RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 SH3BGRP55822 239 aaPredicted RBP12.38□□□□□ -0.43
TOP3B-215ENST00000470338 ROR2Q01974 943 aaKnown RBP12.38□□□□□ -0.43
TOP3B-215ENST00000470338 ST3GAL3Q11203 375 aa12.38□□□□□ -0.43
TOP3B-215ENST00000470338 FXNQ16595 210 aa12.38□□□□□ -0.43
TOP3B-215ENST00000470338 TBRG1Q3YBR2 411 aa12.38□□□□□ -0.43
TOP3B-215ENST00000470338 HIKESHIQ53FT3 197 aa12.38□□□□□ -0.43
TOP3B-215ENST00000470338 IFI44LQ53G44 452 aa12.38□□□□□ -0.43
TOP3B-215ENST00000470338 PHYHD1Q5SRE7 291 aa12.38□□□□□ -0.43
TOP3B-215ENST00000470338 HMBOX1Q6NT76 420 aa12.38□□□□□ -0.43
TOP3B-215ENST00000470338 ANKRD16Q6P6B7 361 aa12.38□□□□□ -0.43
TOP3B-215ENST00000470338 TMEM108Q6UXF1 575 aa12.38□□□□□ -0.43
TOP3B-215ENST00000470338 WDFY1Q8IWB7 410 aa12.38□□□□□ -0.43
TOP3B-215ENST00000470338 C20orf196Q8IYI0 205 aa12.38□□□□□ -0.43
TOP3B-215ENST00000470338 LRRC75A-AS1Q8N1F1 130 aa12.38□□□□□ -0.43
TOP3B-215ENST00000470338 GPR137CQ8N3F9 429 aa12.38□□□□□ -0.43
TOP3B-215ENST00000470338 KBTBD8Q8NFY9 601 aa12.38□□□□□ -0.43
TOP3B-215ENST00000470338 GEMIN6Q8WXD5 167 aaKnown RBP12.38□□□□□ -0.43
TOP3B-215ENST00000470338 NEUROG1Q92886 237 aa12.38□□□□□ -0.43
TOP3B-215ENST00000470338 RADILQ96JH8 1075 aa12.38□□□□□ -0.43
TOP3B-215ENST00000470338 EMC6Q9BV81 110 aa12.38□□□□□ -0.43
TOP3B-215ENST00000470338 NELFAQ9H3P2 528 aa12.38□□□□□ -0.43
TOP3B-215ENST00000470338 OBP2BQ9NPH6 170 aa12.38□□□□□ -0.43
TOP3B-215ENST00000470338 MED29Q9NX70 200 aa12.38□□□□□ -0.43
TOP3B-215ENST00000470338 ADA2Q9NZK5 511 aa12.38□□□□□ -0.43
TOP3B-215ENST00000470338 MGAT4BQ9UQ53 548 aa12.38□□□□□ -0.43
TOP3B-215ENST00000470338 MAGED1Q9Y5V3 778 aaPredicted RBP12.38□□□□□ -0.43
TOP3B-215ENST00000470338 USF3Q68DE3 2245 aa12.38□□□□□ -0.43
TOP3B-215ENST00000470338 ARPC4-TTLL3A0A0A6YYG9 625 aa12.37□□□□□ -0.43
TOP3B-215ENST00000470338 HTR3EA5X5Y0 456 aa12.37□□□□□ -0.43
TOP3B-215ENST00000470338 C11orf98E9PRG8 122 aa12.37□□□□□ -0.43
TOP3B-215ENST00000470338 ABCD4O14678 606 aa12.37□□□□□ -0.43
TOP3B-215ENST00000470338 FFAR1O14842 300 aa12.37□□□□□ -0.43
TOP3B-215ENST00000470338 OR6A2O95222 327 aa12.37□□□□□ -0.43
TOP3B-215ENST00000470338 FAM107AO95990 144 aa12.37□□□□□ -0.43
TOP3B-215ENST00000470338 WNT11O96014 354 aa12.37□□□□□ -0.43
TOP3B-215ENST00000470338 HIST1H2ABP04908 130 aa12.37□□□□□ -0.43
TOP3B-215ENST00000470338 TSPAN19P0C672 248 aa12.37□□□□□ -0.43
TOP3B-215ENST00000470338 DANCRP0C864 163 aa12.37□□□□□ -0.43
TOP3B-215ENST00000470338 HSD17B1P14061 328 aa12.37□□□□□ -0.43
TOP3B-215ENST00000470338 PAX1P15863 534 aa12.37□□□□□ -0.43
TOP3B-215ENST00000470338 FUT1P19526 365 aa12.37□□□□□ -0.43
TOP3B-215ENST00000470338 PAX7P23759 505 aa12.37□□□□□ -0.43
TOP3B-215ENST00000470338 CD40P25942 277 aa12.37□□□□□ -0.43
TOP3B-215ENST00000470338 IFNA8P32881 189 aa12.37□□□□□ -0.43
TOP3B-215ENST00000470338 ADAM8P78325 824 aa12.37□□□□□ -0.43
TOP3B-215ENST00000470338 ARF1P84077 181 aaKnown RBP12.37□□□□□ -0.43
TOP3B-215ENST00000470338 GLYATQ6IB77 296 aa12.37□□□□□ -0.43
TOP3B-215ENST00000470338 SLC35D2Q76EJ3 337 aa12.37□□□□□ -0.43
TOP3B-215ENST00000470338 HIST3H2AQ7L7L0 130 aa12.37□□□□□ -0.43
TOP3B-215ENST00000470338 TSEN54Q7Z6J9 526 aaKnown RBP12.37□□□□□ -0.43
TOP3B-215ENST00000470338 TGIF2LYQ8IUE0 185 aa12.37□□□□□ -0.43
TOP3B-215ENST00000470338 OFCC1Q8IZS5 231 aa12.37□□□□□ -0.43
TOP3B-215ENST00000470338 PGAM4Q8N0Y7 254 aa12.37□□□□□ -0.43
TOP3B-215ENST00000470338 FITM2Q8N6M3 262 aa12.37□□□□□ -0.43
TOP3B-215ENST00000470338 PFN4Q8NHR9 129 aa12.37□□□□□ -0.43
TOP3B-215ENST00000470338 HIST1H2ACQ93077 130 aa12.37□□□□□ -0.43
TOP3B-215ENST00000470338 FBXW5Q969U6 566 aa12.37□□□□□ -0.43
TOP3B-215ENST00000470338 FAM162AQ96A26 154 aa12.37□□□□□ -0.43
TOP3B-215ENST00000470338 ZNF837Q96EG3 531 aaPredicted RBP12.37□□□□□ -0.43
TOP3B-215ENST00000470338 HSH2DQ96JZ2 352 aa12.37□□□□□ -0.43
TOP3B-215ENST00000470338 ADAD1Q96M93 576 aaKnown RBP12.37□□□□□ -0.43
TOP3B-215ENST00000470338 C1QTNF6Q9BXI9 259 aa12.37□□□□□ -0.43
TOP3B-215ENST00000470338 CRLF2Q9HC73 371 aa12.37□□□□□ -0.43
TOP3B-215ENST00000470338 MAN2C1Q9NTJ4 1040 aa12.37□□□□□ -0.43
TOP3B-215ENST00000470338 C20orf141Q9NUB4 165 aa12.37□□□□□ -0.43
TOP3B-215ENST00000470338 DCAF13Q9NV06 445 aaKnown RBP12.37□□□□□ -0.43
TOP3B-215ENST00000470338 CD300AQ9UGN4 299 aa12.37□□□□□ -0.43
TOP3B-215ENST00000470338 EGFL7Q9UHF1 273 aa12.37□□□□□ -0.43
TOP3B-215ENST00000470338 RPS6KA6Q9UK32 745 aa12.37□□□□□ -0.43
TOP3B-215ENST00000470338 MED31Q9Y3C7 131 aa12.37□□□□□ -0.43
TOP3B-215ENST00000470338 FLNAP21333 2647 aaKnown RBP12.36□□□□□ -0.43
TOP3B-215ENST00000470338 ACANP16112 2415 aa12.36□□□□□ -0.43
TOP3B-215ENST00000470338 ZNF726A6NNF4 738 aa12.36□□□□□ -0.43
TOP3B-215ENST00000470338 J3KTA2 159 aa12.36□□□□□ -0.43
TOP3B-215ENST00000470338 M0R1B8 84 aa12.36□□□□□ -0.43
TOP3B-215ENST00000470338 RNF13O43567 381 aa12.36□□□□□ -0.43
TOP3B-215ENST00000470338 SMPD2O60906 423 aa12.36□□□□□ -0.43
TOP3B-215ENST00000470338 OR7A10O76100 309 aa12.36□□□□□ -0.43
TOP3B-215ENST00000470338 PRSS23O95084 383 aa12.36□□□□□ -0.43
TOP3B-215ENST00000470338 UMPSP11172 480 aa12.36□□□□□ -0.43
TOP3B-215ENST00000470338 IFNGR1P15260 489 aa12.36□□□□□ -0.43
TOP3B-215ENST00000470338 FUT4P22083 530 aa12.36□□□□□ -0.43
TOP3B-215ENST00000470338 YAP1P46937 504 aaKnown RBP12.36□□□□□ -0.43
TOP3B-215ENST00000470338 NKX6-1P78426 367 aaPredicted RBP12.36□□□□□ -0.43
TOP3B-215ENST00000470338 CAMK2DQ13557 499 aa12.36□□□□□ -0.43
TOP3B-215ENST00000470338 KRT72Q14CN4 511 aa12.36□□□□□ -0.43
TOP3B-215ENST00000470338 CEACAM16Q2WEN9 425 aa12.36□□□□□ -0.43
TOP3B-215ENST00000470338 GKAP1Q5VSY0 366 aaPredicted RBP12.36□□□□□ -0.43
TOP3B-215ENST00000470338 CARD17Q5XLA6 110 aa12.36□□□□□ -0.43
TOP3B-215ENST00000470338 KLHL24Q6TFL4 600 aa12.36□□□□□ -0.43
TOP3B-215ENST00000470338 FKBP9P1Q75LS8 142 aa12.36□□□□□ -0.43
TOP3B-215ENST00000470338 NANOGNBQ7Z5D8 188 aa12.36□□□□□ -0.43
TOP3B-215ENST00000470338 KRTAP1-3Q8IUG1 177 aa12.36□□□□□ -0.43
TOP3B-215ENST00000470338 RNF148Q8N7C7 305 aa12.36□□□□□ -0.43
TOP3B-215ENST00000470338 OR6X1Q8NH79 312 aa12.36□□□□□ -0.43
TOP3B-215ENST00000470338 SMAP2Q8WU79 429 aaPredicted RBP12.36□□□□□ -0.43
TOP3B-215ENST00000470338 SGTBQ96EQ0 304 aa12.36□□□□□ -0.43
TOP3B-215ENST00000470338 TMUB1Q9BVT8 246 aa12.36□□□□□ -0.43
TOP3B-215ENST00000470338 FNDC11Q9BVV2 318 aa12.36□□□□□ -0.43
TOP3B-215ENST00000470338 GORASP2Q9H8Y8 452 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms