RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 PAGE3Q5JUK9 113 aa4.05□□□□□ -1.76
VPS50-212ENST00000476413 PRAMEF20Q5VT98 475 aa4.05□□□□□ -1.76
VPS50-212ENST00000476413 RNF165Q6ZSG1 346 aa4.05□□□□□ -1.76
VPS50-212ENST00000476413 NIPA1Q7RTP0 329 aa4.05□□□□□ -1.76
VPS50-212ENST00000476413 PLA2G4DQ86XP0 818 aa4.05□□□□□ -1.76
VPS50-212ENST00000476413 TMEM61Q8N0U2 210 aa4.05□□□□□ -1.76
VPS50-212ENST00000476413 SUMF2Q8NBJ7 301 aa4.05□□□□□ -1.76
VPS50-212ENST00000476413 SLC35E1Q96K37 410 aa4.05□□□□□ -1.76
VPS50-212ENST00000476413 PLIN2Q99541 437 aa4.05□□□□□ -1.76
VPS50-212ENST00000476413 TMEM59Q9BXS4 323 aa4.05□□□□□ -1.76
VPS50-212ENST00000476413 MMP26Q9NRE1 261 aa4.05□□□□□ -1.76
VPS50-212ENST00000476413 PSMC3IPQ9P2W1 217 aaPredicted RBP4.05□□□□□ -1.76
VPS50-212ENST00000476413 STARD10Q9Y365 291 aa4.05□□□□□ -1.76
VPS50-212ENST00000476413 ERVV-1B6SEH8 477 aa4.04□□□□□ -1.76
VPS50-212ENST00000476413 CCL21O00585 134 aa4.04□□□□□ -1.76
VPS50-212ENST00000476413 MOSP00540 346 aa4.04□□□□□ -1.76
VPS50-212ENST00000476413 ABOP16442 354 aa4.04□□□□□ -1.76
VPS50-212ENST00000476413 PRDX3P30048 256 aaKnown RBP4.04□□□□□ -1.76
VPS50-212ENST00000476413 FMO3P31513 532 aa4.04□□□□□ -1.76
VPS50-212ENST00000476413 ERVK-25P63136 954 aa4.04□□□□□ -1.76
VPS50-212ENST00000476413 KIAA0087Q14695 138 aa4.04□□□□□ -1.76
VPS50-212ENST00000476413 LRRC66Q68CR7 880 aa4.04□□□□□ -1.76
VPS50-212ENST00000476413 ACP7Q6ZNF0 438 aa4.04□□□□□ -1.76
VPS50-212ENST00000476413 MS4A15Q8N5U1 240 aa4.04□□□□□ -1.76
VPS50-212ENST00000476413 ZNF557Q8N988 423 aaPredicted RBP4.04□□□□□ -1.76
VPS50-212ENST00000476413 VN1R2Q8NFZ6 395 aa4.04□□□□□ -1.76
VPS50-212ENST00000476413 FANK1Q8TC84 345 aa4.04□□□□□ -1.76
VPS50-212ENST00000476413 ELMO1Q92556 727 aa4.04□□□□□ -1.76
VPS50-212ENST00000476413 LRRC58Q96CX6 371 aa4.04□□□□□ -1.76
VPS50-212ENST00000476413 NRIP2Q9BQI9 281 aa4.04□□□□□ -1.76
VPS50-212ENST00000476413 NEUROG2Q9H2A3 272 aa4.04□□□□□ -1.76
VPS50-212ENST00000476413 RANBP3Q9H6Z4 567 aaPredicted RBP4.04□□□□□ -1.76
VPS50-212ENST00000476413 ANKRA2Q9H9E1 313 aa4.04□□□□□ -1.76
VPS50-212ENST00000476413 PDFQ9HBH1 243 aa4.04□□□□□ -1.76
VPS50-212ENST00000476413 PLGRKTQ9HBL7 147 aa4.04□□□□□ -1.76
VPS50-212ENST00000476413 XCL2Q9UBD3 114 aa4.04□□□□□ -1.76
VPS50-212ENST00000476413 A8MU10 97 aa4.03□□□□□ -1.76
VPS50-212ENST00000476413 DNALI1O14645 258 aaPredicted RBP4.03□□□□□ -1.76
VPS50-212ENST00000476413 GOSR2O14653 212 aa4.03□□□□□ -1.76
VPS50-212ENST00000476413 RNF13O43567 381 aa4.03□□□□□ -1.76
VPS50-212ENST00000476413 TNFSF13O75888 250 aa4.03□□□□□ -1.76
VPS50-212ENST00000476413 TPM2P07951 284 aa4.03□□□□□ -1.76
VPS50-212ENST00000476413 CHMLP26374 656 aa4.03□□□□□ -1.76
VPS50-212ENST00000476413 HSD17B2P37059 387 aa4.03□□□□□ -1.76
VPS50-212ENST00000476413 KRTAP10-3P60369 221 aa4.03□□□□□ -1.76
VPS50-212ENST00000476413 TIMM10P62072 90 aa4.03□□□□□ -1.76
VPS50-212ENST00000476413 TGM3Q08188 693 aa4.03□□□□□ -1.76
VPS50-212ENST00000476413 KRT71Q3SY84 523 aa4.03□□□□□ -1.76
VPS50-212ENST00000476413 VAX1Q5SQQ9 334 aa4.03□□□□□ -1.76
VPS50-212ENST00000476413 SASS6Q6UVJ0 657 aa4.03□□□□□ -1.76
VPS50-212ENST00000476413 TTC5Q8N0Z6 440 aa4.03□□□□□ -1.76
VPS50-212ENST00000476413 PUSL1Q8N0Z8 303 aaKnown RBP4.03□□□□□ -1.76
VPS50-212ENST00000476413 BBS5Q8N3I7 341 aa4.03□□□□□ -1.76
VPS50-212ENST00000476413 GTPBP8Q8N3Z3 284 aaPredicted RBP4.03□□□□□ -1.76
VPS50-212ENST00000476413 DCAF4L2Q8NA75 395 aa4.03□□□□□ -1.76
VPS50-212ENST00000476413 MYDGFQ969H8 173 aa4.03□□□□□ -1.76
VPS50-212ENST00000476413 SH3GL1Q99961 368 aa4.03□□□□□ -1.76
VPS50-212ENST00000476413 SIAEQ9HAT2 523 aa4.03□□□□□ -1.76
VPS50-212ENST00000476413 EML4Q9HC35 981 aaKnown RBP4.03□□□□□ -1.76
VPS50-212ENST00000476413 N6AMT1Q9Y5N5 214 aa4.03□□□□□ -1.76
VPS50-212ENST00000476413 TDRD6O60522 2096 aaKnown RBP4.02□□□□□ -1.77
VPS50-212ENST00000476413 IGKV1D-13A0A0B4J2D9 117 aa4.02□□□□□ -1.77
VPS50-212ENST00000476413 C12orf71A8MTZ7 269 aa4.02□□□□□ -1.77
VPS50-212ENST00000476413 SGK1O00141 431 aa4.02□□□□□ -1.77
VPS50-212ENST00000476413 TSPAN13O95857 204 aa4.02□□□□□ -1.77
VPS50-212ENST00000476413 C2P06681 752 aa4.02□□□□□ -1.77
VPS50-212ENST00000476413 DUX4L4P0CJ87 422 aa4.02□□□□□ -1.77
VPS50-212ENST00000476413 DNAH10OSP0CZ25 163 aa4.02□□□□□ -1.77
VPS50-212ENST00000476413 IGKV1-13P0DP09 117 aa4.02□□□□□ -1.77
VPS50-212ENST00000476413 TOP1P11387 765 aaKnown RBP4.02□□□□□ -1.77
VPS50-212ENST00000476413 CCNE1P24864 410 aa4.02□□□□□ -1.77
VPS50-212ENST00000476413 ATP5C1P36542 298 aaKnown RBP4.02□□□□□ -1.77
VPS50-212ENST00000476413 TFPI2P48307 235 aa4.02□□□□□ -1.77
VPS50-212ENST00000476413 GBE1Q04446 702 aa4.02□□□□□ -1.77
VPS50-212ENST00000476413 GTF3C1Q12789 2109 aa4.02□□□□□ -1.77
VPS50-212ENST00000476413 LHFPL3Q86UP9 236 aa4.02□□□□□ -1.77
VPS50-212ENST00000476413 ZADH2Q8N4Q0 377 aa4.02□□□□□ -1.77
VPS50-212ENST00000476413 SPATA4Q8NEY3 305 aa4.02□□□□□ -1.77
VPS50-212ENST00000476413 B3GNT7Q8NFL0 401 aa4.02□□□□□ -1.77
VPS50-212ENST00000476413 SLC22A8Q8TCC7 542 aa4.02□□□□□ -1.77
VPS50-212ENST00000476413 NDRG1Q92597 394 aaKnown RBP4.02□□□□□ -1.77
VPS50-212ENST00000476413 HSFY1Q96LI6 401 aa4.02□□□□□ -1.77
VPS50-212ENST00000476413 ZIM3Q96PE6 472 aa4.02□□□□□ -1.77
VPS50-212ENST00000476413 RASL11BQ9BPW5 248 aa4.02□□□□□ -1.77
VPS50-212ENST00000476413 ROGDIQ9GZN7 287 aa4.02□□□□□ -1.77
VPS50-212ENST00000476413 RACGAP1Q9H0H5 632 aa4.02□□□□□ -1.77
VPS50-212ENST00000476413 SLC25A15Q9Y619 301 aa4.02□□□□□ -1.77
VPS50-212ENST00000476413 A0A0G2JN53 185 aa4.01□□□□□ -1.77
VPS50-212ENST00000476413 ZNF17P17021 662 aa4.01□□□□□ -1.77
VPS50-212ENST00000476413 TCN1P20061 433 aaPredicted RBP4.01□□□□□ -1.77
VPS50-212ENST00000476413 GPR6P46095 362 aaPredicted RBP4.01□□□□□ -1.77
VPS50-212ENST00000476413 CDH6P55285 790 aa4.01□□□□□ -1.77
VPS50-212ENST00000476413 GPX6P59796 221 aa4.01□□□□□ -1.77
VPS50-212ENST00000476413 REG3AQ06141 175 aa4.01□□□□□ -1.77
VPS50-212ENST00000476413 TGFBIQ15582 683 aa4.01□□□□□ -1.77
VPS50-212ENST00000476413 ZNF836Q6ZNA1 936 aa4.01□□□□□ -1.77
VPS50-212ENST00000476413 COX15Q7KZN9 410 aa4.01□□□□□ -1.77
VPS50-212ENST00000476413 THOC6Q86W42 341 aaKnown RBP4.01□□□□□ -1.77
VPS50-212ENST00000476413 OR1S2Q8NGQ3 325 aa4.01□□□□□ -1.77
VPS50-212ENST00000476413 RDH5Q92781 318 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms