RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 C20orf196Q8IYI0 205 aa13.26□□□□□ -0.29
ATG4B-215ENST00000468018 LRRC17Q8N6Y2 441 aa13.26□□□□□ -0.29
ATG4B-215ENST00000468018 ANKS4BQ8N8V4 417 aa13.26□□□□□ -0.29
ATG4B-215ENST00000468018 PIK3C3Q8NEB9 887 aa13.26□□□□□ -0.29
ATG4B-215ENST00000468018 WFDC11Q8NEX6 87 aa13.26□□□□□ -0.29
ATG4B-215ENST00000468018 TMEM255BQ8WV15 326 aa13.26□□□□□ -0.29
ATG4B-215ENST00000468018 BCL2L2Q92843 193 aaPredicted RBP13.26□□□□□ -0.29
ATG4B-215ENST00000468018 TXNDC15Q96J42 360 aa13.26□□□□□ -0.29
ATG4B-215ENST00000468018 RADILQ96JH8 1075 aa13.26□□□□□ -0.29
ATG4B-215ENST00000468018 GRIP2Q9C0E4 1043 aa13.26□□□□□ -0.29
ATG4B-215ENST00000468018 GPR35Q9HC97 309 aa13.26□□□□□ -0.29
ATG4B-215ENST00000468018 SPAG4Q9NPE6 437 aa13.26□□□□□ -0.29
ATG4B-215ENST00000468018 NANSQ9NR45 359 aa13.26□□□□□ -0.29
ATG4B-215ENST00000468018 C20orf141Q9NUB4 165 aa13.26□□□□□ -0.29
ATG4B-215ENST00000468018 MED29Q9NX70 200 aa13.26□□□□□ -0.29
ATG4B-215ENST00000468018 ARL2BPQ9Y2Y0 163 aa13.26□□□□□ -0.29
ATG4B-215ENST00000468018 MAGED1Q9Y5V3 778 aaPredicted RBP13.26□□□□□ -0.29
ATG4B-215ENST00000468018 SLC35F4A4IF30 521 aa13.25□□□□□ -0.29
ATG4B-215ENST00000468018 CLOCKO15516 846 aa13.25□□□□□ -0.29
ATG4B-215ENST00000468018 SMPD2O60906 423 aa13.25□□□□□ -0.29
ATG4B-215ENST00000468018 PRSS23O95084 383 aa13.25□□□□□ -0.29
ATG4B-215ENST00000468018 ADORA3P0DMS8 318 aa13.25□□□□□ -0.29
ATG4B-215ENST00000468018 ZNF83P51522 516 aa13.25□□□□□ -0.29
ATG4B-215ENST00000468018 PRPS1P60891 318 aa13.25□□□□□ -0.29
ATG4B-215ENST00000468018 NKX6-1P78426 367 aaPredicted RBP13.25□□□□□ -0.29
ATG4B-215ENST00000468018 ROR2Q01974 943 aaKnown RBP13.25□□□□□ -0.29
ATG4B-215ENST00000468018 SPOCK1Q08629 439 aa13.25□□□□□ -0.29
ATG4B-215ENST00000468018 FOXD4Q12950 439 aaPredicted RBP13.25□□□□□ -0.29
ATG4B-215ENST00000468018 KLHL17Q6TDP4 642 aa13.25□□□□□ -0.29
ATG4B-215ENST00000468018 TSEN54Q7Z6J9 526 aaKnown RBP13.25□□□□□ -0.29
ATG4B-215ENST00000468018 DTX2Q86UW9 622 aa13.25□□□□□ -0.29
ATG4B-215ENST00000468018 OFCC1Q8IZS5 231 aa13.25□□□□□ -0.29
ATG4B-215ENST00000468018 PFN4Q8NHR9 129 aa13.25□□□□□ -0.29
ATG4B-215ENST00000468018 TMEM239Q8WW34 195 aa13.25□□□□□ -0.29
ATG4B-215ENST00000468018 LZICQ8WZA0 190 aa13.25□□□□□ -0.29
ATG4B-215ENST00000468018 ZNF837Q96EG3 531 aaPredicted RBP13.25□□□□□ -0.29
ATG4B-215ENST00000468018 TPD52L3Q96J77 140 aa13.25□□□□□ -0.29
ATG4B-215ENST00000468018 HS6ST2Q96MM7 605 aa13.25□□□□□ -0.29
ATG4B-215ENST00000468018 MAN2C1Q9NTJ4 1040 aa13.25□□□□□ -0.29
ATG4B-215ENST00000468018 FAM53CQ9NYF3 392 aa13.25□□□□□ -0.29
ATG4B-215ENST00000468018 SNX13Q9Y5W8 968 aa13.25□□□□□ -0.29
ATG4B-215ENST00000468018 CHD3Q12873 2000 aaKnown RBP13.25□□□□□ -0.29
ATG4B-215ENST00000468018 ZNF99A8MXY4 864 aaPredicted RBP13.24□□□□□ -0.29
ATG4B-215ENST00000468018 KPNA4O00629 521 aaPredicted RBP13.24□□□□□ -0.29
ATG4B-215ENST00000468018 FFAR1O14842 300 aa13.24□□□□□ -0.29
ATG4B-215ENST00000468018 KRT33AO76009 404 aa13.24□□□□□ -0.29
ATG4B-215ENST00000468018 WNT11O96014 354 aa13.24□□□□□ -0.29
ATG4B-215ENST00000468018 IGLV1-44P01699 117 aa13.24□□□□□ -0.29
ATG4B-215ENST00000468018 CD8AP01732 235 aa13.24□□□□□ -0.29
ATG4B-215ENST00000468018 PTH2RP49190 550 aa13.24□□□□□ -0.29
ATG4B-215ENST00000468018 ST3GAL3Q11203 375 aa13.24□□□□□ -0.29
ATG4B-215ENST00000468018 C3orf36Q3SXR2 165 aa13.24□□□□□ -0.29
ATG4B-215ENST00000468018 HMBOX1Q6NT76 420 aa13.24□□□□□ -0.29
ATG4B-215ENST00000468018 ANKRD16Q6P6B7 361 aa13.24□□□□□ -0.29
ATG4B-215ENST00000468018 B3GLCTQ6Y288 498 aa13.24□□□□□ -0.29
ATG4B-215ENST00000468018 C10orf53Q8N6V4 93 aa13.24□□□□□ -0.29
ATG4B-215ENST00000468018 FAM169BQ8N8A8 192 aa13.24□□□□□ -0.29
ATG4B-215ENST00000468018 GEMIN6Q8WXD5 167 aaKnown RBP13.24□□□□□ -0.29
ATG4B-215ENST00000468018 KCTD14Q9BQ13 255 aaPredicted RBP13.24□□□□□ -0.29
ATG4B-215ENST00000468018 EMC6Q9BV81 110 aa13.24□□□□□ -0.29
ATG4B-215ENST00000468018 CRLF2Q9HC73 371 aa13.24□□□□□ -0.29
ATG4B-215ENST00000468018 CISD1Q9NZ45 108 aaKnown RBP13.24□□□□□ -0.29
ATG4B-215ENST00000468018 MAP1AP78559 2803 aaPredicted RBP13.24□□□□□ -0.29
ATG4B-215ENST00000468018 E7EQL1 145 aa13.23□□□□□ -0.29
ATG4B-215ENST00000468018 SERPINA1P01009 418 aa13.23□□□□□ -0.29
ATG4B-215ENST00000468018 IGKV3-15P01624 115 aa13.23□□□□□ -0.29
ATG4B-215ENST00000468018 HSD17B1P14061 328 aa13.23□□□□□ -0.29
ATG4B-215ENST00000468018 IFNGR1P15260 489 aa13.23□□□□□ -0.29
ATG4B-215ENST00000468018 AHCYP23526 432 aa13.23□□□□□ -0.29
ATG4B-215ENST00000468018 CDH11P55287 796 aa13.23□□□□□ -0.29
ATG4B-215ENST00000468018 ARF1P84077 181 aaKnown RBP13.23□□□□□ -0.29
ATG4B-215ENST00000468018 CEACAM16Q2WEN9 425 aa13.23□□□□□ -0.29
ATG4B-215ENST00000468018 IFI44LQ53G44 452 aa13.23□□□□□ -0.29
ATG4B-215ENST00000468018 PGAM4Q8N0Y7 254 aa13.23□□□□□ -0.29
ATG4B-215ENST00000468018 GPR137CQ8N3F9 429 aa13.23□□□□□ -0.29
ATG4B-215ENST00000468018 OR6X1Q8NH79 312 aa13.23□□□□□ -0.29
ATG4B-215ENST00000468018 SMAP2Q8WU79 429 aaPredicted RBP13.23□□□□□ -0.29
ATG4B-215ENST00000468018 TMEM171Q8WVE6 324 aa13.23□□□□□ -0.29
ATG4B-215ENST00000468018 TMEM54Q969K7 222 aa13.23□□□□□ -0.29
ATG4B-215ENST00000468018 HSH2DQ96JZ2 352 aa13.23□□□□□ -0.29
ATG4B-215ENST00000468018 ADAD1Q96M93 576 aaKnown RBP13.23□□□□□ -0.29
ATG4B-215ENST00000468018 LRRC37BQ96QE4 947 aa13.23□□□□□ -0.29
ATG4B-215ENST00000468018 SEPHS2Q99611 448 aa13.23□□□□□ -0.29
ATG4B-215ENST00000468018 TRAF4Q9BUZ4 470 aaPredicted RBP13.23□□□□□ -0.29
ATG4B-215ENST00000468018 CXorf56Q9H5V9 222 aa13.23□□□□□ -0.29
ATG4B-215ENST00000468018 ARL8BQ9NVJ2 186 aa13.23□□□□□ -0.29
ATG4B-215ENST00000468018 CD300AQ9UGN4 299 aa13.23□□□□□ -0.29
ATG4B-215ENST00000468018 TAGLN3Q9UI15 199 aa13.23□□□□□ -0.29
ATG4B-215ENST00000468018 LAMP3Q9UQV4 416 aa13.23□□□□□ -0.29
ATG4B-215ENST00000468018 A0A096LPE4 126 aa13.22□□□□□ -0.29
ATG4B-215ENST00000468018 IGHV1-18A0A0C4DH31 117 aa13.22□□□□□ -0.29
ATG4B-215ENST00000468018 A0A1W2PPZ6 126 aa13.22□□□□□ -0.29
ATG4B-215ENST00000468018 HTR3EA5X5Y0 456 aa13.22□□□□□ -0.29
ATG4B-215ENST00000468018 ZNF503-AS2A6NEH8 195 aa13.22□□□□□ -0.29
ATG4B-215ENST00000468018 C11orf98E9PRG8 122 aa13.22□□□□□ -0.29
ATG4B-215ENST00000468018 J3KTA2 159 aa13.22□□□□□ -0.29
ATG4B-215ENST00000468018 M0R1B8 84 aa13.22□□□□□ -0.29
ATG4B-215ENST00000468018 DCTN3O75935 186 aa13.22□□□□□ -0.29
ATG4B-215ENST00000468018 OR7A10O76100 309 aa13.22□□□□□ -0.29
ATG4B-215ENST00000468018 IFNW1P05000 195 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms