RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 UMPSP11172 480 aa9.73□□□□□ -0.85
MSH5-212ENST00000467319 EPXP11678 715 aa9.73□□□□□ -0.85
MSH5-212ENST00000467319 ZNF26P17031 533 aaPredicted RBP9.73□□□□□ -0.85
MSH5-212ENST00000467319 HOXB6P17509 224 aaKnown RBP9.73□□□□□ -0.85
MSH5-212ENST00000467319 FUT1P19526 365 aa9.73□□□□□ -0.85
MSH5-212ENST00000467319 SSTR2P30874 369 aa9.73□□□□□ -0.85
MSH5-212ENST00000467319 RRM2P31350 389 aa9.73□□□□□ -0.85
MSH5-212ENST00000467319 AQP2P41181 271 aa9.73□□□□□ -0.85
MSH5-212ENST00000467319 GPR4P46093 362 aa9.73□□□□□ -0.85
MSH5-212ENST00000467319 OMPP47874 163 aa9.73□□□□□ -0.85
MSH5-212ENST00000467319 SLC9A3P48764 834 aa9.73□□□□□ -0.85
MSH5-212ENST00000467319 HMGA2P52926 109 aa9.73□□□□□ -0.85
MSH5-212ENST00000467319 SMIM11AP58511 58 aa9.73□□□□□ -0.85
MSH5-212ENST00000467319 CBX1P83916 185 aa9.73□□□□□ -0.85
MSH5-212ENST00000467319 LGALS3BPQ08380 585 aa9.73□□□□□ -0.85
MSH5-212ENST00000467319 C1DQ13901 141 aaKnown RBP9.73□□□□□ -0.85
MSH5-212ENST00000467319 TSC22D1Q15714 1073 aa9.73□□□□□ -0.85
MSH5-212ENST00000467319 ANKDD1AQ495B1 522 aa9.73□□□□□ -0.85
MSH5-212ENST00000467319 FAM98BQ52LJ0 330 aaKnown RBP9.73□□□□□ -0.85
MSH5-212ENST00000467319 NIPAL3Q6P499 406 aa9.73□□□□□ -0.85
MSH5-212ENST00000467319 TBPL2Q6SJ96 375 aa9.73□□□□□ -0.85
MSH5-212ENST00000467319 MEX3DQ86XN8 651 aaKnown RBP9.73□□□□□ -0.85
MSH5-212ENST00000467319 LRRC75AQ8NAA5 344 aa9.73□□□□□ -0.85
MSH5-212ENST00000467319 C1orf162Q8NEQ5 155 aaPredicted RBP9.73□□□□□ -0.85
MSH5-212ENST00000467319 OR13C2Q8NGS9 318 aa9.73□□□□□ -0.85
MSH5-212ENST00000467319 MOSPD2Q8NHP6 518 aa9.73□□□□□ -0.85
MSH5-212ENST00000467319 LINC01560Q8TB33 94 aa9.73□□□□□ -0.85
MSH5-212ENST00000467319 UTP4Q969X6 686 aaKnown RBP9.73□□□□□ -0.85
MSH5-212ENST00000467319 S100PBPQ96BU1 408 aa9.73□□□□□ -0.85
MSH5-212ENST00000467319 LRGUKQ96M69 825 aa9.73□□□□□ -0.85
MSH5-212ENST00000467319 WFIKKN1Q96NZ8 548 aa9.73□□□□□ -0.85
MSH5-212ENST00000467319 USB1Q9BQ65 265 aaKnown RBP9.73□□□□□ -0.85
MSH5-212ENST00000467319 HDHD5Q9BXW7 423 aa9.73□□□□□ -0.85
MSH5-212ENST00000467319 VNN3Q9NY84 501 aa9.73□□□□□ -0.85
MSH5-212ENST00000467319 TAS2R16Q9NYV7 291 aa9.73□□□□□ -0.85
MSH5-212ENST00000467319 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.73□□□□□ -0.85
MSH5-212ENST00000467319 PDZD2O15018 2839 aa9.73□□□□□ -0.85
MSH5-212ENST00000467319 NAV2Q8IVL1 2488 aa9.73□□□□□ -0.85
MSH5-212ENST00000467319 A6NNC1 897 aa9.72□□□□□ -0.85
MSH5-212ENST00000467319 DEFB108AA8MXU0 73 aa9.72□□□□□ -0.85
MSH5-212ENST00000467319 EFCAB9A8MZ26 197 aa9.72□□□□□ -0.85
MSH5-212ENST00000467319 C11orf98E9PRG8 122 aa9.72□□□□□ -0.85
MSH5-212ENST00000467319 RPL36A-HNRNPH2H7BZ11 118 aa9.72□□□□□ -0.85
MSH5-212ENST00000467319 SLC43A1O75387 559 aa9.72□□□□□ -0.85
MSH5-212ENST00000467319 UPK3AO75631 287 aa9.72□□□□□ -0.85
MSH5-212ENST00000467319 CTAG2O75638 210 aa9.72□□□□□ -0.85
MSH5-212ENST00000467319 GADD45GO95257 159 aa9.72□□□□□ -0.85
MSH5-212ENST00000467319 STAMBPO95630 424 aa9.72□□□□□ -0.85
MSH5-212ENST00000467319 IFNGR1P15260 489 aa9.72□□□□□ -0.85
MSH5-212ENST00000467319 CRYGSP22914 178 aa9.72□□□□□ -0.85
MSH5-212ENST00000467319 IL32P24001 234 aa9.72□□□□□ -0.85
MSH5-212ENST00000467319 LOXP28300 417 aaPredicted RBP9.72□□□□□ -0.85
MSH5-212ENST00000467319 MPGP29372 298 aa9.72□□□□□ -0.85
MSH5-212ENST00000467319 CHRNB3Q05901 458 aa9.72□□□□□ -0.85
MSH5-212ENST00000467319 FAPQ12884 760 aa9.72□□□□□ -0.85
MSH5-212ENST00000467319 FOXD4Q12950 439 aaPredicted RBP9.72□□□□□ -0.85
MSH5-212ENST00000467319 ZNF770Q6IQ21 691 aaPredicted RBP9.72□□□□□ -0.85
MSH5-212ENST00000467319 CCDC121Q6ZUS5 278 aa9.72□□□□□ -0.85
MSH5-212ENST00000467319 BHLHA15Q7RTS1 189 aaPredicted RBP9.72□□□□□ -0.85
MSH5-212ENST00000467319 C20orf196Q8IYI0 205 aa9.72□□□□□ -0.85
MSH5-212ENST00000467319 UBE2J2Q8N2K1 259 aa9.72□□□□□ -0.85
MSH5-212ENST00000467319 C17orf78Q8N4C9 275 aa9.72□□□□□ -0.85
MSH5-212ENST00000467319 PAPD5Q8NDF8 572 aaKnown RBP9.72□□□□□ -0.85
MSH5-212ENST00000467319 OR6X1Q8NH79 312 aa9.72□□□□□ -0.85
MSH5-212ENST00000467319 CANT1Q8WVQ1 401 aa9.72□□□□□ -0.85
MSH5-212ENST00000467319 FAM46AQ96IP4 442 aaKnown RBP9.72□□□□□ -0.85
MSH5-212ENST00000467319 TXNDC15Q96J42 360 aa9.72□□□□□ -0.85
MSH5-212ENST00000467319 LRR1Q96L50 414 aa9.72□□□□□ -0.85
MSH5-212ENST00000467319 GPA33Q99795 319 aa9.72□□□□□ -0.85
MSH5-212ENST00000467319 MED18Q9BUE0 208 aa9.72□□□□□ -0.85
MSH5-212ENST00000467319 MCCC2Q9HCC0 563 aa9.72□□□□□ -0.85
MSH5-212ENST00000467319 NDRG3Q9UGV2 375 aa9.72□□□□□ -0.85
MSH5-212ENST00000467319 ABCA4P78363 2273 aa9.72□□□□□ -0.85
MSH5-212ENST00000467319 TRAV27A0A087WT01 109 aa9.71□□□□□ -0.86
MSH5-212ENST00000467319 SLC35F4A4IF30 521 aa9.71□□□□□ -0.86
MSH5-212ENST00000467319 OR5H1A6NKK0 313 aa9.71□□□□□ -0.86
MSH5-212ENST00000467319 ZNF587BE7ETH6 402 aa9.71□□□□□ -0.86
MSH5-212ENST00000467319 BLOC1S5-TXNDC5H3BN57 136 aa9.71□□□□□ -0.86
MSH5-212ENST00000467319 EBAG9O00559 213 aa9.71□□□□□ -0.86
MSH5-212ENST00000467319 CLOCKO15516 846 aa9.71□□□□□ -0.86
MSH5-212ENST00000467319 RNF13O43567 381 aa9.71□□□□□ -0.86
MSH5-212ENST00000467319 SERPINI2O75830 405 aa9.71□□□□□ -0.86
MSH5-212ENST00000467319 KRT36O76013 467 aa9.71□□□□□ -0.86
MSH5-212ENST00000467319 OR6A2O95222 327 aa9.71□□□□□ -0.86
MSH5-212ENST00000467319 HRGP04196 525 aa9.71□□□□□ -0.86
MSH5-212ENST00000467319 HIST1H2ABP04908 130 aa9.71□□□□□ -0.86
MSH5-212ENST00000467319 PGA4P0DJD7 388 aa9.71□□□□□ -0.86
MSH5-212ENST00000467319 PGA3P0DJD8 388 aa9.71□□□□□ -0.86
MSH5-212ENST00000467319 SAGP10523 405 aaPredicted RBP9.71□□□□□ -0.86
MSH5-212ENST00000467319 AHCYP23526 432 aa9.71□□□□□ -0.86
MSH5-212ENST00000467319 FPR3P25089 353 aa9.71□□□□□ -0.86
MSH5-212ENST00000467319 DNAJA1P31689 397 aaKnown RBP9.71□□□□□ -0.86
MSH5-212ENST00000467319 DAP3P51398 398 aaKnown RBP9.71□□□□□ -0.86
MSH5-212ENST00000467319 SH3BGRP55822 239 aaPredicted RBP9.71□□□□□ -0.86
MSH5-212ENST00000467319 BIDP55957 195 aa9.71□□□□□ -0.86
MSH5-212ENST00000467319 FXYD6P3P58550 94 aa9.71□□□□□ -0.86
MSH5-212ENST00000467319 IL1RL1Q01638 556 aa9.71□□□□□ -0.86
MSH5-212ENST00000467319 TLE4Q04727 773 aa9.71□□□□□ -0.86
MSH5-212ENST00000467319 GK3PQ14409 553 aa9.71□□□□□ -0.86
MSH5-212ENST00000467319 TAB1Q15750 504 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms