RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 FLRT2O43155 660 aa13.88□□□□□ -0.19
RPUSD3-215ENST00000475470 TRIM3O75382 744 aaPredicted RBP13.88□□□□□ -0.19
RPUSD3-215ENST00000475470 KLF7O75840 302 aaPredicted RBP13.88□□□□□ -0.19
RPUSD3-215ENST00000475470 MYL9P24844 172 aa13.88□□□□□ -0.19
RPUSD3-215ENST00000475470 EDNRAP25101 427 aa13.88□□□□□ -0.19
RPUSD3-215ENST00000475470 MSX1P28360 303 aa13.88□□□□□ -0.19
RPUSD3-215ENST00000475470 SHC1P29353 583 aa13.88□□□□□ -0.19
RPUSD3-215ENST00000475470 GDI2P50395 445 aaKnown RBP13.88□□□□□ -0.19
RPUSD3-215ENST00000475470 ZNF41P51814 821 aaPredicted RBP13.88□□□□□ -0.19
RPUSD3-215ENST00000475470 DEFA1P59665 94 aa13.88□□□□□ -0.19
RPUSD3-215ENST00000475470 DEFA3P59666 94 aa13.88□□□□□ -0.19
RPUSD3-215ENST00000475470 RPL27P61353 136 aaKnown RBP13.88□□□□□ -0.19
RPUSD3-215ENST00000475470 PPP3R1P63098 170 aa13.88□□□□□ -0.19
RPUSD3-215ENST00000475470 ACKR1Q16570 336 aa13.88□□□□□ -0.19
RPUSD3-215ENST00000475470 ACSM3Q53FZ2 586 aa13.88□□□□□ -0.19
RPUSD3-215ENST00000475470 RPL22L1Q6P5R6 122 aaKnown RBP13.88□□□□□ -0.19
RPUSD3-215ENST00000475470 DBX2Q6ZNG2 339 aa13.88□□□□□ -0.19
RPUSD3-215ENST00000475470 PM20D2Q8IYS1 436 aa13.88□□□□□ -0.19
RPUSD3-215ENST00000475470 ZNF417Q8TAU3 575 aa13.88□□□□□ -0.19
RPUSD3-215ENST00000475470 SPACA9Q96E40 222 aaPredicted RBP13.88□□□□□ -0.19
RPUSD3-215ENST00000475470 ADAD1Q96M93 576 aaKnown RBP13.88□□□□□ -0.19
RPUSD3-215ENST00000475470 ZNF587Q96SQ5 575 aaPredicted RBP13.88□□□□□ -0.19
RPUSD3-215ENST00000475470 PPIL3Q9H2H8 161 aaKnown RBP13.88□□□□□ -0.19
RPUSD3-215ENST00000475470 C14orf119Q9NWQ9 140 aa13.88□□□□□ -0.19
RPUSD3-215ENST00000475470 PCDHGB2Q9Y5G2 931 aa13.88□□□□□ -0.19
RPUSD3-215ENST00000475470 TVP23AA6NH52 213 aa13.88□□□□□ -0.19
RPUSD3-215ENST00000475470 PLPP3O14495 311 aa13.88□□□□□ -0.19
RPUSD3-215ENST00000475470 SERPINA3P01011 423 aa13.88□□□□□ -0.19
RPUSD3-215ENST00000475470 CFL1P23528 166 aaKnown RBP13.88□□□□□ -0.19
RPUSD3-215ENST00000475470 FOXF1Q12946 379 aa13.88□□□□□ -0.19
RPUSD3-215ENST00000475470 CBX3Q13185 183 aa13.88□□□□□ -0.19
RPUSD3-215ENST00000475470 NTRK2Q16620 822 aa13.88□□□□□ -0.19
RPUSD3-215ENST00000475470 CCDC58Q4VC31 144 aa13.88□□□□□ -0.19
RPUSD3-215ENST00000475470 CCDC157Q569K6 752 aa13.88□□□□□ -0.19
RPUSD3-215ENST00000475470 ZMAT1Q5H9K5 638 aa13.88□□□□□ -0.19
RPUSD3-215ENST00000475470 FAM27D1Q5T7N8 215 aa13.88□□□□□ -0.19
RPUSD3-215ENST00000475470 EEF1A1P5Q5VTE0 462 aa13.88□□□□□ -0.19
RPUSD3-215ENST00000475470 MZT2AQ6P582 158 aa13.88□□□□□ -0.19
RPUSD3-215ENST00000475470 RNF32Q9H0A6 362 aa13.88□□□□□ -0.19
RPUSD3-215ENST00000475470 TXNIPQ9H3M7 391 aa13.88□□□□□ -0.19
RPUSD3-215ENST00000475470 SP140LQ9H930 580 aa13.88□□□□□ -0.19
RPUSD3-215ENST00000475470 MRPL39Q9NYK5 338 aaKnown RBP13.88□□□□□ -0.19
RPUSD3-215ENST00000475470 WIF1Q9Y5W5 379 aa13.88□□□□□ -0.19
RPUSD3-215ENST00000475470 DMDP11532 3685 aa13.87□□□□□ -0.19
RPUSD3-215ENST00000475470 B4E171 279 aa13.87□□□□□ -0.19
RPUSD3-215ENST00000475470 PSMD9O00233 223 aa13.87□□□□□ -0.19
RPUSD3-215ENST00000475470 IMPDH2P12268 514 aa13.87□□□□□ -0.19
RPUSD3-215ENST00000475470 PSMB10P40306 273 aa13.87□□□□□ -0.19
RPUSD3-215ENST00000475470 TSPAN7P41732 249 aa13.87□□□□□ -0.19
RPUSD3-215ENST00000475470 ZNF79Q15937 498 aa13.87□□□□□ -0.19
RPUSD3-215ENST00000475470 EXT1Q16394 746 aa13.87□□□□□ -0.19
RPUSD3-215ENST00000475470 ZNF517Q6ZMY9 492 aaPredicted RBP13.87□□□□□ -0.19
RPUSD3-215ENST00000475470 TIGD4Q8IY51 512 aa13.87□□□□□ -0.19
RPUSD3-215ENST00000475470 OR2Y1Q8NGV0 311 aa13.87□□□□□ -0.19
RPUSD3-215ENST00000475470 ITFG2Q969R8 447 aa13.87□□□□□ -0.19
RPUSD3-215ENST00000475470 DDIT4LQ96D03 193 aa13.87□□□□□ -0.19
RPUSD3-215ENST00000475470 ZNF700Q9H0M5 742 aa13.87□□□□□ -0.19
RPUSD3-215ENST00000475470 B3GALT1Q9Y5Z6 326 aa13.87□□□□□ -0.19
RPUSD3-215ENST00000475470 LNP1A1A4G5 178 aa13.86□□□□□ -0.19
RPUSD3-215ENST00000475470 FTCDNL1E5RQL4 147 aa13.86□□□□□ -0.19
RPUSD3-215ENST00000475470 ITGA10O75578 1167 aa13.86□□□□□ -0.19
RPUSD3-215ENST00000475470 SC5DO75845 299 aa13.86□□□□□ -0.19
RPUSD3-215ENST00000475470 AZGP1P25311 298 aaKnown RBP13.86□□□□□ -0.19
RPUSD3-215ENST00000475470 PTGDSP41222 190 aa13.86□□□□□ -0.19
RPUSD3-215ENST00000475470 DCAF12Q5T6F0 453 aa13.86□□□□□ -0.19
RPUSD3-215ENST00000475470 PXKQ7Z7A4 578 aa13.86□□□□□ -0.19
RPUSD3-215ENST00000475470 TPRA1Q86W33 373 aa13.86□□□□□ -0.19
RPUSD3-215ENST00000475470 ZNF248Q8NDW4 579 aa13.86□□□□□ -0.19
RPUSD3-215ENST00000475470 OR13C5Q8NGS8 318 aa13.86□□□□□ -0.19
RPUSD3-215ENST00000475470 OR6S1Q8NH40 331 aa13.86□□□□□ -0.19
RPUSD3-215ENST00000475470 ARL5BQ96KC2 179 aa13.86□□□□□ -0.19
RPUSD3-215ENST00000475470 FAM210AQ96ND0 272 aa13.86□□□□□ -0.19
RPUSD3-215ENST00000475470 NEURL2Q9BR09 285 aa13.86□□□□□ -0.19
RPUSD3-215ENST00000475470 SRRQ9GZT4 340 aa13.86□□□□□ -0.19
RPUSD3-215ENST00000475470 HS3ST3B1Q9Y662 390 aa13.86□□□□□ -0.19
RPUSD3-215ENST00000475470 HPGDSO60760 199 aa13.86□□□□□ -0.19
RPUSD3-215ENST00000475470 ATP6V1G1O75348 118 aa13.86□□□□□ -0.19
RPUSD3-215ENST00000475470 DLGAP3O95886 979 aa13.86□□□□□ -0.19
RPUSD3-215ENST00000475470 CELA2AP08217 269 aa13.86□□□□□ -0.19
RPUSD3-215ENST00000475470 TACSTD2P09758 323 aa13.86□□□□□ -0.19
RPUSD3-215ENST00000475470 TFPIP10646 304 aa13.86□□□□□ -0.19
RPUSD3-215ENST00000475470 COX6A1P12074 109 aa13.86□□□□□ -0.19
RPUSD3-215ENST00000475470 FOLR3P41439 243 aa13.86□□□□□ -0.19
RPUSD3-215ENST00000475470 CASP3P42574 277 aa13.86□□□□□ -0.19
RPUSD3-215ENST00000475470 DLX5P56178 289 aa13.86□□□□□ -0.19
RPUSD3-215ENST00000475470 MFSD13AQ14CX5 517 aa13.86□□□□□ -0.19
RPUSD3-215ENST00000475470 OR7A5Q15622 319 aa13.86□□□□□ -0.19
RPUSD3-215ENST00000475470 GLYR1Q49A26 553 aaPredicted RBP13.86□□□□□ -0.19
RPUSD3-215ENST00000475470 IDNKQ5T6J7 187 aa13.86□□□□□ -0.19
RPUSD3-215ENST00000475470 PAMR1Q6UXH9 720 aa13.86□□□□□ -0.19
RPUSD3-215ENST00000475470 OR6N2Q8NGY6 317 aa13.86□□□□□ -0.19
RPUSD3-215ENST00000475470 MFSD8Q8NHS3 518 aa13.86□□□□□ -0.19
RPUSD3-215ENST00000475470 ZNF519Q8TB69 540 aa13.86□□□□□ -0.19
RPUSD3-215ENST00000475470 HTRA1Q92743 480 aa13.86□□□□□ -0.19
RPUSD3-215ENST00000475470 NXPE2Q96DL1 559 aa13.86□□□□□ -0.19
RPUSD3-215ENST00000475470 LOXL4Q96JB6 756 aa13.86□□□□□ -0.19
RPUSD3-215ENST00000475470 IMMP1LQ96LU5 166 aa13.86□□□□□ -0.19
RPUSD3-215ENST00000475470 TIGARQ9NQ88 270 aa13.86□□□□□ -0.19
RPUSD3-215ENST00000475470 LAMP5Q9UJQ1 280 aa13.86□□□□□ -0.19
RPUSD3-215ENST00000475470 PCDHGA5Q9Y5G8 931 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms