RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 ESX1Q8N693 406 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 EXD3Q8N9H8 876 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 OR52N1Q8NH53 320 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 M1APQ8TC57 530 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 ST8SIA1Q92185 356 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 CDC6Q99741 560 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 EMC6Q9BV81 110 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 DDA1Q9BW61 102 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 TSPAN10Q9H1Z9 355 aaPredicted RBP5.61□□□□□ -1.51
CLK1-210ENST00000473565 PPIL3Q9H2H8 161 aaKnown RBP5.61□□□□□ -1.51
CLK1-210ENST00000473565 WDR76Q9H967 626 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 INIPQ9NRY2 104 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 BABAM2Q9NXR7 383 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 RTTNQ86VV8 2226 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 A0A1W2PPK0 400 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 ZNF814B7Z6K7 855 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 H3BSH0 61 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 TP53I11O14683 189 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 AKAP8O43823 692 aaKnown RBP5.61□□□□□ -1.51
CLK1-210ENST00000473565 RAMP1O60894 148 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 UGT2B10P36537 528 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 MLF1P58340 268 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 FMODQ06828 376 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 MYBPHQ13203 477 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 TOMM20Q15388 145 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 SGCBQ16585 318 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 MEP1BQ16820 701 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 TIMM50Q3ZCQ8 353 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 TMPRSS11AQ6ZMR5 421 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 LRRC69Q6ZNQ3 347 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 SPATC1Q76KD6 591 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 MFSD4AQ8N468 514 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 HTRA1Q92743 480 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 TXNDC15Q96J42 360 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 C5orf34Q96MH7 638 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 PLGRKTQ9HBL7 147 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 AKIP1Q9NQ31 210 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 ACOXLQ9NUZ1 547 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 HPF1Q9NWY4 346 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 GALNT8Q9NY28 637 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 GNG8Q9UK08 70 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 CAB39Q9Y376 341 aaPredicted RBP5.61□□□□□ -1.51
CLK1-210ENST00000473565 PHF3Q92576 2039 aaKnown RBP5.61□□□□□ -1.51
CLK1-210ENST00000473565 A0A1W2PRG6 482 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 ZNF670-ZNF695F2Z2N8 137 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 H0YC42 278 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 MS4A18H0YCH9 400 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 GABRPO00591 440 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 SLC30A4O14863 429 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 MAGEB3O15480 346 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 GLCEO94923 617 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 IGF2P01344 180 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 IFNGR1P15260 489 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 MAGEB1P43366 347 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 POU3F1Q03052 451 aaPredicted RBP5.6□□□□□ -1.51
CLK1-210ENST00000473565 CHAF1BQ13112 559 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 HNRNPA0Q13151 305 aaKnown RBP5.6□□□□□ -1.51
CLK1-210ENST00000473565 SRSF6Q13247 344 aaKnown RBP5.6□□□□□ -1.51
CLK1-210ENST00000473565 INAQ16352 499 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 CSRP2Q16527 193 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 MS4A18Q3C1V0 323 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 TBC1D25Q3MII6 688 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 TMEM164Q5U3C3 297 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 C16orf87Q6PH81 154 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 OPN5Q6U736 354 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 TMEM91Q6ZNR0 172 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 BEST3Q8N1M1 668 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 HSD17B8Q92506 261 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 ORAI1Q96D31 301 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 THOC3Q96J01 351 aaKnown RBP5.6□□□□□ -1.51
CLK1-210ENST00000473565 OR5B2Q96R09 309 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 A0A1B0GTH9 108 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 CLDN25C9JDP6 229 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 RAD1O60671 282 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 RPP14O95059 124 aaKnown RBP5.6□□□□□ -1.51
CLK1-210ENST00000473565 MPZL1O95297 269 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 MT-ATP6P00846 226 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 MT-ND5P03915 603 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 CYC1P08574 325 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 FTH1P19P0C7X4 201 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 OR8G3PP0DMU2 310 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 CTLA4P16410 223 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 GTF2E2P29084 291 aaKnown RBP5.6□□□□□ -1.51
CLK1-210ENST00000473565 GABRA5P31644 462 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 RFC3P40938 356 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 APOBEC1P41238 236 aaKnown RBP5.6□□□□□ -1.51
CLK1-210ENST00000473565 HTR3AP46098 478 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 RPL27P61353 136 aaKnown RBP5.6□□□□□ -1.51
CLK1-210ENST00000473565 PSPHP78330 225 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 IFITM3Q01628 133 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 OC90Q02509 493 aaPredicted RBP5.6□□□□□ -1.51
CLK1-210ENST00000473565 TLE3Q04726 772 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 LGALS3BPQ08380 585 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 ZNF829Q3KNS6 432 aaPredicted RBP5.6□□□□□ -1.51
CLK1-210ENST00000473565 TMEM176BQ3YBM2 270 aaPredicted RBP5.6□□□□□ -1.51
CLK1-210ENST00000473565 SLC22A10Q63ZE4 541 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 VASH1Q7L8A9 365 aaPredicted RBP5.6□□□□□ -1.51
CLK1-210ENST00000473565 DPY19L4Q7Z388 723 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 SLC43A2Q8N370 569 aa5.6□□□□□ -1.51
CLK1-210ENST00000473565 ARIH2OSQ8N7S6 290 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms