RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 PRKCDQ05655 676 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 FAM69AQ5T7M9 428 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 UBE2UQ5VVX9 321 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 FAM180AQ6UWF9 173 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 UBQLNLQ8IYU4 475 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 LINC00471Q8N535 108 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 SLC25A43Q8WUT9 341 aaPredicted RBP6.17□□□□□ -1.42
SCAF4-204ENST00000467731 OR5B2Q96R09 309 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 PTDSS2Q9BVG9 487 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 GABARAPL1Q9H0R8 117 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 Q9H521 79 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 EXO5Q9H790 373 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 KRCC1Q9NPI7 259 aaPredicted RBP6.17□□□□□ -1.42
SCAF4-204ENST00000467731 DAPK2Q9UIK4 370 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 NPIPA1Q9UND3 350 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 TRAV36DV7A0A075B6V5 113 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 ZNHIT1O43257 154 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 SEC14L5O43304 696 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 GATCO43716 136 aaKnown RBP6.16□□□□□ -1.42
SCAF4-204ENST00000467731 AHSA1O95433 338 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 IGHG3P01860 377 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 CRYABP02511 175 aaKnown RBP6.16□□□□□ -1.42
SCAF4-204ENST00000467731 SAGP10523 405 aaPredicted RBP6.16□□□□□ -1.42
SCAF4-204ENST00000467731 ANXA8P13928 327 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 BMP7P18075 431 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 POU3F2P20265 443 aaPredicted RBP6.16□□□□□ -1.42
SCAF4-204ENST00000467731 IFNGR2P38484 337 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 NR4A2P43354 598 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 LHX2P50458 406 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 ALDH3A2P51648 485 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 SUCLG1P53597 346 aaKnown RBP6.16□□□□□ -1.42
SCAF4-204ENST00000467731 CSNK2BP67870 215 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 HSF1Q00613 529 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 KLRB1Q12918 225 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 MYBPHQ13203 477 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 ITGADQ13349 1161 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 DAG1Q14118 895 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 ZNF74Q16587 644 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 KDM4DQ6B0I6 523 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 FAHD1Q6P587 224 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 C5orf46Q6UWT4 87 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 SLC46A3Q7Z3Q1 461 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 GGNQ86UU5 652 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 CISD2Q8N5K1 135 aaKnown RBP6.16□□□□□ -1.42
SCAF4-204ENST00000467731 LRRC17Q8N6Y2 441 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 SNX18Q96RF0 628 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 RBM4BQ9BQ04 359 aaKnown RBP6.16□□□□□ -1.42
SCAF4-204ENST00000467731 RBM4Q9BWF3 364 aaKnown RBP6.16□□□□□ -1.42
SCAF4-204ENST00000467731 SPRR3Q9UBC9 169 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 TMEFF2Q9UIK5 374 aaPredicted RBP6.16□□□□□ -1.42
SCAF4-204ENST00000467731 MGAT4BQ9UQ53 548 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 SHANK1Q9Y566 2161 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 EIF1AYO14602 144 aaKnown RBP6.16□□□□□ -1.42
SCAF4-204ENST00000467731 TNFSF11O14788 317 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 KLF4O43474 513 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 SERPINI2O75830 405 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 SNAPINO95295 136 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 ADAP00813 363 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 IGF2P01344 180 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 FKBP2P26885 142 aaKnown RBP6.16□□□□□ -1.42
SCAF4-204ENST00000467731 DIO1P49895 249 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 CLDN15P56746 228 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 IL1RL1Q01638 556 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 LTBQ06643 244 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 CTU2Q2VPK5 515 aaKnown RBP6.16□□□□□ -1.42
SCAF4-204ENST00000467731 PRR30Q53SZ7 412 aaPredicted RBP6.16□□□□□ -1.42
SCAF4-204ENST00000467731 EEF1A1P5Q5VTE0 462 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 VASNQ6EMK4 673 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 TMPRSS11FQ6ZWK6 438 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 GALNT5Q7Z7M9 940 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 MED12LQ86YW9 2145 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 CDK20Q8IZL9 346 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 C10orf53Q8N6V4 93 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 TBC1D15Q8TC07 691 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 SLC25A36Q96CQ1 311 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 SNRNP40Q96DI7 357 aaKnown RBP6.16□□□□□ -1.42
SCAF4-204ENST00000467731 SGTBQ96EQ0 304 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 KLHL15Q96M94 604 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 DGCR6LQ9BY27 220 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 ZNF556Q9HAH1 456 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 NANSQ9NR45 359 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 PLSCR2Q9NRY7 297 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 KRT84Q9NSB2 600 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 SEC14L4Q9UDX3 406 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 AP4B1Q9Y6B7 739 aa6.16□□□□□ -1.42
SCAF4-204ENST00000467731 KMT2BQ9UMN6 2715 aaPredicted RBP6.16□□□□□ -1.42
SCAF4-204ENST00000467731 TRAV27A0A087WT01 109 aa6.15□□□□□ -1.42
SCAF4-204ENST00000467731 A0A0J9YW62 118 aa6.15□□□□□ -1.42
SCAF4-204ENST00000467731 FTCDNL1E5RQL4 147 aa6.15□□□□□ -1.42
SCAF4-204ENST00000467731 SULT2B1O00204 365 aa6.15□□□□□ -1.42
SCAF4-204ENST00000467731 OR2T1O43869 369 aa6.15□□□□□ -1.42
SCAF4-204ENST00000467731 HCN1O60741 890 aa6.15□□□□□ -1.42
SCAF4-204ENST00000467731 MITFO75030 526 aaPredicted RBP6.15□□□□□ -1.42
SCAF4-204ENST00000467731 SNAP29O95721 258 aa6.15□□□□□ -1.42
SCAF4-204ENST00000467731 BGLAPP02818 100 aa6.15□□□□□ -1.42
SCAF4-204ENST00000467731 RPS2P15880 293 aaKnown RBP6.15□□□□□ -1.42
SCAF4-204ENST00000467731 IGFBP5P24593 272 aa6.15□□□□□ -1.42
SCAF4-204ENST00000467731 FPR3P25089 353 aa6.15□□□□□ -1.42
SCAF4-204ENST00000467731 IDUAP35475 653 aa6.15□□□□□ -1.42
SCAF4-204ENST00000467731 BMXP51813 675 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms