RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 TCTE3Q8IZS6 198 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 SYS1Q8N2H4 156 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 SLC44A3Q8N4M1 653 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 ZNF614Q8N883 585 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 POMGNT2Q8NAT1 580 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 OR6C4Q8NGE1 309 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 OR5T3Q8NGG3 340 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 OR2T27Q8NH04 317 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 RPLP0P6Q8NHW5 317 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 GRHL3Q8TE85 626 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 PATE1Q8WXA2 126 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 SMPDL3BQ92485 455 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 PHYHIPQ92561 330 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 PTP4A1Q93096 173 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 RFT1Q96AA3 541 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 SGTBQ96EQ0 304 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 MSANTD3Q96H12 275 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 SENP5Q96HI0 755 aaPredicted RBP4.51□□□□□ -1.69
SF3B6-202ENST00000478050 PTCHD1Q96NR3 888 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 NECTIN4Q96NY8 510 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 DGAT2Q96PD7 388 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 TNFRSF13CQ96RJ3 184 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 DCLRE1CQ96SD1 692 aaKnown RBP4.51□□□□□ -1.69
SF3B6-202ENST00000478050 CNN2Q99439 309 aaKnown RBP4.51□□□□□ -1.69
SF3B6-202ENST00000478050 TBX5Q99593 518 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 TIMP4Q99727 224 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 MARVELD1Q9BSK0 173 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 TRAF4Q9BUZ4 470 aaPredicted RBP4.51□□□□□ -1.69
SF3B6-202ENST00000478050 HCAR1Q9BXC0 346 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 ENKD1Q9H0I2 346 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 OR51V1Q9H2C8 321 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 SLA2Q9H6Q3 261 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 ERVMER34-1Q9H9K5 563 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 TMEM165Q9HC07 324 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 MCCC2Q9HCC0 563 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 Q9N2J8 555 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 CD93Q9NPY3 652 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 MEPEQ9NQ76 525 aaPredicted RBP4.51□□□□□ -1.69
SF3B6-202ENST00000478050 RPRD1BQ9NQG5 326 aaKnown RBP4.51□□□□□ -1.69
SF3B6-202ENST00000478050 PRTFDC1Q9NRG1 225 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 CYSLTR2Q9NS75 346 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 FLRT3Q9NZU0 649 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 ABRACLQ9P1F3 81 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 USP36Q9P275 1121 aaKnown RBP4.51□□□□□ -1.69
SF3B6-202ENST00000478050 MALT1Q9UDY8 824 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 CHRNA9Q9UGM1 479 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 MMP17Q9ULZ9 603 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 ICAM5Q9UMF0 924 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 RBMX2Q9Y388 322 aaKnown RBP4.51□□□□□ -1.69
SF3B6-202ENST00000478050 ALG5Q9Y673 324 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 PIAS3Q9Y6X2 628 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 ACACAQ13085 2346 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 SMG1Q96Q15 3661 aaKnown RBP4.51□□□□□ -1.69
SF3B6-202ENST00000478050 A0A087WUJ7 227 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 A0A0G2JK05 382 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 SPTY2D1-AS1A0A0U1RR47 76 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 SERINC4A6NH21 518 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 A8MU76 341 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 CENPBD1B2RD01 187 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 J3QLW9 94 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 CLDN4O14493 209 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 ARPC3O15145 178 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 ARHGEF9O43307 516 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 GPRIN2O60269 458 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 SC5DO75845 299 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 GATBO75879 557 aaKnown RBP4.5□□□□□ -1.69
SF3B6-202ENST00000478050 ARL6IP5O75915 188 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 OR7A10O76100 309 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 NSA2O95478 260 aaKnown RBP4.5□□□□□ -1.69
SF3B6-202ENST00000478050 CSTAP01040 98 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 IGF2P01344 180 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 IGKV1D-16P01601 117 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 PLA2G1BP04054 148 aaKnown RBP4.5□□□□□ -1.69
SF3B6-202ENST00000478050 CSF2P04141 144 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 IGHV4-34P06331 123 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 MRPL3P09001 348 aaKnown RBP4.5□□□□□ -1.69
SF3B6-202ENST00000478050 THEGLP0DJG4 465 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 PSKH1P11801 424 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 GLULP15104 373 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 ST6GAL1P15907 406 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 ZNF19P17023 458 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 ELK1P19419 428 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 FUT1P19526 365 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 RAB3BP20337 219 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 S1PR1P21453 382 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 ERP29P30040 261 aaKnown RBP4.5□□□□□ -1.69
SF3B6-202ENST00000478050 THBS2P35442 1172 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 PITPNBP48739 271 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 SCAND1P57086 179 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 RPL11P62913 178 aaKnown RBP4.5□□□□□ -1.69
SF3B6-202ENST00000478050 PITPNAQ00169 270 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 PSG6Q00889 435 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 HHEXQ03014 270 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 CSTF1Q05048 431 aaKnown RBP4.5□□□□□ -1.69
SF3B6-202ENST00000478050 SLC3A1Q07837 685 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 CRYZQ08257 329 aaKnown RBP4.5□□□□□ -1.69
SF3B6-202ENST00000478050 IL10RAQ13651 578 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 FAM53BQ14153 422 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 INSL4Q14641 139 aa4.5□□□□□ -1.69
SF3B6-202ENST00000478050 CDK5R1Q15078 307 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms