RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 PAX1P15863 534 aa5.95□□□□□ -1.46
SCAF4-205ENST00000472318 HRH2P25021 359 aa5.95□□□□□ -1.46
SCAF4-205ENST00000472318 FDFT1P37268 417 aa5.95□□□□□ -1.46
SCAF4-205ENST00000472318 HAAOP46952 286 aa5.95□□□□□ -1.46
SCAF4-205ENST00000472318 BCAP31P51572 246 aa5.95□□□□□ -1.46
SCAF4-205ENST00000472318 CSNK2A1P68400 391 aaPredicted RBP5.95□□□□□ -1.46
SCAF4-205ENST00000472318 OGDHQ02218 1023 aa5.95□□□□□ -1.46
SCAF4-205ENST00000472318 UBE2V1Q13404 147 aa5.95□□□□□ -1.46
SCAF4-205ENST00000472318 VEZF1Q14119 521 aa5.95□□□□□ -1.46
SCAF4-205ENST00000472318 MFSD13AQ14CX5 517 aa5.95□□□□□ -1.46
SCAF4-205ENST00000472318 CLEC12BQ2HXU8 276 aa5.95□□□□□ -1.46
SCAF4-205ENST00000472318 ZNF829Q3KNS6 432 aaPredicted RBP5.95□□□□□ -1.46
SCAF4-205ENST00000472318 TMEM225Q6GV28 225 aa5.95□□□□□ -1.46
SCAF4-205ENST00000472318 UGT3A1Q6NUS8 523 aa5.95□□□□□ -1.46
SCAF4-205ENST00000472318 ZNF704Q6ZNC4 412 aaPredicted RBP5.95□□□□□ -1.46
SCAF4-205ENST00000472318 IL17RELQ6ZVW7 336 aa5.95□□□□□ -1.46
SCAF4-205ENST00000472318 TMPRSS11FQ6ZWK6 438 aa5.95□□□□□ -1.46
SCAF4-205ENST00000472318 CCDC36Q8IYA8 594 aa5.95□□□□□ -1.46
SCAF4-205ENST00000472318 SPATA6LQ8N4H0 392 aa5.95□□□□□ -1.46
SCAF4-205ENST00000472318 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.95□□□□□ -1.46
SCAF4-205ENST00000472318 CEP112Q8N8E3 955 aa5.95□□□□□ -1.46
SCAF4-205ENST00000472318 LMNTD1Q8N9Z9 388 aa5.95□□□□□ -1.46
SCAF4-205ENST00000472318 TTC29Q8NA56 475 aaPredicted RBP5.95□□□□□ -1.46
SCAF4-205ENST00000472318 ZFP62Q8NB50 900 aaPredicted RBP5.95□□□□□ -1.46
SCAF4-205ENST00000472318 CSNK2A3Q8NEV1 391 aa5.95□□□□□ -1.46
SCAF4-205ENST00000472318 GLYATL2Q8WU03 294 aa5.95□□□□□ -1.46
SCAF4-205ENST00000472318 SLC44A1Q8WWI5 657 aa5.95□□□□□ -1.46
SCAF4-205ENST00000472318 PHYHIPQ92561 330 aa5.95□□□□□ -1.46
SCAF4-205ENST00000472318 ZNF582Q96NG8 517 aaPredicted RBP5.95□□□□□ -1.46
SCAF4-205ENST00000472318 PEBP4Q96S96 227 aa5.95□□□□□ -1.46
SCAF4-205ENST00000472318 C19orf43Q9BQ61 176 aa5.95□□□□□ -1.46
SCAF4-205ENST00000472318 CNPY3Q9BT09 278 aa5.95□□□□□ -1.46
SCAF4-205ENST00000472318 ROPN1BQ9BZX4 212 aaPredicted RBP5.95□□□□□ -1.46
SCAF4-205ENST00000472318 GEMIN7Q9H840 131 aaKnown RBP5.95□□□□□ -1.46
SCAF4-205ENST00000472318 SIX2Q9NPC8 291 aa5.95□□□□□ -1.46
SCAF4-205ENST00000472318 SDHAF3Q9NRP4 125 aa5.95□□□□□ -1.46
SCAF4-205ENST00000472318 ZNF701Q9NV72 531 aaPredicted RBP5.95□□□□□ -1.46
SCAF4-205ENST00000472318 ERVK-18Q9QC07 812 aa5.95□□□□□ -1.46
SCAF4-205ENST00000472318 BCAP29Q9UHQ4 241 aa5.95□□□□□ -1.46
SCAF4-205ENST00000472318 DNAJC12Q9UKB3 198 aa5.95□□□□□ -1.46
SCAF4-205ENST00000472318 CBY1Q9Y3M2 126 aa5.95□□□□□ -1.46
SCAF4-205ENST00000472318 HEBP2Q9Y5Z4 205 aa5.95□□□□□ -1.46
SCAF4-205ENST00000472318 DYNC2H1Q8NCM8 4307 aaKnown RBP5.95□□□□□ -1.46
SCAF4-205ENST00000472318 MPDZO75970 2070 aa5.94□□□□□ -1.46
SCAF4-205ENST00000472318 PINLYPA6NC86 204 aa5.94□□□□□ -1.46
SCAF4-205ENST00000472318 METTL21EPA6NDL7 271 aa5.94□□□□□ -1.46
SCAF4-205ENST00000472318 CXorf65A6NEN9 183 aa5.94□□□□□ -1.46
SCAF4-205ENST00000472318 BCKDKO14874 412 aa5.94□□□□□ -1.46
SCAF4-205ENST00000472318 LSM1O15116 133 aaKnown RBP5.94□□□□□ -1.46
SCAF4-205ENST00000472318 RGS11O94810 467 aa5.94□□□□□ -1.46
SCAF4-205ENST00000472318 ECDO95905 644 aaPredicted RBP5.94□□□□□ -1.46
SCAF4-205ENST00000472318 HOXB6P17509 224 aaKnown RBP5.94□□□□□ -1.46
SCAF4-205ENST00000472318 PDHA2P29803 388 aa5.94□□□□□ -1.46
SCAF4-205ENST00000472318 SLC6A8P48029 635 aa5.94□□□□□ -1.46
SCAF4-205ENST00000472318 MMP15P51511 669 aa5.94□□□□□ -1.46
SCAF4-205ENST00000472318 CDH6P55285 790 aa5.94□□□□□ -1.46
SCAF4-205ENST00000472318 ATP5J2P56134 94 aa5.94□□□□□ -1.46
SCAF4-205ENST00000472318 SLC3A1Q07837 685 aa5.94□□□□□ -1.46
SCAF4-205ENST00000472318 MAD2L1Q13257 205 aaPredicted RBP5.94□□□□□ -1.46
SCAF4-205ENST00000472318 NPTX1Q15818 432 aa5.94□□□□□ -1.46
SCAF4-205ENST00000472318 USF2Q15853 346 aaPredicted RBP5.94□□□□□ -1.46
SCAF4-205ENST00000472318 MIDNQ504T8 468 aa5.94□□□□□ -1.46
SCAF4-205ENST00000472318 PPP6R3Q5H9R7 873 aaPredicted RBP5.94□□□□□ -1.46
SCAF4-205ENST00000472318 WASHC2DQ5SRD0 308 aa5.94□□□□□ -1.46
SCAF4-205ENST00000472318 PRMT9Q6P2P2 845 aa5.94□□□□□ -1.46
SCAF4-205ENST00000472318 TTC23LQ6PF05 361 aa5.94□□□□□ -1.46
SCAF4-205ENST00000472318 CPEB2Q7Z5Q1 589 aaKnown RBP5.94□□□□□ -1.46
SCAF4-205ENST00000472318 TMPRSS11BQ86T26 416 aa5.94□□□□□ -1.46
SCAF4-205ENST00000472318 LINC00523Q86TU6 105 aa5.94□□□□□ -1.46
SCAF4-205ENST00000472318 CCDC25Q86WR0 208 aa5.94□□□□□ -1.46
SCAF4-205ENST00000472318 CROCCP3Q8IVE0 287 aa5.94□□□□□ -1.46
SCAF4-205ENST00000472318 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.94□□□□□ -1.46
SCAF4-205ENST00000472318 MICU2Q8IYU8 434 aa5.94□□□□□ -1.46
SCAF4-205ENST00000472318 LIX1Q8N485 282 aa5.94□□□□□ -1.46
SCAF4-205ENST00000472318 ATPAF2Q8N5M1 289 aa5.94□□□□□ -1.46
SCAF4-205ENST00000472318 NANOGP1Q8N7R0 232 aa5.94□□□□□ -1.46
SCAF4-205ENST00000472318 ZNF565Q8N9K5 539 aa5.94□□□□□ -1.46
SCAF4-205ENST00000472318 DDHD1Q8NEL9 900 aa5.94□□□□□ -1.46
SCAF4-205ENST00000472318 OR4C5Q8NGB2 326 aa5.94□□□□□ -1.46
SCAF4-205ENST00000472318 OR13F1Q8NGS4 319 aa5.94□□□□□ -1.46
SCAF4-205ENST00000472318 LRRC20Q8TCA0 184 aa5.94□□□□□ -1.46
SCAF4-205ENST00000472318 UBTD2Q8WUN7 234 aa5.94□□□□□ -1.46
SCAF4-205ENST00000472318 MCHR2Q969V1 340 aa5.94□□□□□ -1.46
SCAF4-205ENST00000472318 ZMYND19Q96E35 227 aaPredicted RBP5.94□□□□□ -1.46
SCAF4-205ENST00000472318 COQ2Q96H96 371 aa5.94□□□□□ -1.46
SCAF4-205ENST00000472318 C10orf90Q96M02 699 aa5.94□□□□□ -1.46
SCAF4-205ENST00000472318 TSSK2Q96PF2 358 aa5.94□□□□□ -1.46
SCAF4-205ENST00000472318 TRIB3Q96RU7 358 aa5.94□□□□□ -1.46
SCAF4-205ENST00000472318 GFI1Q99684 422 aa5.94□□□□□ -1.46
SCAF4-205ENST00000472318 SNRNP25Q9BV90 132 aaKnown RBP5.94□□□□□ -1.46
SCAF4-205ENST00000472318 OR52A5Q9H2C5 316 aa5.94□□□□□ -1.46
SCAF4-205ENST00000472318 RHBGQ9H310 441 aa5.94□□□□□ -1.46
SCAF4-205ENST00000472318 TRIM45Q9H8W5 580 aaPredicted RBP5.94□□□□□ -1.46
SCAF4-205ENST00000472318 PIGLQ9Y2B2 252 aa5.94□□□□□ -1.46
SCAF4-205ENST00000472318 PHF3Q92576 2039 aaKnown RBP5.94□□□□□ -1.46
SCAF4-205ENST00000472318 TRAV24A0A0B4J272 114 aa5.93□□□□□ -1.46
SCAF4-205ENST00000472318 A0A1W2PPK0 400 aa5.93□□□□□ -1.46
SCAF4-205ENST00000472318 FAM166BA8MTA8 275 aa5.93□□□□□ -1.46
SCAF4-205ENST00000472318 VGLL3A8MV65 326 aa5.93□□□□□ -1.46
SCAF4-205ENST00000472318 DEFB108AA8MXU0 73 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms