RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 PRAMEF17Q5VTA0 474 aa14.95□□□□□ -0.02
TMEM53-208ENST00000476724 GUSBP11Q6P575 273 aa14.95□□□□□ -0.02
TMEM53-208ENST00000476724 APOOLQ6UXV4 268 aa14.95□□□□□ -0.02
TMEM53-208ENST00000476724 HIST3H2AQ7L7L0 130 aa14.95□□□□□ -0.02
TMEM53-208ENST00000476724 KRT74Q7RTS7 529 aa14.95□□□□□ -0.02
TMEM53-208ENST00000476724 FAM220AQ7Z4H9 259 aa14.95□□□□□ -0.02
TMEM53-208ENST00000476724 PLXDC1Q8IUK5 500 aa14.95□□□□□ -0.02
TMEM53-208ENST00000476724 ZNF321PQ8N8H1 164 aa14.95□□□□□ -0.02
TMEM53-208ENST00000476724 LSM14AQ8ND56 463 aaKnown RBP14.95□□□□□ -0.02
TMEM53-208ENST00000476724 ZNF671Q8TAW3 534 aa14.95□□□□□ -0.02
TMEM53-208ENST00000476724 HIST1H2ACQ93077 130 aa14.95□□□□□ -0.02
TMEM53-208ENST00000476724 YIPF5Q969M3 257 aa14.95□□□□□ -0.02
TMEM53-208ENST00000476724 BEX2Q9BXY8 128 aa14.95□□□□□ -0.02
TMEM53-208ENST00000476724 FKRPQ9H9S5 495 aa14.95□□□□□ -0.02
TMEM53-208ENST00000476724 AK6Q9Y3D8 172 aaKnown RBP14.95□□□□□ -0.02
TMEM53-208ENST00000476724 NUBP2Q9Y5Y2 271 aa14.95□□□□□ -0.02
TMEM53-208ENST00000476724 A0A1B0GVC2 190 aa14.94□□□□□ -0.02
TMEM53-208ENST00000476724 A0A1W2PQD3 144 aa14.94□□□□□ -0.02
TMEM53-208ENST00000476724 CPED1A4D0V7 1026 aa14.94□□□□□ -0.02
TMEM53-208ENST00000476724 A6NIN4 97 aa14.94□□□□□ -0.02
TMEM53-208ENST00000476724 TACR3P29371 465 aa14.94□□□□□ -0.02
TMEM53-208ENST00000476724 PSMB10P40306 273 aa14.94□□□□□ -0.02
TMEM53-208ENST00000476724 ARL4DP49703 201 aa14.94□□□□□ -0.02
TMEM53-208ENST00000476724 GZMKP49863 264 aa14.94□□□□□ -0.02
TMEM53-208ENST00000476724 LPAL2Q16609 132 aa14.94□□□□□ -0.02
TMEM53-208ENST00000476724 PLCZ1Q86YW0 608 aa14.94□□□□□ -0.02
TMEM53-208ENST00000476724 GHDCQ8N2G8 530 aa14.94□□□□□ -0.02
TMEM53-208ENST00000476724 OR2T4Q8NH00 348 aa14.94□□□□□ -0.02
TMEM53-208ENST00000476724 DAZLQ92904 295 aaKnown RBP14.94□□□□□ -0.02
TMEM53-208ENST00000476724 ZC3H10Q96K80 434 aaKnown RBP14.94□□□□□ -0.02
TMEM53-208ENST00000476724 LPAR4Q99677 370 aa14.94□□□□□ -0.02
TMEM53-208ENST00000476724 NOX4Q9NPH5 578 aa14.94□□□□□ -0.02
TMEM53-208ENST00000476724 ATXN7L1Q9ULK2 861 aaPredicted RBP14.94□□□□□ -0.02
TMEM53-208ENST00000476724 BDP1A6H8Y1 2624 aa14.94□□□□□ -0.02
TMEM53-208ENST00000476724 A8MUA0 341 aa14.94□□□□□ -0.02
TMEM53-208ENST00000476724 EIF4E2O60573 245 aaKnown RBP14.94□□□□□ -0.02
TMEM53-208ENST00000476724 ITGA10O75578 1167 aa14.94□□□□□ -0.02
TMEM53-208ENST00000476724 DDAH2O95865 285 aa14.94□□□□□ -0.02
TMEM53-208ENST00000476724 FOLR1P15328 257 aa14.94□□□□□ -0.02
TMEM53-208ENST00000476724 OR1D4P47884 311 aa14.94□□□□□ -0.02
TMEM53-208ENST00000476724 LTBQ06643 244 aa14.94□□□□□ -0.02
TMEM53-208ENST00000476724 TNK1Q13470 666 aa14.94□□□□□ -0.02
TMEM53-208ENST00000476724 HLA-DQA1Q5Y7H0 255 aa14.94□□□□□ -0.02
TMEM53-208ENST00000476724 UTS2BQ765I0 119 aa14.94□□□□□ -0.02
TMEM53-208ENST00000476724 NANOGNBQ7Z5D8 188 aa14.94□□□□□ -0.02
TMEM53-208ENST00000476724 DTX3Q8N9I9 347 aa14.94□□□□□ -0.02
TMEM53-208ENST00000476724 ADAD1Q96M93 576 aaKnown RBP14.94□□□□□ -0.02
TMEM53-208ENST00000476724 ADOQ96SZ5 270 aa14.94□□□□□ -0.02
TMEM53-208ENST00000476724 GON7Q9BXV9 100 aa14.94□□□□□ -0.02
TMEM53-208ENST00000476724 ZNF275Q9NSD4 429 aaPredicted RBP14.94□□□□□ -0.02
TMEM53-208ENST00000476724 PCDHGA9Q9Y5G4 932 aaKnown RBP14.94□□□□□ -0.02
TMEM53-208ENST00000476724 MPDZO75970 2070 aa14.93□□□□□ -0.02
TMEM53-208ENST00000476724 TCRBV16S1A1N1A0A5B0 115 aa14.93□□□□□ -0.02
TMEM53-208ENST00000476724 TO15178 435 aa14.93□□□□□ -0.02
TMEM53-208ENST00000476724 PRKNO60260 465 aaPredicted RBP14.93□□□□□ -0.02
TMEM53-208ENST00000476724 SERPINI2O75830 405 aa14.93□□□□□ -0.02
TMEM53-208ENST00000476724 RENP00797 406 aa14.93□□□□□ -0.02
TMEM53-208ENST00000476724 MST1P26927 711 aa14.93□□□□□ -0.02
TMEM53-208ENST00000476724 MAPK3P27361 379 aaPredicted RBP14.93□□□□□ -0.02
TMEM53-208ENST00000476724 IL12BP29460 328 aa14.93□□□□□ -0.02
TMEM53-208ENST00000476724 BTCP35070 178 aa14.93□□□□□ -0.02
TMEM53-208ENST00000476724 RPL18Q07020 188 aaKnown RBP14.93□□□□□ -0.02
TMEM53-208ENST00000476724 DYRK1AQ13627 763 aa14.93□□□□□ -0.02
TMEM53-208ENST00000476724 SLC22A10Q63ZE4 541 aa14.93□□□□□ -0.02
TMEM53-208ENST00000476724 SYT9Q86SS6 491 aa14.93□□□□□ -0.02
TMEM53-208ENST00000476724 ZNF511Q8NB15 262 aa14.93□□□□□ -0.02
TMEM53-208ENST00000476724 OR4D9Q8NGE8 314 aa14.93□□□□□ -0.02
TMEM53-208ENST00000476724 OR1L3Q8NH93 324 aa14.93□□□□□ -0.02
TMEM53-208ENST00000476724 GRPEL2Q8TAA5 225 aa14.93□□□□□ -0.02
TMEM53-208ENST00000476724 ZFAND1Q8TCF1 268 aa14.93□□□□□ -0.02
TMEM53-208ENST00000476724 DUSP23Q9BVJ7 150 aa14.93□□□□□ -0.02
TMEM53-208ENST00000476724 GTPBP2Q9BX10 602 aaKnown RBP14.93□□□□□ -0.02
TMEM53-208ENST00000476724 CCDC86Q9H6F5 360 aaKnown RBP14.93□□□□□ -0.02
TMEM53-208ENST00000476724 MCUBQ9NWR8 336 aa14.93□□□□□ -0.02
TMEM53-208ENST00000476724 AKAP7Q9P0M2 348 aaPredicted RBP14.93□□□□□ -0.02
TMEM53-208ENST00000476724 COL5A1P20908 1838 aaPredicted RBP14.93□□□□□ -0.02
TMEM53-208ENST00000476724 IFITM5A6NNB3 132 aa14.93□□□□□ -0.02
TMEM53-208ENST00000476724 HSPB2A8KAH6 182 aa14.93□□□□□ -0.02
TMEM53-208ENST00000476724 AIPO00170 330 aa14.93□□□□□ -0.02
TMEM53-208ENST00000476724 AGRPO00253 132 aa14.93□□□□□ -0.02
TMEM53-208ENST00000476724 PIN1P1O15428 100 aa14.93□□□□□ -0.02
TMEM53-208ENST00000476724 ARHGEF9O43307 516 aa14.93□□□□□ -0.02
TMEM53-208ENST00000476724 SCO2O43819 266 aa14.93□□□□□ -0.02
TMEM53-208ENST00000476724 CDC40O60508 579 aaKnown RBP eCLIP14.93□□□□□ -0.02
TMEM53-208ENST00000476724 CXCR1P25024 350 aa14.93□□□□□ -0.02
TMEM53-208ENST00000476724 RAG2P55895 527 aa14.93□□□□□ -0.02
TMEM53-208ENST00000476724 EFR3AQ14156 821 aa14.93□□□□□ -0.02
TMEM53-208ENST00000476724 HSPB2Q16082 182 aa14.93□□□□□ -0.02
TMEM53-208ENST00000476724 ZNF574Q6ZN55 896 aaPredicted RBP14.93□□□□□ -0.02
TMEM53-208ENST00000476724 CDC20BQ86Y33 519 aa14.93□□□□□ -0.02
TMEM53-208ENST00000476724 TIGD4Q8IY51 512 aa14.93□□□□□ -0.02
TMEM53-208ENST00000476724 D2HGDHQ8N465 521 aa14.93□□□□□ -0.02
TMEM53-208ENST00000476724 EID2Q8N6I1 236 aa14.93□□□□□ -0.02
TMEM53-208ENST00000476724 TSLPQ969D9 159 aa14.93□□□□□ -0.02
TMEM53-208ENST00000476724 DERL3Q96Q80 235 aa14.93□□□□□ -0.02
TMEM53-208ENST00000476724 GFM1Q96RP9 751 aaKnown RBP14.93□□□□□ -0.02
TMEM53-208ENST00000476724 SLITRK2Q9H156 845 aa14.93□□□□□ -0.02
TMEM53-208ENST00000476724 SMOC1Q9H4F8 434 aa14.93□□□□□ -0.02
TMEM53-208ENST00000476724 SEMA5BQ9P283 1151 aa14.93□□□□□ -0.02
TMEM53-208ENST00000476724 FBXO4Q9UKT5 387 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms