RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 AQP2P41181 271 aa12.79□□□□□ -0.36
SQSTM1-205ENST00000464493 CHRNB3Q05901 458 aa12.79□□□□□ -0.36
SQSTM1-205ENST00000464493 RPL18Q07020 188 aaKnown RBP12.79□□□□□ -0.36
SQSTM1-205ENST00000464493 ABHD12BQ7Z5M8 362 aaPredicted RBP12.79□□□□□ -0.36
SQSTM1-205ENST00000464493 MEX3DQ86XN8 651 aaKnown RBP12.79□□□□□ -0.36
SQSTM1-205ENST00000464493 AQP12AQ8IXF9 295 aa12.79□□□□□ -0.36
SQSTM1-205ENST00000464493 HSD17B8Q92506 261 aa12.79□□□□□ -0.36
SQSTM1-205ENST00000464493 ZC3HAV1LQ96H79 300 aaKnown RBP12.79□□□□□ -0.36
SQSTM1-205ENST00000464493 OR2M2Q96R28 347 aa12.79□□□□□ -0.36
SQSTM1-205ENST00000464493 EMC6Q9BV81 110 aa12.79□□□□□ -0.36
SQSTM1-205ENST00000464493 LINC00470Q9BZP3 86 aa12.79□□□□□ -0.36
SQSTM1-205ENST00000464493 MED29Q9NX70 200 aa12.79□□□□□ -0.36
SQSTM1-205ENST00000464493 TAS2R16Q9NYV7 291 aa12.79□□□□□ -0.36
SQSTM1-205ENST00000464493 FBN2P35556 2912 aa12.78□□□□□ -0.36
SQSTM1-205ENST00000464493 FAM221AA4D161 298 aa12.78□□□□□ -0.36
SQSTM1-205ENST00000464493 SLC35F4A4IF30 521 aa12.78□□□□□ -0.36
SQSTM1-205ENST00000464493 EFCAB9A8MZ26 197 aa12.78□□□□□ -0.36
SQSTM1-205ENST00000464493 ZNF587BE7ETH6 402 aa12.78□□□□□ -0.36
SQSTM1-205ENST00000464493 UPK3AO75631 287 aa12.78□□□□□ -0.36
SQSTM1-205ENST00000464493 CTAG2O75638 210 aa12.78□□□□□ -0.36
SQSTM1-205ENST00000464493 KRT36O76013 467 aa12.78□□□□□ -0.36
SQSTM1-205ENST00000464493 THBDP07204 575 aa12.78□□□□□ -0.36
SQSTM1-205ENST00000464493 ITGA5P08648 1049 aa12.78□□□□□ -0.36
SQSTM1-205ENST00000464493 RAP2AP10114 183 aa12.78□□□□□ -0.36
SQSTM1-205ENST00000464493 IFNGR1P15260 489 aa12.78□□□□□ -0.36
SQSTM1-205ENST00000464493 RRM2P31350 389 aa12.78□□□□□ -0.36
SQSTM1-205ENST00000464493 MAGEA2P43356 314 aa12.78□□□□□ -0.36
SQSTM1-205ENST00000464493 FOXG1P55316 489 aaPredicted RBP12.78□□□□□ -0.36
SQSTM1-205ENST00000464493 TGFBR3Q03167 851 aa12.78□□□□□ -0.36
SQSTM1-205ENST00000464493 LGALS3BPQ08380 585 aa12.78□□□□□ -0.36
SQSTM1-205ENST00000464493 FLOT2Q14254 428 aa12.78□□□□□ -0.36
SQSTM1-205ENST00000464493 LAPTM4AQ15012 233 aa12.78□□□□□ -0.36
SQSTM1-205ENST00000464493 SEC23BQ15437 767 aa12.78□□□□□ -0.36
SQSTM1-205ENST00000464493 C9orf135Q5VTT2 229 aa12.78□□□□□ -0.36
SQSTM1-205ENST00000464493 TMPRSS11FQ6ZWK6 438 aa12.78□□□□□ -0.36
SQSTM1-205ENST00000464493 SLC35D2Q76EJ3 337 aa12.78□□□□□ -0.36
SQSTM1-205ENST00000464493 OAFQ86UD1 273 aa12.78□□□□□ -0.36
SQSTM1-205ENST00000464493 TMEM123Q8N131 208 aa12.78□□□□□ -0.36
SQSTM1-205ENST00000464493 ALPK1Q96QP1 1244 aa12.78□□□□□ -0.36
SQSTM1-205ENST00000464493 FUZQ9BT04 418 aa12.78□□□□□ -0.36
SQSTM1-205ENST00000464493 LRMDAQ9H2I8 198 aa12.78□□□□□ -0.36
SQSTM1-205ENST00000464493 MMADHCQ9H3L0 296 aaPredicted RBP12.78□□□□□ -0.36
SQSTM1-205ENST00000464493 SLC7A8Q9UHI5 535 aa12.78□□□□□ -0.36
SQSTM1-205ENST00000464493 POMPQ9Y244 141 aa12.78□□□□□ -0.36
SQSTM1-205ENST00000464493 TMEM5Q9Y2B1 443 aa12.78□□□□□ -0.36
SQSTM1-205ENST00000464493 HIF3AQ9Y2N7 669 aa12.78□□□□□ -0.36
SQSTM1-205ENST00000464493 A0A1W2PRG6 482 aa12.77□□□□□ -0.37
SQSTM1-205ENST00000464493 SH3PXD2BA1X283 911 aa12.77□□□□□ -0.37
SQSTM1-205ENST00000464493 CYSRT1A8MQ03 144 aa12.77□□□□□ -0.37
SQSTM1-205ENST00000464493 EBAG9O00559 213 aa12.77□□□□□ -0.37
SQSTM1-205ENST00000464493 RAD51DO75771 328 aa12.77□□□□□ -0.37
SQSTM1-205ENST00000464493 GOSR1O95249 250 aa12.77□□□□□ -0.37
SQSTM1-205ENST00000464493 F13BP05160 661 aa12.77□□□□□ -0.37
SQSTM1-205ENST00000464493 CRYGSP22914 178 aa12.77□□□□□ -0.37
SQSTM1-205ENST00000464493 GPR4P46093 362 aa12.77□□□□□ -0.37
SQSTM1-205ENST00000464493 OMPP47874 163 aa12.77□□□□□ -0.37
SQSTM1-205ENST00000464493 SLC9A3P48764 834 aa12.77□□□□□ -0.37
SQSTM1-205ENST00000464493 BIDP55957 195 aa12.77□□□□□ -0.37
SQSTM1-205ENST00000464493 CAMK2DQ13557 499 aa12.77□□□□□ -0.37
SQSTM1-205ENST00000464493 TAB1Q15750 504 aa12.77□□□□□ -0.37
SQSTM1-205ENST00000464493 STK11Q15831 433 aa12.77□□□□□ -0.37
SQSTM1-205ENST00000464493 GABRA6Q16445 453 aa12.77□□□□□ -0.37
SQSTM1-205ENST00000464493 ANKDD1AQ495B1 522 aa12.77□□□□□ -0.37
SQSTM1-205ENST00000464493 TIMM23BQ5SRD1 257 aa12.77□□□□□ -0.37
SQSTM1-205ENST00000464493 CARD17Q5XLA6 110 aa12.77□□□□□ -0.37
SQSTM1-205ENST00000464493 OR7E24Q6IFN5 339 aa12.77□□□□□ -0.37
SQSTM1-205ENST00000464493 CCDC121Q6ZUS5 278 aa12.77□□□□□ -0.37
SQSTM1-205ENST00000464493 P2RY8Q86VZ1 359 aa12.77□□□□□ -0.37
SQSTM1-205ENST00000464493 GPR137CQ8N3F9 429 aa12.77□□□□□ -0.37
SQSTM1-205ENST00000464493 OR4K5Q8NGD3 323 aa12.77□□□□□ -0.37
SQSTM1-205ENST00000464493 OR51A7Q8NH64 312 aa12.77□□□□□ -0.37
SQSTM1-205ENST00000464493 OR6X1Q8NH79 312 aa12.77□□□□□ -0.37
SQSTM1-205ENST00000464493 MOSPD2Q8NHP6 518 aa12.77□□□□□ -0.37
SQSTM1-205ENST00000464493 FAM46AQ96IP4 442 aaKnown RBP12.77□□□□□ -0.37
SQSTM1-205ENST00000464493 LRR1Q96L50 414 aa12.77□□□□□ -0.37
SQSTM1-205ENST00000464493 ADAD1Q96M93 576 aaKnown RBP12.77□□□□□ -0.37
SQSTM1-205ENST00000464493 MUS81Q96NY9 551 aa12.77□□□□□ -0.37
SQSTM1-205ENST00000464493 ALKBH3Q96Q83 286 aaPredicted RBP12.77□□□□□ -0.37
SQSTM1-205ENST00000464493 TNFRSF13CQ96RJ3 184 aa12.77□□□□□ -0.37
SQSTM1-205ENST00000464493 KRCC1Q9NPI7 259 aaPredicted RBP12.77□□□□□ -0.37
SQSTM1-205ENST00000464493 INIPQ9NRY2 104 aa12.77□□□□□ -0.37
SQSTM1-205ENST00000464493 RASSF1Q9NS23 344 aa12.77□□□□□ -0.37
SQSTM1-205ENST00000464493 TMCC3Q9ULS5 477 aa12.77□□□□□ -0.37
SQSTM1-205ENST00000464493 NOTCH2Q04721 2471 aa12.76□□□□□ -0.37
SQSTM1-205ENST00000464493 TRAV27A0A087WT01 109 aa12.76□□□□□ -0.37
SQSTM1-205ENST00000464493 DHRS12A0PJE2 317 aa12.76□□□□□ -0.37
SQSTM1-205ENST00000464493 OR5H1A6NKK0 313 aa12.76□□□□□ -0.37
SQSTM1-205ENST00000464493 RPL36A-HNRNPH2H7BZ11 118 aa12.76□□□□□ -0.37
SQSTM1-205ENST00000464493 CDC42EP2O14613 210 aa12.76□□□□□ -0.37
SQSTM1-205ENST00000464493 CLOCKO15516 846 aa12.76□□□□□ -0.37
SQSTM1-205ENST00000464493 BCL10O95999 233 aa12.76□□□□□ -0.37
SQSTM1-205ENST00000464493 CDH2P19022 906 aaPredicted RBP12.76□□□□□ -0.37
SQSTM1-205ENST00000464493 HMGA2P52926 109 aa12.76□□□□□ -0.37
SQSTM1-205ENST00000464493 RPS4XP62701 263 aaKnown RBP12.76□□□□□ -0.37
SQSTM1-205ENST00000464493 ROR2Q01974 943 aaKnown RBP12.76□□□□□ -0.37
SQSTM1-205ENST00000464493 FHL1Q13642 323 aa12.76□□□□□ -0.37
SQSTM1-205ENST00000464493 ALG10Q5BKT4 473 aa12.76□□□□□ -0.37
SQSTM1-205ENST00000464493 FBXW10Q5XX13 1052 aa12.76□□□□□ -0.37
SQSTM1-205ENST00000464493 ALKBH2Q6NS38 261 aa12.76□□□□□ -0.37
SQSTM1-205ENST00000464493 HMBOX1Q6NT76 420 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms