RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 C10orf53Q8N6V4 93 aa9.17□□□□□ -0.94
CASC3-204ENST00000474190 CLDN22Q8N7P3 220 aa9.17□□□□□ -0.94
CASC3-204ENST00000474190 ZNF837Q96EG3 531 aaPredicted RBP9.17□□□□□ -0.94
CASC3-204ENST00000474190 SAMD8Q96LT4 415 aa9.17□□□□□ -0.94
CASC3-204ENST00000474190 TSPAN32Q96QS1 320 aa9.17□□□□□ -0.94
CASC3-204ENST00000474190 OR2M2Q96R28 347 aa9.17□□□□□ -0.94
CASC3-204ENST00000474190 CIB1Q99828 191 aa9.17□□□□□ -0.94
CASC3-204ENST00000474190 NAA11Q9BSU3 229 aaPredicted RBP9.17□□□□□ -0.94
CASC3-204ENST00000474190 BDH2Q9BUT1 245 aa9.17□□□□□ -0.94
CASC3-204ENST00000474190 EMC6Q9BV81 110 aa9.17□□□□□ -0.94
CASC3-204ENST00000474190 ASPNQ9BXN1 380 aa9.17□□□□□ -0.94
CASC3-204ENST00000474190 OR52D1Q9H346 318 aa9.17□□□□□ -0.94
CASC3-204ENST00000474190 RNPEPL1Q9HAU8 725 aa9.17□□□□□ -0.94
CASC3-204ENST00000474190 PLSCR4Q9NRQ2 329 aa9.17□□□□□ -0.94
CASC3-204ENST00000474190 GLRX2Q9NS18 164 aa9.17□□□□□ -0.94
CASC3-204ENST00000474190 USE1Q9NZ43 259 aa9.17□□□□□ -0.94
CASC3-204ENST00000474190 KLHL9Q9P2J3 617 aa9.17□□□□□ -0.94
CASC3-204ENST00000474190 ZNF346Q9UL40 294 aaKnown RBP9.17□□□□□ -0.94
CASC3-204ENST00000474190 TMCC3Q9ULS5 477 aa9.17□□□□□ -0.94
CASC3-204ENST00000474190 SLC5A6Q9Y289 635 aa9.17□□□□□ -0.94
CASC3-204ENST00000474190 RRP15Q9Y3B9 282 aaKnown RBP9.17□□□□□ -0.94
CASC3-204ENST00000474190 CDH10Q9Y6N8 788 aa9.17□□□□□ -0.94
CASC3-204ENST00000474190 MYO7BQ6PIF6 2116 aa9.17□□□□□ -0.94
CASC3-204ENST00000474190 FBN2P35556 2912 aa9.16□□□□□ -0.94
CASC3-204ENST00000474190 LRBAP50851 2863 aa9.16□□□□□ -0.94
CASC3-204ENST00000474190 ITPR2Q14571 2701 aa9.16□□□□□ -0.94
CASC3-204ENST00000474190 G3V2T6 193 aa9.16□□□□□ -0.94
CASC3-204ENST00000474190 GNGT2O14610 69 aa9.16□□□□□ -0.94
CASC3-204ENST00000474190 EI24O14681 340 aa9.16□□□□□ -0.94
CASC3-204ENST00000474190 SOX14O95416 240 aa9.16□□□□□ -0.94
CASC3-204ENST00000474190 PLGP00747 810 aaPredicted RBP9.16□□□□□ -0.94
CASC3-204ENST00000474190 SAGP10523 405 aaPredicted RBP9.16□□□□□ -0.94
CASC3-204ENST00000474190 IFNGR1P15260 489 aa9.16□□□□□ -0.94
CASC3-204ENST00000474190 PEX2P28328 305 aa9.16□□□□□ -0.94
CASC3-204ENST00000474190 OR3A2P47893 321 aa9.16□□□□□ -0.94
CASC3-204ENST00000474190 ERVK-25P63136 954 aa9.16□□□□□ -0.94
CASC3-204ENST00000474190 SIRPAP78324 504 aa9.16□□□□□ -0.94
CASC3-204ENST00000474190 EFNB1P98172 346 aa9.16□□□□□ -0.94
CASC3-204ENST00000474190 POU3F1Q03052 451 aaPredicted RBP9.16□□□□□ -0.94
CASC3-204ENST00000474190 RIPK1Q13546 671 aa9.16□□□□□ -0.94
CASC3-204ENST00000474190 MELKQ14680 651 aa9.16□□□□□ -0.94
CASC3-204ENST00000474190 SF3B4Q15427 424 aaKnown RBP eCLIP9.16□□□□□ -0.94
CASC3-204ENST00000474190 ANKDD1AQ495B1 522 aa9.16□□□□□ -0.94
CASC3-204ENST00000474190 SLC36A3Q495N2 470 aa9.16□□□□□ -0.94
CASC3-204ENST00000474190 ALG10Q5BKT4 473 aa9.16□□□□□ -0.94
CASC3-204ENST00000474190 MESTQ5EB52 335 aa9.16□□□□□ -0.94
CASC3-204ENST00000474190 OGFRL1Q5TC84 451 aaPredicted RBP9.16□□□□□ -0.94
CASC3-204ENST00000474190 LPCAT4Q643R3 524 aa9.16□□□□□ -0.94
CASC3-204ENST00000474190 TMEM225Q6GV28 225 aa9.16□□□□□ -0.94
CASC3-204ENST00000474190 ACSM5Q6NUN0 579 aa9.16□□□□□ -0.94
CASC3-204ENST00000474190 SMARCD3Q6STE5 483 aa9.16□□□□□ -0.94
CASC3-204ENST00000474190 C22orf34Q6ZV56 151 aa9.16□□□□□ -0.94
CASC3-204ENST00000474190 CHMP1BQ7LBR1 199 aa9.16□□□□□ -0.94
CASC3-204ENST00000474190 GPAT4Q86UL3 456 aa9.16□□□□□ -0.94
CASC3-204ENST00000474190 STK32CQ86UX6 486 aa9.16□□□□□ -0.94
CASC3-204ENST00000474190 HIPK1Q86Z02 1210 aa9.16□□□□□ -0.94
CASC3-204ENST00000474190 GABRG1Q8N1C3 465 aa9.16□□□□□ -0.94
CASC3-204ENST00000474190 SVOPLQ8N434 492 aa9.16□□□□□ -0.94
CASC3-204ENST00000474190 CBR4Q8N4T8 237 aa9.16□□□□□ -0.94
CASC3-204ENST00000474190 ACBD4Q8NC06 268 aa9.16□□□□□ -0.94
CASC3-204ENST00000474190 ICA1LQ8NDH6 482 aa9.16□□□□□ -0.94
CASC3-204ENST00000474190 LILRB4Q8NHJ6 448 aa9.16□□□□□ -0.94
CASC3-204ENST00000474190 ASB10Q8WXI3 467 aa9.16□□□□□ -0.94
CASC3-204ENST00000474190 RND1Q92730 232 aa9.16□□□□□ -0.94
CASC3-204ENST00000474190 HDAC2Q92769 488 aaKnown RBP9.16□□□□□ -0.94
CASC3-204ENST00000474190 ZFP3Q96NJ6 502 aa9.16□□□□□ -0.94
CASC3-204ENST00000474190 PSMG3-AS1Q96PY0 264 aa9.16□□□□□ -0.94
CASC3-204ENST00000474190 SFXN3Q9BWM7 321 aa9.16□□□□□ -0.94
CASC3-204ENST00000474190 UCK2Q9BZX2 261 aa9.16□□□□□ -0.94
CASC3-204ENST00000474190 OPN3Q9H1Y3 402 aaPredicted RBP9.16□□□□□ -0.94
CASC3-204ENST00000474190 C6orf203Q9P0P8 240 aaPredicted RBP9.16□□□□□ -0.94
CASC3-204ENST00000474190 ZNF629Q9UEG4 869 aaPredicted RBP9.16□□□□□ -0.94
CASC3-204ENST00000474190 PRSS50Q9UI38 385 aa9.16□□□□□ -0.94
CASC3-204ENST00000474190 NOX1Q9Y5S8 564 aa9.16□□□□□ -0.94
CASC3-204ENST00000474190 SPTBN1Q01082 2364 aaKnown RBP9.16□□□□□ -0.94
CASC3-204ENST00000474190 MED12LQ86YW9 2145 aa9.16□□□□□ -0.94
CASC3-204ENST00000474190 DOCK7Q96N67 2140 aa9.16□□□□□ -0.94
CASC3-204ENST00000474190 DIDO1Q9BTC0 2240 aaKnown RBP9.15□□□□□ -0.94
CASC3-204ENST00000474190 SLC35F4A4IF30 521 aa9.15□□□□□ -0.94
CASC3-204ENST00000474190 HSPB2A8KAH6 182 aa9.15□□□□□ -0.94
CASC3-204ENST00000474190 A8MXE2 369 aa9.15□□□□□ -0.94
CASC3-204ENST00000474190 ARPC3O15145 178 aa9.15□□□□□ -0.94
CASC3-204ENST00000474190 E2F6O75461 281 aa9.15□□□□□ -0.94
CASC3-204ENST00000474190 UPK3AO75631 287 aa9.15□□□□□ -0.94
CASC3-204ENST00000474190 NDUFB2O95178 105 aa9.15□□□□□ -0.94
CASC3-204ENST00000474190 IL2RAP01589 272 aa9.15□□□□□ -0.94
CASC3-204ENST00000474190 CD14P08571 375 aa9.15□□□□□ -0.94
CASC3-204ENST00000474190 PGA4P0DJD7 388 aa9.15□□□□□ -0.94
CASC3-204ENST00000474190 PGA3P0DJD8 388 aa9.15□□□□□ -0.94
CASC3-204ENST00000474190 CD8BP10966 210 aa9.15□□□□□ -0.94
CASC3-204ENST00000474190 ANXA8P13928 327 aa9.15□□□□□ -0.94
CASC3-204ENST00000474190 ZNF23P17027 643 aa9.15□□□□□ -0.94
CASC3-204ENST00000474190 GRNP28799 593 aaKnown RBP9.15□□□□□ -0.94
CASC3-204ENST00000474190 CCKARP32238 428 aa9.15□□□□□ -0.94
CASC3-204ENST00000474190 CDKN2AP42771 156 aaKnown RBP9.15□□□□□ -0.94
CASC3-204ENST00000474190 ZNF133P52736 654 aaPredicted RBP9.15□□□□□ -0.94
CASC3-204ENST00000474190 CLDN17P56750 224 aa9.15□□□□□ -0.94
CASC3-204ENST00000474190 CDK5Q00535 292 aa9.15□□□□□ -0.94
CASC3-204ENST00000474190 COX10Q12887 443 aa9.15□□□□□ -0.94
CASC3-204ENST00000474190 HSPB2Q16082 182 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms