RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 A0A087WUU8 490 aa12.11□□□□□ -0.47
USF1-205ENST00000473969 FAM221AA4D161 298 aa12.11□□□□□ -0.47
USF1-205ENST00000473969 OR5H1A6NKK0 313 aa12.11□□□□□ -0.47
USF1-205ENST00000473969 PIP5K1CO60331 668 aa12.11□□□□□ -0.47
USF1-205ENST00000473969 DNAJC8O75937 253 aaPredicted RBP12.11□□□□□ -0.47
USF1-205ENST00000473969 DIRAS1O95057 198 aa12.11□□□□□ -0.47
USF1-205ENST00000473969 PRSS23O95084 383 aa12.11□□□□□ -0.47
USF1-205ENST00000473969 GADD45GO95257 159 aa12.11□□□□□ -0.47
USF1-205ENST00000473969 HLA-DOBP13765 273 aa12.11□□□□□ -0.47
USF1-205ENST00000473969 IFNGR1P15260 489 aa12.11□□□□□ -0.47
USF1-205ENST00000473969 ATP6V1B2P21281 511 aa12.11□□□□□ -0.47
USF1-205ENST00000473969 BIDP55957 195 aa12.11□□□□□ -0.47
USF1-205ENST00000473969 ROR2Q01974 943 aaKnown RBP12.11□□□□□ -0.47
USF1-205ENST00000473969 PRKCDQ05655 676 aa12.11□□□□□ -0.47
USF1-205ENST00000473969 CHRNB3Q05901 458 aa12.11□□□□□ -0.47
USF1-205ENST00000473969 TRAP1Q12931 704 aaKnown RBP12.11□□□□□ -0.47
USF1-205ENST00000473969 BNIP1Q12981 228 aa12.11□□□□□ -0.47
USF1-205ENST00000473969 TAB1Q15750 504 aa12.11□□□□□ -0.47
USF1-205ENST00000473969 ANKDD1AQ495B1 522 aa12.11□□□□□ -0.47
USF1-205ENST00000473969 FAM98BQ52LJ0 330 aaKnown RBP12.11□□□□□ -0.47
USF1-205ENST00000473969 LCN8Q6JVE9 175 aa12.11□□□□□ -0.47
USF1-205ENST00000473969 OAFQ86UD1 273 aa12.11□□□□□ -0.47
USF1-205ENST00000473969 CDC20BQ86Y33 519 aa12.11□□□□□ -0.47
USF1-205ENST00000473969 C17orf78Q8N4C9 275 aa12.11□□□□□ -0.47
USF1-205ENST00000473969 C1orf162Q8NEQ5 155 aaPredicted RBP12.11□□□□□ -0.47
USF1-205ENST00000473969 OR52J3Q8NH60 311 aa12.11□□□□□ -0.47
USF1-205ENST00000473969 LIPHQ8WWY8 451 aa12.11□□□□□ -0.47
USF1-205ENST00000473969 TXNDC15Q96J42 360 aa12.11□□□□□ -0.47
USF1-205ENST00000473969 CLPTM1LQ96KA5 538 aa12.11□□□□□ -0.47
USF1-205ENST00000473969 LRR1Q96L50 414 aa12.11□□□□□ -0.47
USF1-205ENST00000473969 MUS81Q96NY9 551 aa12.11□□□□□ -0.47
USF1-205ENST00000473969 ALKBH3Q96Q83 286 aaPredicted RBP12.11□□□□□ -0.47
USF1-205ENST00000473969 OR2M2Q96R28 347 aa12.11□□□□□ -0.47
USF1-205ENST00000473969 ESRP2Q9H6T0 727 aaKnown RBP12.11□□□□□ -0.47
USF1-205ENST00000473969 INIPQ9NRY2 104 aa12.11□□□□□ -0.47
USF1-205ENST00000473969 MAN2C1Q9NTJ4 1040 aa12.11□□□□□ -0.47
USF1-205ENST00000473969 STX18Q9P2W9 335 aaKnown RBP12.11□□□□□ -0.47
USF1-205ENST00000473969 TMCC3Q9ULS5 477 aa12.11□□□□□ -0.47
USF1-205ENST00000473969 ANKHD1Q8IWZ3 2542 aaKnown RBP12.11□□□□□ -0.47
USF1-205ENST00000473969 M0R3G1 203 aa12.1□□□□□ -0.47
USF1-205ENST00000473969 UPK3AO75631 287 aa12.1□□□□□ -0.47
USF1-205ENST00000473969 ZNF432O94892 652 aa12.1□□□□□ -0.47
USF1-205ENST00000473969 WNT11O96014 354 aa12.1□□□□□ -0.47
USF1-205ENST00000473969 HRGP04196 525 aa12.1□□□□□ -0.47
USF1-205ENST00000473969 F13BP05160 661 aa12.1□□□□□ -0.47
USF1-205ENST00000473969 THBDP07204 575 aa12.1□□□□□ -0.47
USF1-205ENST00000473969 ITGA5P08648 1049 aa12.1□□□□□ -0.47
USF1-205ENST00000473969 IFNGR2P38484 337 aa12.1□□□□□ -0.47
USF1-205ENST00000473969 AQP2P41181 271 aa12.1□□□□□ -0.47
USF1-205ENST00000473969 CSNK1A1P48729 337 aa12.1□□□□□ -0.47
USF1-205ENST00000473969 SLC9A3P48764 834 aa12.1□□□□□ -0.47
USF1-205ENST00000473969 DAP3P51398 398 aaKnown RBP12.1□□□□□ -0.47
USF1-205ENST00000473969 SH3BGRP55822 239 aaPredicted RBP12.1□□□□□ -0.47
USF1-205ENST00000473969 PRPS1P60891 318 aa12.1□□□□□ -0.47
USF1-205ENST00000473969 UBE2NP61088 152 aaKnown RBP12.1□□□□□ -0.47
USF1-205ENST00000473969 MS4A2Q01362 244 aa12.1□□□□□ -0.47
USF1-205ENST00000473969 RPL18Q07020 188 aaKnown RBP12.1□□□□□ -0.47
USF1-205ENST00000473969 CAMK2DQ13557 499 aa12.1□□□□□ -0.47
USF1-205ENST00000473969 GABRA6Q16445 453 aa12.1□□□□□ -0.47
USF1-205ENST00000473969 ALG10Q5BKT4 473 aa12.1□□□□□ -0.47
USF1-205ENST00000473969 C1QTNF12Q5T7M4 302 aa12.1□□□□□ -0.47
USF1-205ENST00000473969 PODNL1Q6PEZ8 512 aa12.1□□□□□ -0.47
USF1-205ENST00000473969 TBPL2Q6SJ96 375 aa12.1□□□□□ -0.47
USF1-205ENST00000473969 KLHL17Q6TDP4 642 aa12.1□□□□□ -0.47
USF1-205ENST00000473969 OR52N5Q8NH56 324 aa12.1□□□□□ -0.47
USF1-205ENST00000473969 SLC7A13Q8TCU3 470 aa12.1□□□□□ -0.47
USF1-205ENST00000473969 ZNF566Q969W8 418 aa12.1□□□□□ -0.47
USF1-205ENST00000473969 PLPPR2Q96GM1 343 aa12.1□□□□□ -0.47
USF1-205ENST00000473969 MAGIXQ9H6Y5 334 aa12.1□□□□□ -0.47
USF1-205ENST00000473969 POFUT2Q9Y2G5 429 aa12.1□□□□□ -0.47
USF1-205ENST00000473969 AMDHD2Q9Y303 409 aa12.1□□□□□ -0.47
USF1-205ENST00000473969 MAGED1Q9Y5V3 778 aaPredicted RBP12.1□□□□□ -0.47
USF1-205ENST00000473969 CACNA1DQ01668 2161 aa12.09□□□□□ -0.47
USF1-205ENST00000473969 CENPEQ02224 2701 aa12.09□□□□□ -0.47
USF1-205ENST00000473969 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.09□□□□□ -0.47
USF1-205ENST00000473969 PDLIM1O00151 329 aa12.09□□□□□ -0.47
USF1-205ENST00000473969 CLOCKO15516 846 aa12.09□□□□□ -0.47
USF1-205ENST00000473969 KRT36O76013 467 aa12.09□□□□□ -0.47
USF1-205ENST00000473969 SEMG1P04279 462 aa12.09□□□□□ -0.47
USF1-205ENST00000473969 HOXB6P17509 224 aaKnown RBP12.09□□□□□ -0.47
USF1-205ENST00000473969 MAKP20794 623 aa12.09□□□□□ -0.47
USF1-205ENST00000473969 PAX7P23759 505 aa12.09□□□□□ -0.47
USF1-205ENST00000473969 RRM2P31350 389 aa12.09□□□□□ -0.47
USF1-205ENST00000473969 CLRN1P58418 232 aa12.09□□□□□ -0.47
USF1-205ENST00000473969 KRTAP10-9P60411 292 aa12.09□□□□□ -0.47
USF1-205ENST00000473969 LGALS3BPQ08380 585 aa12.09□□□□□ -0.47
USF1-205ENST00000473969 MELKQ14680 651 aa12.09□□□□□ -0.47
USF1-205ENST00000473969 LAPTM4AQ15012 233 aa12.09□□□□□ -0.47
USF1-205ENST00000473969 C22orf34Q6ZV56 151 aa12.09□□□□□ -0.47
USF1-205ENST00000473969 TSEN54Q7Z6J9 526 aaKnown RBP12.09□□□□□ -0.47
USF1-205ENST00000473969 C20orf196Q8IYI0 205 aa12.09□□□□□ -0.47
USF1-205ENST00000473969 OR4K5Q8NGD3 323 aa12.09□□□□□ -0.47
USF1-205ENST00000473969 OR51A7Q8NH64 312 aa12.09□□□□□ -0.47
USF1-205ENST00000473969 OR6X1Q8NH79 312 aa12.09□□□□□ -0.47
USF1-205ENST00000473969 SLC7A6OSQ96CW6 309 aaPredicted RBP12.09□□□□□ -0.47
USF1-205ENST00000473969 SLC25A44Q96H78 314 aaPredicted RBP12.09□□□□□ -0.47
USF1-205ENST00000473969 ULBP2Q9BZM5 246 aa12.09□□□□□ -0.47
USF1-205ENST00000473969 CRLF2Q9HC73 371 aa12.09□□□□□ -0.47
USF1-205ENST00000473969 GPR35Q9HC97 309 aa12.09□□□□□ -0.47
USF1-205ENST00000473969 SLC17A5Q9NRA2 495 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms