RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 SRSF3P84103 164 aaKnown RBP11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 PLEKHN1Q494U1 663 aaPredicted RBP11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 ARSJQ5FYB0 599 aaPredicted RBP11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 TCEAL5Q5H9L2 206 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 C5orf24Q7Z6I8 188 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 CD163Q86VB7 1156 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 ETFBKMTQ8IXQ9 262 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 HIST3H2BBQ8N257 126 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 EID2Q8N6I1 236 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 SEMA6DQ8NFY4 1073 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 OR10AD1Q8NGE0 317 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 OR8J1Q8NGP2 316 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 NPRL2Q8WTW4 380 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 RNF141Q8WVD5 230 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 SMIM4Q8WVI0 70 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 OIT3Q8WWZ8 545 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 RSPRY1Q96DX4 576 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 MVB12AQ96EY5 273 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 ZNF382Q96SR6 550 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 ZNF426Q9BUY5 554 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 OR10A4Q9H209 315 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 CLMPQ9H6B4 373 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 PLEKHA1Q9HB21 404 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 TRPV4Q9HBA0 871 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 TMEM27Q9HBJ8 222 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 NOX3Q9HBY0 568 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 FLVCR2Q9UPI3 526 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 A0A1W2PPH5 198 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 HEPACAM2A8MVW5 462 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 TMEM238C9JI98 176 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 K7EP13 123 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 FMO6PO60774 539 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 ADAP00813 363 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 ANXA5P08758 320 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 SFTA3P0C7M3 94 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 EPHA1P21709 976 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 CDH11P55287 796 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 JOSD1Q15040 202 aaPredicted RBP11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 SLC5A12Q1EHB4 618 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 LRRC73Q5JTD7 316 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 PAQR6Q6TCH4 344 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 DRAM2Q6UX65 266 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 LINGO2Q7L985 606 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 ZNF573Q86YE8 665 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 MMP21Q8N119 569 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 BPIFB2Q8N4F0 458 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 VN1R2Q8NFZ6 395 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 OR52N4Q8NGI2 321 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 OR13C8Q8NGS7 320 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 LKAAEAR1Q8TD35 194 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 RNASE8Q8TDE3 154 aaKnown RBP11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 CORO2AQ92828 525 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 RNFT2Q96EX2 444 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 NECAB3Q96P71 396 aaPredicted RBP11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 OR52E6Q96RD3 313 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 DPY30Q9C005 99 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 LMAN1LQ9HAT1 526 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 RDH14Q9HBH5 336 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 UBQLN4Q9NRR5 601 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 RLIMQ9NVW2 624 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 IL17BQ9UHF5 180 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 POMT1Q9Y6A1 747 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 DSPPQ9NZW4 1301 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 TRANK1O15050 2925 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 A0A1B0GTL3 188 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 EDDM13A0A1B0GTR0 161 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 ZNF724A8MTY0 619 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 IDSB3KWA1 339 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 SULT2B1O00204 365 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 SUV39H1O43463 412 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 C8GP07360 202 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 SLC35G4P0C7Q5 338 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 TBC1D3HP0C7X1 549 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 ATP1B2P14415 290 aaPredicted RBP11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 GABRR1P24046 479 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 IL2RGP31785 369 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 FEN1P39748 380 aaKnown RBP11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 CAV2P51636 162 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 NDUFA6P56556 154 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 DGCR2P98153 550 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 RAB30Q15771 203 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 KHDC3LQ587J8 217 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 SLC25A30Q5SVS4 291 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 C10orf111Q8N326 155 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 ZNF664Q8N3J9 261 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 OR4F15Q8NGB8 312 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 OR52I1Q8NGK6 324 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 OR8D1Q8WZ84 308 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 PHYHIPQ92561 330 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 WDR89Q96FK6 387 aaPredicted RBP11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 SLC6A18Q96N87 628 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 ZNF471Q9BX82 626 aaPredicted RBP11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 ACTR3CQ9C0K3 210 aaPredicted RBP11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 SYT4Q9H2B2 425 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 TMEM185BQ9H7F4 350 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 NMNAT1Q9HAN9 279 aaPredicted RBP11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 TESQ9UGI8 421 aaKnown RBP11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 CACFD1Q9UGQ2 172 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms