RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 SEMA6CQ9H3T2 930 aa10.7□□□□□ -0.7
U2AF1-209ENST00000475639 EGLN3Q9H6Z9 239 aa10.7□□□□□ -0.7
U2AF1-209ENST00000475639 SNX11Q9Y5W9 270 aa10.7□□□□□ -0.7
U2AF1-209ENST00000475639 BTAF1O14981 1849 aa10.7□□□□□ -0.7
U2AF1-209ENST00000475639 C17orf112F2Z3M2 114 aa10.7□□□□□ -0.7
U2AF1-209ENST00000475639 KDELR3O43731 214 aa10.7□□□□□ -0.7
U2AF1-209ENST00000475639 MT-ND4LP03901 98 aa10.7□□□□□ -0.7
U2AF1-209ENST00000475639 GLAP06280 429 aa10.7□□□□□ -0.7
U2AF1-209ENST00000475639 MMP2P08253 660 aa10.7□□□□□ -0.7
U2AF1-209ENST00000475639 MPC1LP0DKB6 136 aa10.7□□□□□ -0.7
U2AF1-209ENST00000475639 CLDN6P56747 220 aa10.7□□□□□ -0.7
U2AF1-209ENST00000475639 TAS2R19P59542 299 aa10.7□□□□□ -0.7
U2AF1-209ENST00000475639 RPS15AP62244 130 aaKnown RBP10.7□□□□□ -0.7
U2AF1-209ENST00000475639 ACY1Q03154 408 aa10.7□□□□□ -0.7
U2AF1-209ENST00000475639 ACVR1Q04771 509 aa10.7□□□□□ -0.7
U2AF1-209ENST00000475639 ACSM1Q08AH1 577 aa10.7□□□□□ -0.7
U2AF1-209ENST00000475639 MLLT11Q13015 90 aaPredicted RBP10.7□□□□□ -0.7
U2AF1-209ENST00000475639 GPR17Q13304 367 aa10.7□□□□□ -0.7
U2AF1-209ENST00000475639 CNN3Q15417 329 aaKnown RBP10.7□□□□□ -0.7
U2AF1-209ENST00000475639 CD276Q5ZPR3 534 aa10.7□□□□□ -0.7
U2AF1-209ENST00000475639 HEPHL1Q6MZM0 1159 aa10.7□□□□□ -0.7
U2AF1-209ENST00000475639 HTR3DQ70Z44 454 aa10.7□□□□□ -0.7
U2AF1-209ENST00000475639 MDGA1Q8NFP4 955 aa10.7□□□□□ -0.7
U2AF1-209ENST00000475639 CMTM2Q8TAZ6 248 aa10.7□□□□□ -0.7
U2AF1-209ENST00000475639 KLRG1Q96E93 195 aa10.7□□□□□ -0.7
U2AF1-209ENST00000475639 TMEM19Q96HH6 336 aa10.7□□□□□ -0.7
U2AF1-209ENST00000475639 DLL4Q9NR61 685 aa10.7□□□□□ -0.7
U2AF1-209ENST00000475639 OR6C2Q9NZP2 312 aa10.7□□□□□ -0.7
U2AF1-209ENST00000475639 ARID1AO14497 2285 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 PNPP00491 289 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 SGSHP51688 502 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 TAS2R38P59533 333 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 FBXW12Q6X9E4 464 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 GPRIN1Q7Z2K8 1008 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 NANOGP1Q8N7R0 232 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 SCAMP4Q969E2 229 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 ECHDC3Q96DC8 303 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 SLC19A3Q9BZV2 496 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 ANKRD19PQ9H560 264 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 KCNK12Q9HB15 430 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 THSD1Q9NS62 852 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 FBXL2Q9UKC9 423 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 SLC7A7Q9UM01 511 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 OR1A2Q9Y585 309 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 LOC102725191A0A1B0GVB3 256 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 LRP5LA4QPB2 252 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 SELENOFO60613 162 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 PRAMEF11O60813 436 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 NMBP08949 121 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 DPP4P27487 766 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 PMPCAQ10713 525 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 DOC2AQ14183 400 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 ZNF74Q16587 644 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 TCTE1Q5JU00 501 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 ATPAF1Q5TC12 328 aaPredicted RBP10.69□□□□□ -0.7
U2AF1-209ENST00000475639 B3GLCTQ6Y288 498 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 CYB561A3Q8NBI2 242 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 STEAP2Q8NFT2 490 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 OR52N2Q8NGI0 321 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 TGIF2Q9GZN2 237 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 NLE1Q9NVX2 485 aaPredicted RBP10.69□□□□□ -0.7
U2AF1-209ENST00000475639 PPT2Q9UMR5 302 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 RPH3ALQ9UNE2 315 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 POM121CA8CG34 1229 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 PNMTP11086 282 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 CD79AP11912 226 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 MEOX2P50222 304 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 SERTAD2Q14140 314 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 HACD4Q5VWC8 232 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 CDH26Q8IXH8 852 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 OR5L1Q8NGL2 311 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 OR2M2Q96R28 347 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 MED18Q9BUE0 208 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 UFSP2Q9NUQ7 469 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 MED9Q9NWA0 146 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 PURGQ9UJV8 347 aaKnown RBP10.69□□□□□ -0.7
U2AF1-209ENST00000475639 TINAGQ9UJW2 476 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 CRYM-AS1A6NIL9 109 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 SRPX2O60687 465 aaPredicted RBP10.69□□□□□ -0.7
U2AF1-209ENST00000475639 LILRB3O75022 631 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 FGF2P09038 288 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 ATXN1LP0C7T5 689 aaKnown RBP10.69□□□□□ -0.7
U2AF1-209ENST00000475639 ACPPP15309 386 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 POU3F2P20265 443 aaPredicted RBP10.69□□□□□ -0.7
U2AF1-209ENST00000475639 ATP1B3P54709 279 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 RPS21P63220 83 aaKnown RBP10.69□□□□□ -0.7
U2AF1-209ENST00000475639 RAB30Q15771 203 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 MPPED2Q15777 294 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 TMEM71Q6P5X7 295 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 CWH43Q9H720 699 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 V9GY05 133 aa10.69□□□□□ -0.7
U2AF1-209ENST00000475639 K7EQM0 130 aa10.68□□□□□ -0.7
U2AF1-209ENST00000475639 GPR171O14626 319 aa10.68□□□□□ -0.7
U2AF1-209ENST00000475639 SIGLEC5O15389 551 aa10.68□□□□□ -0.7
U2AF1-209ENST00000475639 HLA-AP01891 365 aaKnown RBP10.68□□□□□ -0.7
U2AF1-209ENST00000475639 HLA-HP01893 362 aa10.68□□□□□ -0.7
U2AF1-209ENST00000475639 INHAP05111 366 aa10.68□□□□□ -0.7
U2AF1-209ENST00000475639 SDHBP21912 280 aa10.68□□□□□ -0.7
U2AF1-209ENST00000475639 MMP12P39900 470 aa10.68□□□□□ -0.7
U2AF1-209ENST00000475639 EMP2P54851 167 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms