RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 CTXN1P60606 82 aa13.48□□□□□ -0.25
MCF2L-224ENST00000475524 RAP1BP61224 184 aa13.48□□□□□ -0.25
MCF2L-224ENST00000475524 RPL27P61353 136 aaKnown RBP13.48□□□□□ -0.25
MCF2L-224ENST00000475524 RAP1AP62834 184 aa13.48□□□□□ -0.25
MCF2L-224ENST00000475524 CDK5Q00535 292 aa13.48□□□□□ -0.25
MCF2L-224ENST00000475524 POU3F1Q03052 451 aaPredicted RBP13.48□□□□□ -0.25
MCF2L-224ENST00000475524 NPRL3Q12980 569 aa13.48□□□□□ -0.25
MCF2L-224ENST00000475524 HSPB2Q16082 182 aa13.48□□□□□ -0.25
MCF2L-224ENST00000475524 SLC36A3Q495N2 470 aa13.48□□□□□ -0.25
MCF2L-224ENST00000475524 TMEM201Q5SNT2 666 aa13.48□□□□□ -0.25
MCF2L-224ENST00000475524 SLC27A4Q6P1M0 643 aa13.48□□□□□ -0.25
MCF2L-224ENST00000475524 THSD4Q6ZMP0 1018 aa13.48□□□□□ -0.25
MCF2L-224ENST00000475524 SLC35D2Q76EJ3 337 aa13.48□□□□□ -0.25
MCF2L-224ENST00000475524 FAM214BQ7L5A3 538 aa13.48□□□□□ -0.25
MCF2L-224ENST00000475524 FAM122BQ7Z309 247 aa13.48□□□□□ -0.25
MCF2L-224ENST00000475524 GALNT5Q7Z7M9 940 aa13.48□□□□□ -0.25
MCF2L-224ENST00000475524 GPAT4Q86UL3 456 aa13.48□□□□□ -0.25
MCF2L-224ENST00000475524 OR6K3Q8NGY3 331 aa13.48□□□□□ -0.25
MCF2L-224ENST00000475524 OR6X1Q8NH79 312 aa13.48□□□□□ -0.25
MCF2L-224ENST00000475524 FNDC8Q8TC99 324 aa13.48□□□□□ -0.25
MCF2L-224ENST00000475524 NRG4Q8WWG1 115 aa13.48□□□□□ -0.25
MCF2L-224ENST00000475524 SAMD8Q96LT4 415 aa13.48□□□□□ -0.25
MCF2L-224ENST00000475524 SNX18Q96RF0 628 aa13.48□□□□□ -0.25
MCF2L-224ENST00000475524 KATNB1Q9BVA0 655 aa13.48□□□□□ -0.25
MCF2L-224ENST00000475524 SFXN3Q9BWM7 321 aa13.48□□□□□ -0.25
MCF2L-224ENST00000475524 POLDIP3Q9BY77 421 aaKnown RBP13.48□□□□□ -0.25
MCF2L-224ENST00000475524 PRRG3Q9BZD7 231 aa13.48□□□□□ -0.25
MCF2L-224ENST00000475524 EGLN3Q9H6Z9 239 aa13.48□□□□□ -0.25
MCF2L-224ENST00000475524 OSGIN2Q9Y236 505 aa13.48□□□□□ -0.25
MCF2L-224ENST00000475524 EMC9Q9Y3B6 208 aa13.48□□□□□ -0.25
MCF2L-224ENST00000475524 ZFYVE26Q68DK2 2539 aa13.47□□□□□ -0.25
MCF2L-224ENST00000475524 ZAR1LA6NP61 321 aa13.47□□□□□ -0.25
MCF2L-224ENST00000475524 E9PQ18 207 aa13.47□□□□□ -0.25
MCF2L-224ENST00000475524 BCL10O95999 233 aa13.47□□□□□ -0.25
MCF2L-224ENST00000475524 AGTR1P30556 359 aa13.47□□□□□ -0.25
MCF2L-224ENST00000475524 GRK5P34947 590 aa13.47□□□□□ -0.25
MCF2L-224ENST00000475524 GIPRP48546 466 aa13.47□□□□□ -0.25
MCF2L-224ENST00000475524 SMSP52788 366 aa13.47□□□□□ -0.25
MCF2L-224ENST00000475524 PER3P56645 1201 aa13.47□□□□□ -0.25
MCF2L-224ENST00000475524 IL1RL1Q01638 556 aa13.47□□□□□ -0.25
MCF2L-224ENST00000475524 MRPL49Q13405 166 aaKnown RBP13.47□□□□□ -0.25
MCF2L-224ENST00000475524 SNCBQ16143 134 aa13.47□□□□□ -0.25
MCF2L-224ENST00000475524 ACKR1Q16570 336 aa13.47□□□□□ -0.25
MCF2L-224ENST00000475524 LRRC36Q1X8D7 754 aa13.47□□□□□ -0.25
MCF2L-224ENST00000475524 C4orf17Q53FE4 359 aa13.47□□□□□ -0.25
MCF2L-224ENST00000475524 FBXW10Q5XX13 1052 aa13.47□□□□□ -0.25
MCF2L-224ENST00000475524 ANKRD34AQ69YU3 496 aa13.47□□□□□ -0.25
MCF2L-224ENST00000475524 ADCK1Q86TW2 530 aa13.47□□□□□ -0.25
MCF2L-224ENST00000475524 LSRQ86X29 649 aaPredicted RBP13.47□□□□□ -0.25
MCF2L-224ENST00000475524 ARIH2OSQ8N7S6 290 aa13.47□□□□□ -0.25
MCF2L-224ENST00000475524 ZIC4Q8N9L1 334 aa13.47□□□□□ -0.25
MCF2L-224ENST00000475524 OR8D4Q8NGM9 314 aa13.47□□□□□ -0.25
MCF2L-224ENST00000475524 ZNF519Q8TB69 540 aa13.47□□□□□ -0.25
MCF2L-224ENST00000475524 ASB10Q8WXI3 467 aa13.47□□□□□ -0.25
MCF2L-224ENST00000475524 TSSK6Q9BXA6 273 aa13.47□□□□□ -0.25
MCF2L-224ENST00000475524 PLA2G12AQ9BZM1 189 aa13.47□□□□□ -0.25
MCF2L-224ENST00000475524 KALRNO60229 2985 aa13.46□□□□□ -0.25
MCF2L-224ENST00000475524 KDM4EB2RXH2 506 aaPredicted RBP13.46□□□□□ -0.25
MCF2L-224ENST00000475524 MITFO75030 526 aaPredicted RBP13.46□□□□□ -0.25
MCF2L-224ENST00000475524 ZNF432O94892 652 aa13.46□□□□□ -0.25
MCF2L-224ENST00000475524 TOXO94900 526 aa13.46□□□□□ -0.25
MCF2L-224ENST00000475524 SOX14O95416 240 aa13.46□□□□□ -0.25
MCF2L-224ENST00000475524 CNOT4O95628 575 aaKnown RBP13.46□□□□□ -0.25
MCF2L-224ENST00000475524 HMGN1P05114 100 aa13.46□□□□□ -0.25
MCF2L-224ENST00000475524 F13BP05160 661 aa13.46□□□□□ -0.25
MCF2L-224ENST00000475524 TMIGD3P0DMS9 266 aaPredicted RBP13.46□□□□□ -0.25
MCF2L-224ENST00000475524 IFNGR1P15260 489 aa13.46□□□□□ -0.25
MCF2L-224ENST00000475524 CTSSP25774 331 aa13.46□□□□□ -0.25
MCF2L-224ENST00000475524 OPRM1P35372 400 aa13.46□□□□□ -0.25
MCF2L-224ENST00000475524 VHLP40337 213 aa13.46□□□□□ -0.25
MCF2L-224ENST00000475524 HSPA13P48723 471 aa13.46□□□□□ -0.25
MCF2L-224ENST00000475524 PTGES3Q15185 160 aaKnown RBP13.46□□□□□ -0.25
MCF2L-224ENST00000475524 PGGHGQ32M88 737 aa13.46□□□□□ -0.25
MCF2L-224ENST00000475524 ARMC4Q5T2S8 1044 aa13.46□□□□□ -0.25
MCF2L-224ENST00000475524 SLX4IPQ5VYV7 408 aa13.46□□□□□ -0.25
MCF2L-224ENST00000475524 TUSC5Q8IXB3 177 aa13.46□□□□□ -0.25
MCF2L-224ENST00000475524 KDM8Q8N371 416 aa13.46□□□□□ -0.25
MCF2L-224ENST00000475524 RND1Q92730 232 aa13.46□□□□□ -0.25
MCF2L-224ENST00000475524 INTS12Q96CB8 462 aaKnown RBP13.46□□□□□ -0.25
MCF2L-224ENST00000475524 SLC25A44Q96H78 314 aaPredicted RBP13.46□□□□□ -0.25
MCF2L-224ENST00000475524 HRASLS5Q96KN8 279 aa13.46□□□□□ -0.25
MCF2L-224ENST00000475524 LRR1Q96L50 414 aa13.46□□□□□ -0.25
MCF2L-224ENST00000475524 ZNF570Q96NI8 536 aa13.46□□□□□ -0.25
MCF2L-224ENST00000475524 PITX2Q99697 317 aa13.46□□□□□ -0.25
MCF2L-224ENST00000475524 ALG12Q9BV10 488 aa13.46□□□□□ -0.25
MCF2L-224ENST00000475524 IFT27Q9BW83 186 aa13.46□□□□□ -0.25
MCF2L-224ENST00000475524 LINC00470Q9BZP3 86 aa13.46□□□□□ -0.25
MCF2L-224ENST00000475524 GRIP2Q9C0E4 1043 aa13.46□□□□□ -0.25
MCF2L-224ENST00000475524 ENKD1Q9H0I2 346 aa13.46□□□□□ -0.25
MCF2L-224ENST00000475524 GRHPRQ9UBQ7 328 aa13.46□□□□□ -0.25
MCF2L-224ENST00000475524 ZNF629Q9UEG4 869 aaPredicted RBP13.46□□□□□ -0.25
MCF2L-224ENST00000475524 NOSIPQ9Y314 301 aaKnown RBP13.46□□□□□ -0.25
MCF2L-224ENST00000475524 CCL21O00585 134 aa13.45□□□□□ -0.26
MCF2L-224ENST00000475524 DLGAP1O14490 977 aa13.45□□□□□ -0.26
MCF2L-224ENST00000475524 SLC16A6O15403 523 aa13.45□□□□□ -0.26
MCF2L-224ENST00000475524 MRPL33O75394 65 aaKnown RBP13.45□□□□□ -0.26
MCF2L-224ENST00000475524 CD8BP10966 210 aa13.45□□□□□ -0.26
MCF2L-224ENST00000475524 HLA-DOBP13765 273 aa13.45□□□□□ -0.26
MCF2L-224ENST00000475524 GNLYP22749 145 aa13.45□□□□□ -0.26
MCF2L-224ENST00000475524 KIR2DL2P43627 348 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms