RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 FOXO1Q12778 655 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 SRSF6Q13247 344 aaKnown RBP8.43□□□□□ -1.06
VPS52-216ENST00000471309 DOC2BQ14184 412 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 PON3Q15166 354 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 CTF1Q16619 201 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 RSPO4Q2I0M5 234 aaPredicted RBP8.43□□□□□ -1.06
VPS52-216ENST00000471309 ARMCX4Q5H9R4 360 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 AGAP7PQ5VUJ5 663 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 PAQR6Q6TCH4 344 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 LINC00696Q6ZRV3 163 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 PXKQ7Z7A4 578 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 ERI1Q8IV48 349 aaKnown RBP8.43□□□□□ -1.06
VPS52-216ENST00000471309 KLHL36Q8N4N3 616 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 ACBD7Q8N6N7 88 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 ZNF485Q8NCK3 441 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 OR2T4Q8NH00 348 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 OR52N1Q8NH53 320 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 KCNE4Q8WWG9 221 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 C5orf34Q96MH7 638 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 AGAP4Q96P64 663 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 SIGLEC12Q96PQ1 595 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 OR5B2Q96R09 309 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 CNN2Q99439 309 aaKnown RBP8.43□□□□□ -1.06
VPS52-216ENST00000471309 ZNF649Q9BS31 505 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 TMEM185BQ9H7F4 350 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 ZNF703Q9H7S9 590 aaPredicted RBP8.43□□□□□ -1.06
VPS52-216ENST00000471309 ISYNA1Q9NPH2 558 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 RPRD1BQ9NQG5 326 aaKnown RBP8.43□□□□□ -1.06
VPS52-216ENST00000471309 VSX1Q9NZR4 365 aaPredicted RBP8.43□□□□□ -1.06
VPS52-216ENST00000471309 ZNF346Q9UL40 294 aaKnown RBP8.43□□□□□ -1.06
VPS52-216ENST00000471309 MOKQ9UQ07 419 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 POLHQ9Y253 713 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 RPH3AQ9Y2J0 694 aaPredicted RBP8.43□□□□□ -1.06
VPS52-216ENST00000471309 RIF1Q5UIP0 2472 aaKnown RBP8.43□□□□□ -1.06
VPS52-216ENST00000471309 EML6Q6ZMW3 1958 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 LOC102725191A0A1B0GVB3 256 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 PRSS37A4D1T9 235 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 TRABD2BA6NFA1 517 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 NPIPA5E9PKD4 350 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 MS4A18H0YCH9 400 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 LINC01387J3KSC0 135 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 CCRL2O00421 344 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 XKRYO14609 159 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 SLC22A1O15245 554 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 ARHGEF9O43307 516 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 DNPH1O43598 174 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 AKR7A3O95154 331 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 ATE1O95260 518 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 F10P00742 488 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 HSMCR30P0CW71 290 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 PRKAR1AP10644 381 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 WT1P19544 449 aaPredicted RBP8.42□□□□□ -1.06
VPS52-216ENST00000471309 AHCYP23526 432 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 PCSK6P29122 969 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 SFTPDP35247 375 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 ACVR1BP36896 505 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 CAPZA2P47755 286 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 CENPAP49450 140 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 P2RY4P51582 365 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 RAC1P63000 192 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 HSF1Q00613 529 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 POU3F1Q03052 451 aaPredicted RBP8.42□□□□□ -1.06
VPS52-216ENST00000471309 ACSM1Q08AH1 577 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 C19orf57Q0VDD7 668 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 TSTQ16762 297 aaKnown RBP8.42□□□□□ -1.06
VPS52-216ENST00000471309 MS4A18Q3C1V0 323 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 TMEM176BQ3YBM2 270 aaPredicted RBP8.42□□□□□ -1.06
VPS52-216ENST00000471309 TIMM50Q3ZCQ8 353 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 LINC01590Q5TEZ4 76 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 EEF1A1P5Q5VTE0 462 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 C19orf48Q6RUI8 117 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 B3GLCTQ6Y288 498 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 TMPPEQ6ZT21 453 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 TMEM99Q8N816 258 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 ZNF248Q8NDW4 579 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 OR10H4Q8NGA5 316 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 OR14L1PQ8NHC6 308 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 ASB10Q8WXI3 467 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 SMPDL3BQ92485 455 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 KLHL15Q96M94 604 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 TSC22D3Q99576 134 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 ASB6Q9NWX5 421 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 NDUFB11Q9NX14 153 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 B3GAT1Q9P2W7 334 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 NPIPA1Q9UND3 350 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 KLF13Q9Y2Y9 288 aaPredicted RBP8.42□□□□□ -1.06
VPS52-216ENST00000471309 CAB39Q9Y376 341 aaPredicted RBP8.42□□□□□ -1.06
VPS52-216ENST00000471309 PCDHGB7Q9Y5F8 929 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 NOX1Q9Y5S8 564 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 FKBP7Q9Y680 259 aa8.42□□□□□ -1.06
VPS52-216ENST00000471309 EP300Q09472 2414 aaPredicted RBP8.41□□□□□ -1.06
VPS52-216ENST00000471309 DOCK10Q96BY6 2186 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 A0A1W2PNR3 127 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 A0A1W2PPW3 197 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 DAPL1A0PJW8 107 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 AQP7P3A6NL99 342 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 H7C1C5 153 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 SULT2B1O00204 365 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 AKAP8O43823 692 aaKnown RBP8.41□□□□□ -1.06
VPS52-216ENST00000471309 AHCYL1O43865 530 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms