RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 ZNF136P52737 540 aa11.9□□□□□ -0.5
CCNL1-216ENST00000475298 DECR1Q16698 335 aa11.9□□□□□ -0.5
CCNL1-216ENST00000475298 AADACL4Q5VUY2 407 aa11.9□□□□□ -0.5
CCNL1-216ENST00000475298 FIGLAQ6QHK4 219 aa11.9□□□□□ -0.5
CCNL1-216ENST00000475298 MBOAT2Q6ZWT7 520 aa11.9□□□□□ -0.5
CCNL1-216ENST00000475298 ZNF761Q86XN6 746 aaPredicted RBP11.9□□□□□ -0.5
CCNL1-216ENST00000475298 TM4SF19Q96DZ7 209 aa11.9□□□□□ -0.5
CCNL1-216ENST00000475298 SDF2Q99470 211 aa11.9□□□□□ -0.5
CCNL1-216ENST00000475298 DPH1Q9BZG8 443 aa11.9□□□□□ -0.5
CCNL1-216ENST00000475298 MED20Q9H944 212 aa11.9□□□□□ -0.5
CCNL1-216ENST00000475298 CAPN10Q9HC96 672 aa11.9□□□□□ -0.5
CCNL1-216ENST00000475298 STARD5Q9NSY2 213 aa11.9□□□□□ -0.5
CCNL1-216ENST00000475298 ZFP57Q9NU63 452 aa11.9□□□□□ -0.5
CCNL1-216ENST00000475298 KCNE5Q9UJ90 142 aa11.9□□□□□ -0.5
CCNL1-216ENST00000475298 A6NCN8 305 aa11.9□□□□□ -0.51
CCNL1-216ENST00000475298 SYNDIG1LA6NDD5 238 aa11.9□□□□□ -0.51
CCNL1-216ENST00000475298 DUXAA6NLW8 204 aa11.9□□□□□ -0.51
CCNL1-216ENST00000475298 SNRPGP15A8MWD9 76 aa11.9□□□□□ -0.51
CCNL1-216ENST00000475298 B3GALT2O43825 422 aa11.9□□□□□ -0.51
CCNL1-216ENST00000475298 FGF17O60258 216 aa11.9□□□□□ -0.51
CCNL1-216ENST00000475298 ICOSLGO75144 302 aa11.9□□□□□ -0.51
CCNL1-216ENST00000475298 F12P00748 615 aaPredicted RBP11.9□□□□□ -0.51
CCNL1-216ENST00000475298 SMIM10L1P0DMW3 83 aa11.9□□□□□ -0.51
CCNL1-216ENST00000475298 ZNF35P13682 527 aa11.9□□□□□ -0.51
CCNL1-216ENST00000475298 CPMP14384 443 aa11.9□□□□□ -0.51
CCNL1-216ENST00000475298 ATF1P18846 271 aa11.9□□□□□ -0.51
CCNL1-216ENST00000475298 MAPK3P27361 379 aaPredicted RBP11.9□□□□□ -0.51
CCNL1-216ENST00000475298 HTR2AP28223 471 aa11.9□□□□□ -0.51
CCNL1-216ENST00000475298 CTHP32929 405 aa11.9□□□□□ -0.51
CCNL1-216ENST00000475298 AKR1C2P52895 323 aa11.9□□□□□ -0.51
CCNL1-216ENST00000475298 PPP1CAP62136 330 aa11.9□□□□□ -0.51
CCNL1-216ENST00000475298 AKR1C1Q04828 323 aa11.9□□□□□ -0.51
CCNL1-216ENST00000475298 STX4Q12846 297 aa11.9□□□□□ -0.51
CCNL1-216ENST00000475298 EXOSC7Q15024 291 aaKnown RBP11.9□□□□□ -0.51
CCNL1-216ENST00000475298 PGGHGQ32M88 737 aa11.9□□□□□ -0.51
CCNL1-216ENST00000475298 ACER2Q5QJU3 275 aa11.9□□□□□ -0.51
CCNL1-216ENST00000475298 DCAF12L2Q5VW00 463 aa11.9□□□□□ -0.51
CCNL1-216ENST00000475298 FIGNL1Q6PIW4 674 aa11.9□□□□□ -0.51
CCNL1-216ENST00000475298 UQCC3Q6UW78 93 aa11.9□□□□□ -0.51
CCNL1-216ENST00000475298 PFN4Q8NHR9 129 aa11.9□□□□□ -0.51
CCNL1-216ENST00000475298 THAP6Q8TBB0 222 aa11.9□□□□□ -0.51
CCNL1-216ENST00000475298 FAM3CQ92520 227 aa11.9□□□□□ -0.51
CCNL1-216ENST00000475298 SMIM10Q96HG1 83 aa11.9□□□□□ -0.51
CCNL1-216ENST00000475298 ART5Q96L15 291 aa11.9□□□□□ -0.51
CCNL1-216ENST00000475298 MRGPRX1Q96LB2 322 aa11.9□□□□□ -0.51
CCNL1-216ENST00000475298 SERINC2Q96SA4 455 aa11.9□□□□□ -0.51
CCNL1-216ENST00000475298 UTP23Q9BRU9 249 aaKnown RBP11.9□□□□□ -0.51
CCNL1-216ENST00000475298 FAM117AQ9C073 453 aa11.9□□□□□ -0.51
CCNL1-216ENST00000475298 MTHFD2LQ9H903 347 aaPredicted RBP11.9□□□□□ -0.51
CCNL1-216ENST00000475298 HINT3Q9NQE9 182 aaKnown RBP11.9□□□□□ -0.51
CCNL1-216ENST00000475298 C20orf141Q9NUB4 165 aa11.9□□□□□ -0.51
CCNL1-216ENST00000475298 GHRLQ9UBU3 117 aa11.9□□□□□ -0.51
CCNL1-216ENST00000475298 SC5DO75845 299 aa11.89□□□□□ -0.51
CCNL1-216ENST00000475298 IL5P05113 134 aa11.89□□□□□ -0.51
CCNL1-216ENST00000475298 KLK3P07288 261 aaPredicted RBP11.89□□□□□ -0.51
CCNL1-216ENST00000475298 ZGLP1P0C6A0 271 aa11.89□□□□□ -0.51
CCNL1-216ENST00000475298 RPA2P15927 270 aa11.89□□□□□ -0.51
CCNL1-216ENST00000475298 NDUFS1P28331 727 aa11.89□□□□□ -0.51
CCNL1-216ENST00000475298 GPX4P36969 197 aaPredicted RBP11.89□□□□□ -0.51
CCNL1-216ENST00000475298 GCGRP47871 477 aa11.89□□□□□ -0.51
CCNL1-216ENST00000475298 NPBWR1P48145 328 aa11.89□□□□□ -0.51
CCNL1-216ENST00000475298 CAPZA1P52907 286 aa11.89□□□□□ -0.51
CCNL1-216ENST00000475298 EEF1A1P68104 462 aaKnown RBP11.89□□□□□ -0.51
CCNL1-216ENST00000475298 SRSF5Q13243 272 aaKnown RBP11.89□□□□□ -0.51
CCNL1-216ENST00000475298 ALG11Q2TAA5 492 aa11.89□□□□□ -0.51
CCNL1-216ENST00000475298 ARHGAP11BQ3KRB8 267 aa11.89□□□□□ -0.51
CCNL1-216ENST00000475298 LINC00303Q3SY05 128 aa11.89□□□□□ -0.51
CCNL1-216ENST00000475298 ZNF542PQ5EBM4 170 aa11.89□□□□□ -0.51
CCNL1-216ENST00000475298 C10orf91Q5T1B1 145 aa11.89□□□□□ -0.51
CCNL1-216ENST00000475298 APOOLQ6UXV4 268 aa11.89□□□□□ -0.51
CCNL1-216ENST00000475298 PGAP1Q75T13 922 aa11.89□□□□□ -0.51
CCNL1-216ENST00000475298 CPOQ8IVL8 374 aa11.89□□□□□ -0.51
CCNL1-216ENST00000475298 GJD3Q8N144 294 aa11.89□□□□□ -0.51
CCNL1-216ENST00000475298 OSTF1Q92882 214 aa11.89□□□□□ -0.51
CCNL1-216ENST00000475298 MFFQ9GZY8 342 aa11.89□□□□□ -0.51
CCNL1-216ENST00000475298 WDR13Q9H1Z4 485 aa11.89□□□□□ -0.51
CCNL1-216ENST00000475298 TCEAL2Q9H3H9 227 aaPredicted RBP11.89□□□□□ -0.51
CCNL1-216ENST00000475298 PIGMQ9H3S5 423 aa11.89□□□□□ -0.51
CCNL1-216ENST00000475298 PLEKHA1Q9HB21 404 aa11.89□□□□□ -0.51
CCNL1-216ENST00000475298 BRWD1Q9NSI6 2320 aa11.89□□□□□ -0.51
CCNL1-216ENST00000475298 H0YGG7 62 aa11.89□□□□□ -0.51
CCNL1-216ENST00000475298 J3QRE1 110 aa11.89□□□□□ -0.51
CCNL1-216ENST00000475298 WRBO00258 174 aa11.89□□□□□ -0.51
CCNL1-216ENST00000475298 HCRTR1O43613 425 aa11.89□□□□□ -0.51
CCNL1-216ENST00000475298 RAD1O60671 282 aa11.89□□□□□ -0.51
CCNL1-216ENST00000475298 ITGA10O75578 1167 aa11.89□□□□□ -0.51
CCNL1-216ENST00000475298 STAT5AP42229 794 aa11.89□□□□□ -0.51
CCNL1-216ENST00000475298 MECP2P51608 486 aaKnown RBP11.89□□□□□ -0.51
CCNL1-216ENST00000475298 DLX5P56178 289 aa11.89□□□□□ -0.51
CCNL1-216ENST00000475298 ARF3P61204 181 aaPredicted RBP11.89□□□□□ -0.51
CCNL1-216ENST00000475298 BDH1Q02338 343 aa11.89□□□□□ -0.51
CCNL1-216ENST00000475298 KIR2DS3Q14952 304 aa11.89□□□□□ -0.51
CCNL1-216ENST00000475298 FAAP20Q6NZ36 180 aa11.89□□□□□ -0.51
CCNL1-216ENST00000475298 SIRT6Q8N6T7 355 aa11.89□□□□□ -0.51
CCNL1-216ENST00000475298 PRSS27Q9BQR3 290 aa11.89□□□□□ -0.51
CCNL1-216ENST00000475298 GINS4Q9BRT9 223 aa11.89□□□□□ -0.51
CCNL1-216ENST00000475298 PILRAQ9UKJ1 303 aa11.89□□□□□ -0.51
CCNL1-216ENST00000475298 ZNF729A6NN14 1252 aaPredicted RBP11.88□□□□□ -0.51
CCNL1-216ENST00000475298 HEXAP06865 529 aa11.88□□□□□ -0.51
CCNL1-216ENST00000475298 CTSBP07858 339 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms