RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 HPRP00739 348 aa15.01□□□□□ -0.01
VPS52-215ENST00000464425 MT-ATP6P00846 226 aa15.01□□□□□ -0.01
VPS52-215ENST00000464425 COX5AP20674 150 aa15.01□□□□□ -0.01
VPS52-215ENST00000464425 FUT4P22083 530 aa15.01□□□□□ -0.01
VPS52-215ENST00000464425 RRM2P31350 389 aa15.01□□□□□ -0.01
VPS52-215ENST00000464425 SELENOPP49908 381 aa15.01□□□□□ -0.01
VPS52-215ENST00000464425 CLDN17P56750 224 aa15.01□□□□□ -0.01
VPS52-215ENST00000464425 LGALS3BPQ08380 585 aa15.01□□□□□ -0.01
VPS52-215ENST00000464425 GK3PQ14409 553 aa15.01□□□□□ -0.01
VPS52-215ENST00000464425 KPNB1Q14974 876 aaKnown RBP15.01□□□□□ -0.01
VPS52-215ENST00000464425 TAB1Q15750 504 aa15.01□□□□□ -0.01
VPS52-215ENST00000464425 MS4A18Q3C1V0 323 aa15.01□□□□□ -0.01
VPS52-215ENST00000464425 OR2T5Q6IEZ7 315 aa15.01□□□□□ -0.01
VPS52-215ENST00000464425 NIPAL3Q6P499 406 aa15.01□□□□□ -0.01
VPS52-215ENST00000464425 OR2T29Q8NH02 315 aa15.01□□□□□ -0.01
VPS52-215ENST00000464425 HSD17B8Q92506 261 aa15.01□□□□□ -0.01
VPS52-215ENST00000464425 DENND2DQ9H6A0 471 aaPredicted RBP15.01□□□□□ -0.01
VPS52-215ENST00000464425 MEPEQ9NQ76 525 aaPredicted RBP15.01□□□□□ -0.01
VPS52-215ENST00000464425 MALT1Q9UDY8 824 aa15.01□□□□□ -0.01
VPS52-215ENST00000464425 ITGB1BP2Q9UKP3 347 aa15.01□□□□□ -0.01
VPS52-215ENST00000464425 CORINQ9Y5Q5 1042 aa15.01□□□□□ -0.01
VPS52-215ENST00000464425 KRT33AO76009 404 aa15□□□□□ -0.01
VPS52-215ENST00000464425 HLA-DOBP13765 273 aa15□□□□□ -0.01
VPS52-215ENST00000464425 AHCYP23526 432 aa15□□□□□ -0.01
VPS52-215ENST00000464425 LIMS1P48059 325 aa15□□□□□ -0.01
VPS52-215ENST00000464425 ERFP50548 548 aa15□□□□□ -0.01
VPS52-215ENST00000464425 UGT2B15P54855 530 aa15□□□□□ -0.01
VPS52-215ENST00000464425 SPIBQ01892 262 aa15□□□□□ -0.01
VPS52-215ENST00000464425 PRKCDQ05655 676 aa15□□□□□ -0.01
VPS52-215ENST00000464425 ZNF74Q16587 644 aa15□□□□□ -0.01
VPS52-215ENST00000464425 PODNL1Q6PEZ8 512 aa15□□□□□ -0.01
VPS52-215ENST00000464425 MBOAT2Q6ZWT7 520 aa15□□□□□ -0.01
VPS52-215ENST00000464425 UEVLDQ8IX04 471 aa15□□□□□ -0.01
VPS52-215ENST00000464425 LRRC17Q8N6Y2 441 aa15□□□□□ -0.01
VPS52-215ENST00000464425 SCAIQ8N9R8 606 aa15□□□□□ -0.01
VPS52-215ENST00000464425 LIPHQ8WWY8 451 aa15□□□□□ -0.01
VPS52-215ENST00000464425 HS3ST6Q96QI5 342 aa15□□□□□ -0.01
VPS52-215ENST00000464425 SLCO5A1Q9H2Y9 848 aa15□□□□□ -0.01
VPS52-215ENST00000464425 MRPL39Q9NYK5 338 aaKnown RBP15□□□□□ -0.01
VPS52-215ENST00000464425 TAS2R16Q9NYV7 291 aa15□□□□□ -0.01
VPS52-215ENST00000464425 AP4S1Q9Y587 144 aa15□□□□□ -0.01
VPS52-215ENST00000464425 TRBV4-1A0A0J9YWV2 114 aa14.99□□□□□ -0.01
VPS52-215ENST00000464425 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.99□□□□□ -0.01
VPS52-215ENST00000464425 SH3PXD2BA1X283 911 aa14.99□□□□□ -0.01
VPS52-215ENST00000464425 ERICH4A6NGS2 130 aa14.99□□□□□ -0.01
VPS52-215ENST00000464425 PLPP3O14495 311 aa14.99□□□□□ -0.01
VPS52-215ENST00000464425 SERPINI2O75830 405 aa14.99□□□□□ -0.01
VPS52-215ENST00000464425 CST1P01037 141 aa14.99□□□□□ -0.01
VPS52-215ENST00000464425 ITGA5P08648 1049 aa14.99□□□□□ -0.01
VPS52-215ENST00000464425 CDH2P19022 906 aaPredicted RBP14.99□□□□□ -0.01
VPS52-215ENST00000464425 BEX5Q5H9J7 111 aa14.99□□□□□ -0.01
VPS52-215ENST00000464425 ZNF730Q6ZMV8 503 aa14.99□□□□□ -0.01
VPS52-215ENST00000464425 RRM2BQ7LG56 351 aa14.99□□□□□ -0.01
VPS52-215ENST00000464425 LINC00471Q8N535 108 aa14.99□□□□□ -0.01
VPS52-215ENST00000464425 POMGNT2Q8NAT1 580 aa14.99□□□□□ -0.01
VPS52-215ENST00000464425 ADPRHL1Q8NDY3 354 aa14.99□□□□□ -0.01
VPS52-215ENST00000464425 OR5J2Q8NH18 312 aa14.99□□□□□ -0.01
VPS52-215ENST00000464425 OR52J3Q8NH60 311 aa14.99□□□□□ -0.01
VPS52-215ENST00000464425 PFN4Q8NHR9 129 aa14.99□□□□□ -0.01
VPS52-215ENST00000464425 PLPPR2Q96GM1 343 aa14.99□□□□□ -0.01
VPS52-215ENST00000464425 ALPK1Q96QP1 1244 aa14.99□□□□□ -0.01
VPS52-215ENST00000464425 PLEKHF2Q9H8W4 249 aa14.99□□□□□ -0.01
VPS52-215ENST00000464425 FKRPQ9H9S5 495 aa14.99□□□□□ -0.01
VPS52-215ENST00000464425 NANSQ9NR45 359 aa14.99□□□□□ -0.01
VPS52-215ENST00000464425 DNAJB9Q9UBS3 223 aa14.99□□□□□ -0.01
VPS52-215ENST00000464425 ZNF229Q9UJW7 825 aa14.99□□□□□ -0.01
VPS52-215ENST00000464425 LYVE1Q9Y5Y7 322 aa14.99□□□□□ -0.01
VPS52-215ENST00000464425 CCDC168Q8NDH2 2452 aa14.99□□□□□ -0.01
VPS52-215ENST00000464425 ALPK2Q86TB3 2170 aa14.98□□□□□ -0.01
VPS52-215ENST00000464425 HRNRQ86YZ3 2850 aaPredicted RBP14.98□□□□□ -0.01
VPS52-215ENST00000464425 LOC102725191A0A1B0GVB3 256 aa14.98□□□□□ -0.01
VPS52-215ENST00000464425 A0A1W2PR80 420 aa14.98□□□□□ -0.01
VPS52-215ENST00000464425 ENO4A6NNW6 628 aa14.98□□□□□ -0.01
VPS52-215ENST00000464425 C11orf98E9PRG8 122 aa14.98□□□□□ -0.01
VPS52-215ENST00000464425 PDLIM1O00151 329 aa14.98□□□□□ -0.01
VPS52-215ENST00000464425 TNFRSF11BO00300 401 aa14.98□□□□□ -0.01
VPS52-215ENST00000464425 UPK3AO75631 287 aa14.98□□□□□ -0.01
VPS52-215ENST00000464425 OR6A2O95222 327 aa14.98□□□□□ -0.01
VPS52-215ENST00000464425 ADORA3P0DMS8 318 aa14.98□□□□□ -0.01
VPS52-215ENST00000464425 LOXP28300 417 aaPredicted RBP14.98□□□□□ -0.01
VPS52-215ENST00000464425 POU3F1Q03052 451 aaPredicted RBP14.98□□□□□ -0.01
VPS52-215ENST00000464425 PUDPQ08623 228 aa14.98□□□□□ -0.01
VPS52-215ENST00000464425 FGD3Q5JSP0 725 aa14.98□□□□□ -0.01
VPS52-215ENST00000464425 ZFP1Q6P2D0 407 aa14.98□□□□□ -0.01
VPS52-215ENST00000464425 TBPL2Q6SJ96 375 aa14.98□□□□□ -0.01
VPS52-215ENST00000464425 NRMQ8IXM6 262 aa14.98□□□□□ -0.01
VPS52-215ENST00000464425 CDK20Q8IZL9 346 aa14.98□□□□□ -0.01
VPS52-215ENST00000464425 OR4C15Q8NGM1 316 aa14.98□□□□□ -0.01
VPS52-215ENST00000464425 OR52N5Q8NH56 324 aa14.98□□□□□ -0.01
VPS52-215ENST00000464425 BPIFA2Q96DR5 249 aa14.98□□□□□ -0.01
VPS52-215ENST00000464425 MUCL1Q96DR8 90 aa14.98□□□□□ -0.01
VPS52-215ENST00000464425 SGTBQ96EQ0 304 aa14.98□□□□□ -0.01
VPS52-215ENST00000464425 TXNDC15Q96J42 360 aa14.98□□□□□ -0.01
VPS52-215ENST00000464425 USB1Q9BQ65 265 aaKnown RBP14.98□□□□□ -0.01
VPS52-215ENST00000464425 REEP1Q9H902 201 aa14.98□□□□□ -0.01
VPS52-215ENST00000464425 KRCC1Q9NPI7 259 aaPredicted RBP14.98□□□□□ -0.01
VPS52-215ENST00000464425 C20orf141Q9NUB4 165 aa14.98□□□□□ -0.01
VPS52-215ENST00000464425 TMCC3Q9ULS5 477 aa14.98□□□□□ -0.01
VPS52-215ENST00000464425 PLEKHA6Q9Y2H5 1048 aa14.98□□□□□ -0.01
VPS52-215ENST00000464425 OR5H1A6NKK0 313 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms