RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 ZBTB34Q8NCN2 500 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 NUDT10Q8NFP7 164 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 MAGEE2Q8TD90 523 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-214ENST00000477152 RAB8BQ92930 207 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 NUDT11Q96G61 164 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 ANKRD27Q96NW4 1050 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 SLC38A2Q96QD8 506 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 KLHDC3Q9BQ90 382 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 C1QTNF6Q9BXI9 259 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 RAD21L1Q9H4I0 556 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 RMND5AQ9H871 391 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 MANSC1Q9H8J5 431 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 P2RX2Q9UBL9 471 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 GIMAP2Q9UG22 337 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 SCOCQ9UIL1 159 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 OSGIN1Q9UJX0 560 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 IFT52Q9Y366 437 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 TLN2Q9Y4G6 2542 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 A0A1W2PR80 420 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 AGAP5A6NIR3 686 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 TRPC5OSA6NMA1 111 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 SLCO1B7G3V0H7 640 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 RGS16O15492 202 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-214ENST00000477152 GPRIN2O60269 458 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 TMEM127O75204 238 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 AHSA1O95433 338 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 ITGA5P08648 1049 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 NR4A2P43354 598 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 PPOXP50336 477 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 CRISP3P54108 245 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 CASP8Q14790 479 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 OR7A5Q15622 319 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 CHI3L2Q15782 390 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 PRR31Q5SQ13 230 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 ANKRD16Q6P6B7 361 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 ZNF621Q6ZSS3 439 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 WDR31Q8NA23 367 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 OR9K2Q8NGE7 335 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 OR52E4Q8NGH9 312 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 AURKBQ96GD4 344 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-214ENST00000477152 CCDC115Q96NT0 180 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 OR52E6Q96RD3 313 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 LINC00470Q9BZP3 86 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 OR11A1Q9GZK7 315 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 SLC7A10Q9NS82 523 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 SELENONQ9NZV5 590 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 RPS6KB2Q9UBS0 482 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 KCNE5Q9UJ90 142 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 YLPM1P49750 1951 aaKnown RBP6.33□□□□□ -1.4
BRCA1-214ENST00000477152 ARPC4-TTLL3A0A0A6YYG9 625 aa6.32□□□□□ -1.4
BRCA1-214ENST00000477152 TMEM72A0PK05 275 aa6.32□□□□□ -1.4
BRCA1-214ENST00000477152 AQP7P3A6NL99 342 aa6.32□□□□□ -1.4
BRCA1-214ENST00000477152 PDLIM1O00151 329 aa6.32□□□□□ -1.4
BRCA1-214ENST00000477152 OR2T1O43869 369 aa6.32□□□□□ -1.4
BRCA1-214ENST00000477152 IL6P05231 212 aa6.32□□□□□ -1.4
BRCA1-214ENST00000477152 IGHV4-31P0DP07 118 aa6.32□□□□□ -1.4
BRCA1-214ENST00000477152 CDH2P19022 906 aaPredicted RBP6.32□□□□□ -1.4
BRCA1-214ENST00000477152 PTNP21246 168 aa6.32□□□□□ -1.4
BRCA1-214ENST00000477152 SRP14P37108 136 aaKnown RBP6.32□□□□□ -1.4
BRCA1-214ENST00000477152 SLC1A6P48664 564 aa6.32□□□□□ -1.4
BRCA1-214ENST00000477152 IDH3GP51553 393 aaPredicted RBP6.32□□□□□ -1.4
BRCA1-214ENST00000477152 EPS8Q12929 822 aa6.32□□□□□ -1.4
BRCA1-214ENST00000477152 STX3Q13277 289 aa6.32□□□□□ -1.4
BRCA1-214ENST00000477152 C1DQ13901 141 aaKnown RBP6.32□□□□□ -1.4
BRCA1-214ENST00000477152 CEACAM7Q14002 265 aa6.32□□□□□ -1.4
BRCA1-214ENST00000477152 EFNB3Q15768 340 aa6.32□□□□□ -1.4
BRCA1-214ENST00000477152 MAPK14Q16539 360 aa6.32□□□□□ -1.4
BRCA1-214ENST00000477152 FAM174BQ3ZCQ3 159 aa6.32□□□□□ -1.4
BRCA1-214ENST00000477152 TSPO2Q5TGU0 170 aa6.32□□□□□ -1.4
BRCA1-214ENST00000477152 C9orf135Q5VTT2 229 aa6.32□□□□□ -1.4
BRCA1-214ENST00000477152 PRAMEF8Q5VWM4 474 aa6.32□□□□□ -1.4
BRCA1-214ENST00000477152 PRAMEF7Q5VXH5 474 aa6.32□□□□□ -1.4
BRCA1-214ENST00000477152 ANKRD46Q86W74 232 aa6.32□□□□□ -1.4
BRCA1-214ENST00000477152 RNF130Q86XS8 419 aa6.32□□□□□ -1.4
BRCA1-214ENST00000477152 RFLNBQ8N5W9 214 aa6.32□□□□□ -1.4
BRCA1-214ENST00000477152 SLC35B4Q969S0 331 aa6.32□□□□□ -1.4
BRCA1-214ENST00000477152 SPATA25Q9BR10 227 aa6.32□□□□□ -1.4
BRCA1-214ENST00000477152 SERHL2Q9H4I8 314 aa6.32□□□□□ -1.4
BRCA1-214ENST00000477152 B3GAT2Q9NPZ5 323 aa6.32□□□□□ -1.4
BRCA1-214ENST00000477152 FBXL3Q9UKT7 428 aa6.32□□□□□ -1.4
BRCA1-214ENST00000477152 MOKQ9UQ07 419 aa6.32□□□□□ -1.4
BRCA1-214ENST00000477152 PRR14LQ5THK1 2151 aa6.32□□□□□ -1.4
BRCA1-214ENST00000477152 LIPT2A6NK58 231 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 ATP6V1G2-DDX39BF2Z307 99 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 HMGN4O00479 90 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 RFXANKO14593 260 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 TCF21O43680 179 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 SLC43A1O75387 559 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 TGFAP01135 160 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 TFPTP0C1Z6 253 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 ZNF23P17027 643 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 ZNF43P17038 809 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 PI3P19957 117 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 NPR2P20594 1047 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 ARR3P36575 388 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 SPOCK1Q08629 439 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 MFSD13AQ14CX5 517 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 TBRG1Q3YBR2 411 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 SPANXN4Q5MJ08 99 aa6.31□□□□□ -1.4
BRCA1-214ENST00000477152 MRPL2Q5T653 305 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms