RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 NLGN4YQ8NFZ3 816 aaPredicted RBP8.87□□□□□ -0.99
USP39-214ENST00000474572 OR2I1PQ8NGU4 316 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 OR6K6Q8NGW6 343 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 ELP5Q8TE02 316 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 DUSP19Q8WTR2 217 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 SNX33Q8WV41 574 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 HTRA1Q92743 480 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 NTNG2Q96CW9 530 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 CTRCQ99895 268 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 CRB3Q9BUF7 120 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 TXNIPQ9H3M7 391 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 INIPQ9NRY2 104 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 RYDENQ9NUL5 291 aaKnown RBP8.87□□□□□ -0.99
USP39-214ENST00000474572 ACOXLQ9NUZ1 547 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 COMMD3Q9UBI1 195 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 HRH3Q9Y5N1 445 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 ARPC4-TTLL3A0A0A6YYG9 625 aa8.86□□□□□ -0.99
USP39-214ENST00000474572 A0A1W2PQ09 198 aa8.86□□□□□ -0.99
USP39-214ENST00000474572 A0A1W2PRG6 482 aa8.86□□□□□ -0.99
USP39-214ENST00000474572 PLPP3O14495 311 aa8.86□□□□□ -0.99
USP39-214ENST00000474572 PHYHO14832 338 aa8.86□□□□□ -0.99
USP39-214ENST00000474572 KHNYNO15037 678 aaKnown RBP8.86□□□□□ -0.99
USP39-214ENST00000474572 SSX4O60224 188 aa8.86□□□□□ -0.99
USP39-214ENST00000474572 TRIM3O75382 744 aaPredicted RBP8.86□□□□□ -0.99
USP39-214ENST00000474572 ARL6IP5O75915 188 aa8.86□□□□□ -0.99
USP39-214ENST00000474572 AHSA1O95433 338 aa8.86□□□□□ -0.99
USP39-214ENST00000474572 NUDT14O95848 222 aa8.86□□□□□ -0.99
USP39-214ENST00000474572 DLGAP3O95886 979 aa8.86□□□□□ -0.99
USP39-214ENST00000474572 GP1BAP07359 652 aa8.86□□□□□ -0.99
USP39-214ENST00000474572 SYPP08247 313 aa8.86□□□□□ -0.99
USP39-214ENST00000474572 ZNF28P17035 718 aa8.86□□□□□ -0.99
USP39-214ENST00000474572 ALOX5APP20292 161 aa8.86□□□□□ -0.99
USP39-214ENST00000474572 EDNRAP25101 427 aa8.86□□□□□ -0.99
USP39-214ENST00000474572 AZGP1P25311 298 aaKnown RBP8.86□□□□□ -0.99
USP39-214ENST00000474572 GRPRP30550 384 aa8.86□□□□□ -0.99
USP39-214ENST00000474572 BLVRAP53004 296 aa8.86□□□□□ -0.99
USP39-214ENST00000474572 EGR3Q06889 387 aa8.86□□□□□ -0.99
USP39-214ENST00000474572 SCN1BQ07699 218 aa8.86□□□□□ -0.99
USP39-214ENST00000474572 MFSD13AQ14CX5 517 aa8.86□□□□□ -0.99
USP39-214ENST00000474572 NTRK2Q16620 822 aa8.86□□□□□ -0.99
USP39-214ENST00000474572 TRIM61Q5EBN2 209 aa8.86□□□□□ -0.99
USP39-214ENST00000474572 CEP78Q5JTW2 689 aa8.86□□□□□ -0.99
USP39-214ENST00000474572 PHF19Q5T6S3 580 aa8.86□□□□□ -0.99
USP39-214ENST00000474572 FAM27D1Q5T7N8 215 aa8.86□□□□□ -0.99
USP39-214ENST00000474572 OR6V1Q8N148 313 aa8.86□□□□□ -0.99
USP39-214ENST00000474572 OR8H2Q8N162 312 aa8.86□□□□□ -0.99
USP39-214ENST00000474572 SCAIQ8N9R8 606 aa8.86□□□□□ -0.99
USP39-214ENST00000474572 ZNF511Q8NB15 262 aa8.86□□□□□ -0.99
USP39-214ENST00000474572 AGBL5Q8NDL9 886 aa8.86□□□□□ -0.99
USP39-214ENST00000474572 IL17RDQ8NFM7 739 aa8.86□□□□□ -0.99
USP39-214ENST00000474572 OR13C5Q8NGS8 318 aa8.86□□□□□ -0.99
USP39-214ENST00000474572 MFSD8Q8NHS3 518 aa8.86□□□□□ -0.99
USP39-214ENST00000474572 SLC22A8Q8TCC7 542 aa8.86□□□□□ -0.99
USP39-214ENST00000474572 ZC3HAV1LQ96H79 300 aaKnown RBP8.86□□□□□ -0.99
USP39-214ENST00000474572 MAP6Q96JE9 813 aa8.86□□□□□ -0.99
USP39-214ENST00000474572 TSSK2Q96PF2 358 aa8.86□□□□□ -0.99
USP39-214ENST00000474572 KCNJ15Q99712 375 aa8.86□□□□□ -0.99
USP39-214ENST00000474572 POTEKPQ9BYX7 375 aa8.86□□□□□ -0.99
USP39-214ENST00000474572 TTTY10Q9BZA0 68 aa8.86□□□□□ -0.99
USP39-214ENST00000474572 CCDC86Q9H6F5 360 aaKnown RBP8.86□□□□□ -0.99
USP39-214ENST00000474572 WDR76Q9H967 626 aa8.86□□□□□ -0.99
USP39-214ENST00000474572 TIGARQ9NQ88 270 aa8.86□□□□□ -0.99
USP39-214ENST00000474572 CYSLTR2Q9NS75 346 aa8.86□□□□□ -0.99
USP39-214ENST00000474572 NPAP1Q9NZP6 1156 aa8.86□□□□□ -0.99
USP39-214ENST00000474572 MYOTQ9UBF9 498 aa8.86□□□□□ -0.99
USP39-214ENST00000474572 MRM2Q9UI43 246 aaKnown RBP8.86□□□□□ -0.99
USP39-214ENST00000474572 GNG8Q9UK08 70 aa8.86□□□□□ -0.99
USP39-214ENST00000474572 KLHDC2Q9Y2U9 406 aa8.86□□□□□ -0.99
USP39-214ENST00000474572 IGLV1-36A0A0B4J1U3 117 aa8.85□□□□□ -0.99
USP39-214ENST00000474572 TRBV2A0A0J9YWF9 115 aa8.85□□□□□ -0.99
USP39-214ENST00000474572 TRBV5-5A0A0J9YX44 114 aa8.85□□□□□ -0.99
USP39-214ENST00000474572 PRSS37A4D1T9 235 aa8.85□□□□□ -0.99
USP39-214ENST00000474572 NOTOA8MTQ0 251 aa8.85□□□□□ -0.99
USP39-214ENST00000474572 MAGEB4O15481 346 aaPredicted RBP8.85□□□□□ -0.99
USP39-214ENST00000474572 PLA2G10O15496 165 aa8.85□□□□□ -0.99
USP39-214ENST00000474572 TMCC2O75069 709 aa8.85□□□□□ -0.99
USP39-214ENST00000474572 AKR7A3O95154 331 aa8.85□□□□□ -0.99
USP39-214ENST00000474572 TACSTD2P09758 323 aa8.85□□□□□ -0.99
USP39-214ENST00000474572 ELK1P19419 428 aa8.85□□□□□ -0.99
USP39-214ENST00000474572 RAB3BP20337 219 aa8.85□□□□□ -0.99
USP39-214ENST00000474572 ACP1P24666 158 aa8.85□□□□□ -0.99
USP39-214ENST00000474572 OR10A3P58181 314 aa8.85□□□□□ -0.99
USP39-214ENST00000474572 NANOS3P60323 173 aaKnown RBP8.85□□□□□ -0.99
USP39-214ENST00000474572 INSM1Q01101 510 aaPredicted RBP8.85□□□□□ -0.99
USP39-214ENST00000474572 ALKBH1Q13686 389 aaKnown RBP8.85□□□□□ -0.99
USP39-214ENST00000474572 ACKR1Q16570 336 aa8.85□□□□□ -0.99
USP39-214ENST00000474572 YIF1BQ5BJH7 314 aa8.85□□□□□ -0.99
USP39-214ENST00000474572 FDX2Q6P4F2 183 aa8.85□□□□□ -0.99
USP39-214ENST00000474572 GHDCQ8N2G8 530 aa8.85□□□□□ -0.99
USP39-214ENST00000474572 TMEM105Q8N8V8 129 aa8.85□□□□□ -0.99
USP39-214ENST00000474572 DTWD2Q8NBA8 298 aa8.85□□□□□ -0.99
USP39-214ENST00000474572 ZBTB44Q8NCP5 570 aa8.85□□□□□ -0.99
USP39-214ENST00000474572 ZNF417Q8TAU3 575 aa8.85□□□□□ -0.99
USP39-214ENST00000474572 RGP1Q92546 391 aaPredicted RBP8.85□□□□□ -0.99
USP39-214ENST00000474572 RNF31Q96EP0 1072 aa8.85□□□□□ -0.99
USP39-214ENST00000474572 MRGPRX4Q96LA9 322 aa8.85□□□□□ -0.99
USP39-214ENST00000474572 KLHL15Q96M94 604 aa8.85□□□□□ -0.99
USP39-214ENST00000474572 CMTM3Q96MX0 182 aa8.85□□□□□ -0.99
USP39-214ENST00000474572 FRMD6Q96NE9 622 aa8.85□□□□□ -0.99
USP39-214ENST00000474572 ZNF587Q96SQ5 575 aaPredicted RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms