RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 SLCO4C1Q6ZQN7 724 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 OR11L1Q8NGX0 322 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 LGALS14Q8TCE9 139 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 PCNPQ8WW12 178 aaKnown RBP10.14□□□□□ -0.79
VAPB-204ENST00000475243 ADAMTS14Q8WXS8 1223 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 FER1L6-AS2Q96M78 137 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 TPPP3Q9BW30 176 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 SCN9AQ15858 1988 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 P2RX6O15547 441 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 CACNG3O60359 315 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 MRPS14O60783 128 aaKnown RBP10.14□□□□□ -0.79
VAPB-204ENST00000475243 CLEC3BP05452 202 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 GPR85P60893 370 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 SLC35A1P78382 337 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 GPR176Q14439 515 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 MSMO1Q15800 293 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 GLYR1Q49A26 553 aaPredicted RBP10.14□□□□□ -0.79
VAPB-204ENST00000475243 OR5AS1Q8N127 324 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 WFDC5Q8TCV5 224 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 TCTEX1D2Q8WW35 142 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 TMEM106AQ96A25 262 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 ZIC5Q96T25 663 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 CPPED1Q9BRF8 314 aaPredicted RBP10.14□□□□□ -0.79
VAPB-204ENST00000475243 SPHK1Q9NYA1 384 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 PADI1Q9ULC6 663 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 ZNF587BE7ETH6 402 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 K7EPK0 472 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 RAB40ALP0C0E4 278 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 DEFA4P12838 97 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 CRMP1Q14194 572 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 B3GNT9Q6UX72 402 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 FAM71E2Q8N5Q1 922 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 RBMXL3Q8N7X1 1067 aaKnown RBP10.14□□□□□ -0.79
VAPB-204ENST00000475243 SUMF1Q8NBK3 374 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 RAB40AQ8WXH6 277 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 AMDHD1Q96NU7 426 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 WDR76Q9H967 626 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 GNB4Q9HAV0 340 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 MRPS28Q9Y2Q9 187 aaKnown RBP10.14□□□□□ -0.79
VAPB-204ENST00000475243 TMEM82A0PJX8 343 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 HCRTR1O43613 425 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 BCL6P41182 706 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 AGFG1P52594 562 aaKnown RBP10.14□□□□□ -0.79
VAPB-204ENST00000475243 ZNF468Q5VIY5 522 aaPredicted RBP10.14□□□□□ -0.79
VAPB-204ENST00000475243 RPL22L1Q6P5R6 122 aaKnown RBP10.14□□□□□ -0.79
VAPB-204ENST00000475243 RNF113BQ8IZP6 322 aaKnown RBP10.14□□□□□ -0.79
VAPB-204ENST00000475243 PLPP7Q8NBV4 271 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 UPRTQ96BW1 309 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 NKX3-1Q99801 234 aaPredicted RBP10.14□□□□□ -0.79
VAPB-204ENST00000475243 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.14□□□□□ -0.797e-11■■■■■ 38.1
VAPB-204ENST00000475243 LANCL2Q9NS86 450 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 TXNL4BQ9NX01 149 aaKnown RBP10.14□□□□□ -0.79
VAPB-204ENST00000475243 TRIP12Q14669 1992 aaPredicted RBP10.14□□□□□ -0.79
VAPB-204ENST00000475243 H0Y8G0 127 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 SELENOFO60613 162 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 MTHFD2P13995 350 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 SERPINF1P36955 418 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 RRADP55042 308 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 RNF4P78317 190 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 MFAP5Q13361 173 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 EBPQ15125 230 aaKnown RBP10.14□□□□□ -0.79
VAPB-204ENST00000475243 ZNF511Q8NB15 262 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 DRAXINQ8NBI3 349 aaPredicted RBP10.14□□□□□ -0.79
VAPB-204ENST00000475243 OR4A16Q8NH70 328 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 NUDT8Q8WV74 236 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 PIGTQ969N2 578 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 EMC6Q9BV81 110 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 FOXQ1Q9C009 403 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 LIN7BQ9HAP6 207 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 CLDN1O95832 211 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 TPOP07202 933 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 ANXA7P20073 488 aaKnown RBP10.13□□□□□ -0.79
VAPB-204ENST00000475243 M6PRP20645 277 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 AKR1C1Q04828 323 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 SLC14A2Q15849 920 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 DUSP7Q16829 419 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 Q6ZTK2 550 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 FJX1Q86VR8 437 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 OR52I1Q8NGK6 324 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 CENPOQ9BU64 300 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 TCEAL2Q9H3H9 227 aaPredicted RBP10.13□□□□□ -0.79
VAPB-204ENST00000475243 PUS1Q9Y606 427 aaKnown RBP eCLIP10.13□□□□□ -0.79
VAPB-204ENST00000475243 KCNK5O95279 499 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 CALCBP10092 127 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 HTR2CP28335 458 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 DLX5P56178 289 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 PHLDA2Q53GA4 152 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 BRICD5Q6PL45 260 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 ZNF687Q8N1G0 1237 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 FRMD1Q8N878 549 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 UBE2FQ969M7 185 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 PDXPQ96GD0 296 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 A0A1B0GWA3 101 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 GPR137BO60478 399 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 OR2T7P0C7T2 308 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 SLC2A1P11166 492 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 RELAQ04206 551 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 BAXQ07812 192 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 ZNF169Q14929 603 aaPredicted RBP10.13□□□□□ -0.79
VAPB-204ENST00000475243 RTL10Q7L3V2 364 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms