RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 P2RY4P51582 365 aa18.24■□□□□ 0.51
CDHR3-210ENST00000474330 CSNK2A1P68400 391 aaPredicted RBP18.24■□□□□ 0.51
CDHR3-210ENST00000474330 H3F3AP84243 136 aa18.24■□□□□ 0.51
CDHR3-210ENST00000474330 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.24■□□□□ 0.51
CDHR3-210ENST00000474330 SLC10A1Q14973 349 aa18.24■□□□□ 0.51
CDHR3-210ENST00000474330 PAQR6Q6TCH4 344 aa18.24■□□□□ 0.51
CDHR3-210ENST00000474330 AHSA2Q719I0 299 aa18.24■□□□□ 0.51
CDHR3-210ENST00000474330 GGNQ86UU5 652 aa18.24■□□□□ 0.51
CDHR3-210ENST00000474330 RASD2Q96D21 266 aa18.24■□□□□ 0.51
CDHR3-210ENST00000474330 COPS4Q9BT78 406 aa18.24■□□□□ 0.51
CDHR3-210ENST00000474330 TXNIPQ9H3M7 391 aa18.24■□□□□ 0.51
CDHR3-210ENST00000474330 ERVK-18Q9QC07 812 aa18.24■□□□□ 0.51
CDHR3-210ENST00000474330 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.24■□□□□ 0.51
CDHR3-210ENST00000474330 SPTA1P02549 2419 aa18.24■□□□□ 0.51
CDHR3-210ENST00000474330 KIAA1549Q9HCM3 1950 aa18.23■□□□□ 0.51
CDHR3-210ENST00000474330 EFCAB10A6NFE3 127 aa18.23■□□□□ 0.51
CDHR3-210ENST00000474330 NPIPB13A6NJU9 1138 aa18.23■□□□□ 0.51
CDHR3-210ENST00000474330 NPIPB4C9JG80 1138 aa18.23■□□□□ 0.51
CDHR3-210ENST00000474330 M0R3G1 203 aa18.23■□□□□ 0.51
CDHR3-210ENST00000474330 DNPH1O43598 174 aa18.23■□□□□ 0.51
CDHR3-210ENST00000474330 EIF1BO60739 113 aaKnown RBP18.23■□□□□ 0.51
CDHR3-210ENST00000474330 PIPP12273 146 aaPredicted RBP18.23■□□□□ 0.51
CDHR3-210ENST00000474330 POU3F2P20265 443 aaPredicted RBP18.23■□□□□ 0.51
CDHR3-210ENST00000474330 PAICSP22234 425 aaKnown RBP18.23■□□□□ 0.51
CDHR3-210ENST00000474330 ACVR2AP27037 513 aa18.23■□□□□ 0.51
CDHR3-210ENST00000474330 STARP49675 285 aa18.23■□□□□ 0.51
CDHR3-210ENST00000474330 CDH11P55287 796 aa18.23■□□□□ 0.51
CDHR3-210ENST00000474330 CLDN20P56880 219 aa18.23■□□□□ 0.51
CDHR3-210ENST00000474330 RPL27P61353 136 aaKnown RBP18.23■□□□□ 0.51
CDHR3-210ENST00000474330 ZNF91Q05481 1191 aa18.23■□□□□ 0.51
CDHR3-210ENST00000474330 PIGFQ07326 219 aa18.23■□□□□ 0.51
CDHR3-210ENST00000474330 PXKQ7Z7A4 578 aa18.23■□□□□ 0.51
CDHR3-210ENST00000474330 GID4Q8IVV7 300 aa18.23■□□□□ 0.51
CDHR3-210ENST00000474330 KDM8Q8N371 416 aa18.23■□□□□ 0.51
CDHR3-210ENST00000474330 NPEPL1Q8NDH3 523 aa18.23■□□□□ 0.51
CDHR3-210ENST00000474330 SDR9C7Q8NEX9 313 aa18.23■□□□□ 0.51
CDHR3-210ENST00000474330 C9orf43Q8TAL5 461 aaPredicted RBP18.23■□□□□ 0.51
CDHR3-210ENST00000474330 MYDGFQ969H8 173 aa18.23■□□□□ 0.51
CDHR3-210ENST00000474330 SIGLEC11Q96RL6 698 aa18.23■□□□□ 0.51
CDHR3-210ENST00000474330 MRPS18AQ9NVS2 196 aaKnown RBP18.23■□□□□ 0.51
CDHR3-210ENST00000474330 TP53TG5Q9Y2B4 290 aa18.23■□□□□ 0.51
CDHR3-210ENST00000474330 BAHCC1Q9P281 2608 aa18.23■□□□□ 0.51
CDHR3-210ENST00000474330 A0A1W2PRG6 482 aa18.23■□□□□ 0.51
CDHR3-210ENST00000474330 AQP7P3A6NL99 342 aa18.23■□□□□ 0.51
CDHR3-210ENST00000474330 TNFSF11O14788 317 aa18.23■□□□□ 0.51
CDHR3-210ENST00000474330 RGS10O43665 173 aa18.23■□□□□ 0.51
CDHR3-210ENST00000474330 TFAP2AP05549 437 aa18.23■□□□□ 0.51
CDHR3-210ENST00000474330 ZNF169Q14929 603 aaPredicted RBP18.23■□□□□ 0.51
CDHR3-210ENST00000474330 ACKR1Q16570 336 aa18.23■□□□□ 0.51
CDHR3-210ENST00000474330 RNFT1Q5M7Z0 435 aa18.23■□□□□ 0.51
CDHR3-210ENST00000474330 SPARTQ8N0X7 666 aa18.23■□□□□ 0.51
CDHR3-210ENST00000474330 ARIH2OSQ8N7S6 290 aa18.23■□□□□ 0.51
CDHR3-210ENST00000474330 CYB561A3Q8NBI2 242 aa18.23■□□□□ 0.51
CDHR3-210ENST00000474330 BBS1Q8NFJ9 593 aa18.23■□□□□ 0.51
CDHR3-210ENST00000474330 ADGRG7Q96K78 797 aa18.23■□□□□ 0.51
CDHR3-210ENST00000474330 NMNAT3Q96T66 252 aa18.23■□□□□ 0.51
CDHR3-210ENST00000474330 HCAR1Q9BXC0 346 aa18.23■□□□□ 0.51
CDHR3-210ENST00000474330 SLC6A15Q9H2J7 730 aa18.23■□□□□ 0.51
CDHR3-210ENST00000474330 ZDHHC11Q9H8X9 412 aa18.23■□□□□ 0.51
CDHR3-210ENST00000474330 LOC102725191A0A1B0GVB3 256 aa18.22■□□□□ 0.51
CDHR3-210ENST00000474330 SEC14L5O43304 696 aa18.22■□□□□ 0.51
CDHR3-210ENST00000474330 PLGP00747 810 aaPredicted RBP18.22■□□□□ 0.51
CDHR3-210ENST00000474330 CDK1P06493 297 aa18.22■□□□□ 0.51
CDHR3-210ENST00000474330 HLA-DOBP13765 273 aa18.22■□□□□ 0.51
CDHR3-210ENST00000474330 PLA2G2AP14555 144 aa18.22■□□□□ 0.51
CDHR3-210ENST00000474330 HTR1FP30939 366 aa18.22■□□□□ 0.51
CDHR3-210ENST00000474330 CDKN2AP42771 156 aaKnown RBP18.22■□□□□ 0.51
CDHR3-210ENST00000474330 SUCLG1P53597 346 aaKnown RBP18.22■□□□□ 0.51
CDHR3-210ENST00000474330 RAC3P60763 192 aa18.22■□□□□ 0.51
CDHR3-210ENST00000474330 KRR1Q13601 381 aaKnown RBP18.22■□□□□ 0.51
CDHR3-210ENST00000474330 MESTQ5EB52 335 aa18.22■□□□□ 0.51
CDHR3-210ENST00000474330 NIPAL3Q6P499 406 aa18.22■□□□□ 0.51
CDHR3-210ENST00000474330 Q6ZS92 163 aa18.22■□□□□ 0.51
CDHR3-210ENST00000474330 ASB18Q6ZVZ8 466 aa18.22■□□□□ 0.51
CDHR3-210ENST00000474330 PRSS48Q7RTY5 328 aa18.22■□□□□ 0.51
CDHR3-210ENST00000474330 OTULINQ96BN8 352 aa18.22■□□□□ 0.51
CDHR3-210ENST00000474330 MED20Q9H944 212 aa18.22■□□□□ 0.51
CDHR3-210ENST00000474330 BATF3Q9NR55 127 aa18.22■□□□□ 0.51
CDHR3-210ENST00000474330 B3GAT1Q9P2W7 334 aa18.22■□□□□ 0.51
CDHR3-210ENST00000474330 SNX5Q9Y5X3 404 aa18.22■□□□□ 0.51
CDHR3-210ENST00000474330 ZNF814B7Z6K7 855 aa18.21■□□□□ 0.51
CDHR3-210ENST00000474330 H0YC42 278 aa18.21■□□□□ 0.51
CDHR3-210ENST00000474330 EIF1AYO14602 144 aaKnown RBP18.21■□□□□ 0.51
CDHR3-210ENST00000474330 SERPINI2O75830 405 aa18.21■□□□□ 0.51
CDHR3-210ENST00000474330 LHX2P50458 406 aa18.21■□□□□ 0.51
CDHR3-210ENST00000474330 AGFG1P52594 562 aaKnown RBP18.21■□□□□ 0.51
CDHR3-210ENST00000474330 NR1H2P55055 460 aa18.21■□□□□ 0.51
CDHR3-210ENST00000474330 ST3GAL4Q11206 333 aa18.21■□□□□ 0.51
CDHR3-210ENST00000474330 TMEM225Q6GV28 225 aa18.21■□□□□ 0.51
CDHR3-210ENST00000474330 LEG1Q6P5S2 330 aa18.21■□□□□ 0.51
CDHR3-210ENST00000474330 NHLRC1Q6VVB1 395 aa18.21■□□□□ 0.51
CDHR3-210ENST00000474330 TRILQ7L0X0 811 aa18.21■□□□□ 0.51
CDHR3-210ENST00000474330 MEPCEQ7L2J0 689 aaKnown RBP18.21■□□□□ 0.51
CDHR3-210ENST00000474330 JAZF1Q86VZ6 243 aa18.21■□□□□ 0.51
CDHR3-210ENST00000474330 ZNF519Q8TB69 540 aa18.21■□□□□ 0.51
CDHR3-210ENST00000474330 OXGR1Q96P68 337 aa18.21■□□□□ 0.51
CDHR3-210ENST00000474330 NAA11Q9BSU3 229 aaPredicted RBP18.21■□□□□ 0.51
CDHR3-210ENST00000474330 NMNAT2Q9BZQ4 307 aa18.21■□□□□ 0.51
CDHR3-210ENST00000474330 CCDC90BQ9GZT6 254 aa18.21■□□□□ 0.51
CDHR3-210ENST00000474330 PCDHGB1Q9Y5G3 927 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms