST00000478063 SMN1Q16637 294 aaKnown RBP11.89□□□□□ -0.51
LMNA-214ENST00000478063 PRR30Q53SZ7 412 aaPredicted RBP11.89□□□□□ -0.51
LMNA-214ENST00000478063 MESTQ5EB52 335 aa11.89□□□□□ -0.51
LMNA-214ENST00000478063 C6orf141Q5SZD1 244 aa11.89□□□□□ -0.51
LMNA-214ENST00000478063 EEF1A1P5Q5VTE0 462 aa11.89□□□□□ -0.51
LMNA-214ENST00000478063 ABLIM2Q6H8Q1 611 aa11.89□□□□□ -0.51
LMNA-214ENST00000478063 PLBD1Q6P4A8 553 aa11.89□□□□□ -0.51
LMNA-214ENST00000478063 LEG1Q6P5S2 330 aa11.89□□□□□ -0.51
LMNA-214ENST00000478063 CPOQ8IVL8 374 aa11.89□□□□□ -0.51
LMNA-214ENST00000478063 PM20D2Q8IYS1 436 aa11.89□□□□□ -0.51
LMNA-214ENST00000478063 ARIH2OSQ8N7S6 290 aa11.89□□□□□ -0.51
LMNA-214ENST00000478063 CYB561A3Q8NBI2 242 aa11.89□□□□□ -0.51
LMNA-214ENST00000478063 ZNF519Q8TB69 540 aa11.89□□□□□ -0.51
LMNA-214ENST00000478063 FAR1Q8WVX9 515 aa11.89□□□□□ -0.51
LMNA-214ENST00000478063 ASB10Q8WXI3 467 aa11.89□□□□□ -0.51
LMNA-214ENST00000478063 LRR1Q96L50 414 aa11.89□□□□□ -0.51
LMNA-214ENST00000478063 Q96MT0 163 aa11.89□□□□□ -0.51
LMNA-214ENST00000478063 CNTNAP3BQ96NU0 1288 aa11.89□□□□□ -0.51
LMNA-214ENST00000478063 NR1H4Q96RI1 486 aaPredicted RBP11.89□□□□□ -0.51
LMNA-214ENST00000478063 TUBA1CQ9BQE3 449 aa11.89□□□□□ -0.51
LMNA-214ENST00000478063 CNTNAP3Q9BZ76 1288 aa11.89□□□□□ -0.51
LMNA-214ENST00000478063 PRDM14Q9GZV8 571 aa11.89□□□□□ -0.51
LMNA-214ENST00000478063 FN3KQ9H479 309 aa11.89□□□□□ -0.51
LMNA-214ENST00000478063 MED20Q9H944 212 aa11.89□□□□□ -0.51
LMNA-214ENST00000478063 HINT3Q9NQE9 182 aaKnown RBP11.89□□□□□ -0.51
LMNA-214ENST00000478063 MED29Q9NX70 200 aa11.89□□□□□ -0.51
LMNA-214ENST00000478063 PHF3Q92576 2039 aaKnown RBP11.89□□□□□ -0.51
LMNA-214ENST00000478063 TLN1Q9Y490 2541 aaKnown RBP11.89□□□□□ -0.51
LMNA-214ENST00000478063 FREM1Q5H8C1 2179 aa11.88□□□□□ -0.51
LMNA-214ENST00000478063 PRRC2CQ9Y520 2896 aaKnown RBP11.88□□□□□ -0.51
LMNA-214ENST00000478063 LOC102725191A0A1B0GVB3 256 aa11.88□□□□□ -0.51
LMNA-214ENST00000478063 OR14I1A6ND48 311 aa11.88□□□□□ -0.51
LMNA-214ENST00000478063 A6NIZ1 184 aa11.88□□□□□ -0.51
LMNA-214ENST00000478063 NPIPB13A6NJU9 1138 aa11.88□□□□□ -0.51
LMNA-214ENST00000478063 CLCA1A8K7I4 914 aa11.88□□□□□ -0.51
LMNA-214ENST00000478063 NPIPB4C9JG80 1138 aa11.88□□□□□ -0.51
LMNA-214ENST00000478063 H7C1C5 153 aa11.88□□□□□ -0.51
LMNA-214ENST00000478063 SLC1A7O00341 560 aa11.88□□□□□ -0.51
LMNA-214ENST00000478063 ARHGEF9O43307 516 aa11.88□□□□□ -0.51
LMNA-214ENST00000478063 CYTIPO60759 359 aa11.88□□□□□ -0.51
LMNA-214ENST00000478063 FAM20BO75063 409 aa11.88□□□□□ -0.51
LMNA-214ENST00000478063 ENTPD6O75354 484 aa11.88□□□□□ -0.51
LMNA-214ENST00000478063 RENP00797 406 aa11.88□□□□□ -0.51
LMNA-214ENST00000478063 NUDT6P53370 316 aa11.88□□□□□ -0.51
LMNA-214ENST00000478063 RAP1BP61224 184 aa11.88□□□□□ -0.51
LMNA-214ENST00000478063 LCN6P62502 163 aa11.88□□□□□ -0.51
LMNA-214ENST00000478063 RAP1AP62834 184 aa11.88□□□□□ -0.51
LMNA-214ENST00000478063 EFNB1P98172 346 aa11.88□□□□□ -0.51
LMNA-214ENST00000478063 TEKQ02763 1124 aa11.88□□□□□ -0.51
LMNA-214ENST00000478063 RASGEF1BQ0VAM2 473 aa11.88□□□□□ -0.51
LMNA-214ENST00000478063 ITGADQ13349 1161 aa11.88□□□□□ -0.51
LMNA-214ENST00000478063 SLC17A1Q14916 467 aa11.88□□□□□ -0.51
LMNA-214ENST00000478063 POU4F3Q15319 338 aa11.88□□□□□ -0.51
LMNA-214ENST00000478063 OCLNQ16625 522 aa11.88□□□□□ -0.51
LMNA-214ENST00000478063 ST3GAL2Q16842 350 aa11.88□□□□□ -0.51
LMNA-214ENST00000478063 KRTCAP3Q53RY4 240 aa11.88□□□□□ -0.51
LMNA-214ENST00000478063 TMEM201Q5SNT2 666 aa11.88□□□□□ -0.51
LMNA-214ENST00000478063 ZNF362Q5T0B9 420 aaPredicted RBP11.88□□□□□ -0.51
LMNA-214ENST00000478063 ARMC4Q5T2S8 1044 aa11.88□□□□□ -0.51
LMNA-214ENST00000478063 MEDAGQ5VYS4 303 aa11.88□□□□□ -0.51
LMNA-214ENST00000478063 FAM205BPQ63HN1 556 aa11.88□□□□□ -0.51
LMNA-214ENST00000478063 ZNF324BQ6AW86 544 aaPredicted RBP11.88□□□□□ -0.51
LMNA-214ENST00000478063 LAIR2Q6ISS4 152 aa11.88□□□□□ -0.51
LMNA-214ENST00000478063 PLXDC2Q6UX71 529 aa11.88□□□□□ -0.51
LMNA-214ENST00000478063 BCDIN3DQ7Z5W3 292 aaKnown RBP11.88□□□□□ -0.51
LMNA-214ENST00000478063 ADCK1Q86TW2 530 aa11.88□□□□□ -0.51
LMNA-214ENST00000478063 FAM26EQ8N5C1 309 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms