RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 NET1Q7Z628 596 aaPredicted RBP19.49■□□□□ 0.71
USP4-208ENST00000464168 COMTD1Q86VU5 262 aa19.49■□□□□ 0.71
USP4-208ENST00000464168 C20orf196Q8IYI0 205 aa19.49■□□□□ 0.71
USP4-208ENST00000464168 OR9I1Q8NGQ6 314 aa19.49■□□□□ 0.71
USP4-208ENST00000464168 GTF2H4Q92759 462 aa19.49■□□□□ 0.71
USP4-208ENST00000464168 SLC38A4Q969I6 547 aa19.49■□□□□ 0.71
USP4-208ENST00000464168 MS4A3Q96HJ5 214 aa19.49■□□□□ 0.71
USP4-208ENST00000464168 ZNF75AQ96N20 296 aa19.49■□□□□ 0.71
USP4-208ENST00000464168 MRPL37Q9BZE1 423 aaKnown RBP19.49■□□□□ 0.71
USP4-208ENST00000464168 PAIP1Q9H074 479 aaKnown RBP19.49■□□□□ 0.71
USP4-208ENST00000464168 KLHL14Q9P2G3 628 aa19.49■□□□□ 0.71
USP4-208ENST00000464168 TRAV36DV7A0A075B6V5 113 aa19.48■□□□□ 0.71
USP4-208ENST00000464168 SLCO1B7G3V0H7 640 aa19.48■□□□□ 0.71
USP4-208ENST00000464168 ZNF35P13682 527 aa19.48■□□□□ 0.71
USP4-208ENST00000464168 HLA-DOBP13765 273 aa19.48■□□□□ 0.71
USP4-208ENST00000464168 DVL1P1P54792 670 aaPredicted RBP19.48■□□□□ 0.71
USP4-208ENST00000464168 CARD17Q5XLA6 110 aa19.48■□□□□ 0.71
USP4-208ENST00000464168 NHLRC1Q6VVB1 395 aa19.48■□□□□ 0.71
USP4-208ENST00000464168 MAVSQ7Z434 540 aa19.48■□□□□ 0.71
USP4-208ENST00000464168 ADPRHL1Q8NDY3 354 aa19.48■□□□□ 0.71
USP4-208ENST00000464168 BBS10Q8TAM1 723 aa19.48■□□□□ 0.71
USP4-208ENST00000464168 MRPL24Q96A35 216 aaKnown RBP19.48■□□□□ 0.71
USP4-208ENST00000464168 REV1Q9UBZ9 1251 aa19.48■□□□□ 0.71
USP4-208ENST00000464168 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.48■□□□□ 0.71
USP4-208ENST00000464168 V9GYY5 206 aaPredicted RBP19.48■□□□□ 0.71
USP4-208ENST00000464168 CLIC1O00299 241 aa19.47■□□□□ 0.71
USP4-208ENST00000464168 SYNGR3O43761 229 aa19.47■□□□□ 0.71
USP4-208ENST00000464168 AKAP8O43823 692 aaKnown RBP19.47■□□□□ 0.71
USP4-208ENST00000464168 CD79AP11912 226 aa19.47■□□□□ 0.71
USP4-208ENST00000464168 ETS2P15036 469 aa19.47■□□□□ 0.71
USP4-208ENST00000464168 ZNF14P17017 642 aaPredicted RBP19.47■□□□□ 0.71
USP4-208ENST00000464168 PRKAR1BP31321 381 aa19.47■□□□□ 0.71
USP4-208ENST00000464168 AQP5P55064 265 aa19.47■□□□□ 0.71
USP4-208ENST00000464168 PIGFQ07326 219 aa19.47■□□□□ 0.71
USP4-208ENST00000464168 ELFN2Q5R3F8 820 aa19.47■□□□□ 0.71
USP4-208ENST00000464168 MEX3DQ86XN8 651 aaKnown RBP19.47■□□□□ 0.71
USP4-208ENST00000464168 WDFY1Q8IWB7 410 aa19.47■□□□□ 0.71
USP4-208ENST00000464168 UEVLDQ8IX04 471 aa19.47■□□□□ 0.71
USP4-208ENST00000464168 DNAJA4Q8WW22 397 aaPredicted RBP19.47■□□□□ 0.71
USP4-208ENST00000464168 SLC41A3Q96GZ6 507 aa19.47■□□□□ 0.71
USP4-208ENST00000464168 LRR1Q96L50 414 aa19.47■□□□□ 0.71
USP4-208ENST00000464168 OR52B2Q96RD2 323 aa19.47■□□□□ 0.71
USP4-208ENST00000464168 EMC6Q9BV81 110 aa19.47■□□□□ 0.71
USP4-208ENST00000464168 B4DSR2 109 aa19.46■□□□□ 0.71
USP4-208ENST00000464168 UBDO15205 165 aa19.46■□□□□ 0.71
USP4-208ENST00000464168 HOXB9P17482 250 aaPredicted RBP19.46■□□□□ 0.71
USP4-208ENST00000464168 FADDQ13158 208 aa19.46■□□□□ 0.71
USP4-208ENST00000464168 GSG1Q2KHT4 349 aa19.46■□□□□ 0.71
USP4-208ENST00000464168 ALG10BQ5I7T1 473 aa19.46■□□□□ 0.71
USP4-208ENST00000464168 SLC2A7Q6PXP3 512 aa19.46■□□□□ 0.71
USP4-208ENST00000464168 ZNF813Q6ZN06 617 aa19.46■□□□□ 0.71
USP4-208ENST00000464168 RINLQ6ZS11 566 aa19.46■□□□□ 0.71
USP4-208ENST00000464168 ZNF627Q7L945 461 aa19.46■□□□□ 0.71
USP4-208ENST00000464168 CARM1Q86X55 608 aa19.46■□□□□ 0.71
USP4-208ENST00000464168 TXNDC15Q96J42 360 aa19.46■□□□□ 0.71
USP4-208ENST00000464168 MS4A5Q9H3V2 200 aa19.46■□□□□ 0.71
USP4-208ENST00000464168 METRNQ9UJH8 293 aa19.46■□□□□ 0.71
USP4-208ENST00000464168 A0A087WUJ7 227 aa19.45■□□□□ 0.7
USP4-208ENST00000464168 M0R233 179 aa19.45■□□□□ 0.7
USP4-208ENST00000464168 TPST1O60507 370 aa19.45■□□□□ 0.7
USP4-208ENST00000464168 HPXP02790 462 aa19.45■□□□□ 0.7
USP4-208ENST00000464168 NQO1P15559 274 aaKnown RBP19.45■□□□□ 0.7
USP4-208ENST00000464168 COL8A2P25067 703 aa19.45■□□□□ 0.7
USP4-208ENST00000464168 GLRXP35754 106 aa19.45■□□□□ 0.7
USP4-208ENST00000464168 MFSD13AQ14CX5 517 aa19.45■□□□□ 0.7
USP4-208ENST00000464168 ULK3Q6PHR2 472 aa19.45■□□□□ 0.7
USP4-208ENST00000464168 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP19.45■□□□□ 0.7
USP4-208ENST00000464168 OR6S1Q8NH40 331 aa19.45■□□□□ 0.7
USP4-208ENST00000464168 PARD6BQ9BYG5 372 aa19.45■□□□□ 0.7
USP4-208ENST00000464168 RACGAP1Q9H0H5 632 aa19.45■□□□□ 0.7
USP4-208ENST00000464168 RAD21L1Q9H4I0 556 aa19.45■□□□□ 0.7
USP4-208ENST00000464168 MED29Q9NX70 200 aa19.45■□□□□ 0.7
USP4-208ENST00000464168 ZNF224Q9NZL3 707 aa19.45■□□□□ 0.7
USP4-208ENST00000464168 SPEF1Q9Y4P9 236 aa19.45■□□□□ 0.7
USP4-208ENST00000464168 CORINQ9Y5Q5 1042 aa19.45■□□□□ 0.7
USP4-208ENST00000464168 TMEM120BA0PK00 339 aa19.44■□□□□ 0.7
USP4-208ENST00000464168 C5orf58C9J3I9 102 aa19.44■□□□□ 0.7
USP4-208ENST00000464168 BGLAPP02818 100 aa19.44■□□□□ 0.7
USP4-208ENST00000464168 TCN1P20061 433 aaPredicted RBP19.44■□□□□ 0.7
USP4-208ENST00000464168 PCMT1P22061 227 aa19.44■□□□□ 0.7
USP4-208ENST00000464168 ALDH3B1P43353 468 aa19.44■□□□□ 0.7
USP4-208ENST00000464168 SEC24CP53992 1094 aa19.44■□□□□ 0.7
USP4-208ENST00000464168 TRMT5Q32P41 509 aaKnown RBP19.44■□□□□ 0.7
USP4-208ENST00000464168 GLIPR1L2Q4G1C9 344 aa19.44■□□□□ 0.7
USP4-208ENST00000464168 FAM91A1Q658Y4 838 aa19.44■□□□□ 0.7
USP4-208ENST00000464168 DHRS4L2Q6PKH6 230 aa19.44■□□□□ 0.7
USP4-208ENST00000464168 LRP11Q86VZ4 500 aa19.44■□□□□ 0.7
USP4-208ENST00000464168 MIER2Q8N344 545 aa19.44■□□□□ 0.7
USP4-208ENST00000464168 SCAIQ8N9R8 606 aa19.44■□□□□ 0.7
USP4-208ENST00000464168 NFKBIDQ8NI38 313 aa19.44■□□□□ 0.7
USP4-208ENST00000464168 MGARPQ8TDB4 240 aa19.44■□□□□ 0.7
USP4-208ENST00000464168 SLC47A1Q96FL8 570 aa19.44■□□□□ 0.7
USP4-208ENST00000464168 SYT3Q9BQG1 590 aa19.44■□□□□ 0.7
USP4-208ENST00000464168 SLC25A37Q9NYZ2 338 aa19.44■□□□□ 0.7
USP4-208ENST00000464168 POFUT2Q9Y2G5 429 aa19.44■□□□□ 0.7
USP4-208ENST00000464168 VENTXO95231 258 aa19.43■□□□□ 0.7
USP4-208ENST00000464168 B4GALT1P15291 398 aa19.43■□□□□ 0.7
USP4-208ENST00000464168 FXNQ16595 210 aa19.43■□□□□ 0.7
USP4-208ENST00000464168 DEF8Q6ZN54 512 aa19.43■□□□□ 0.7
USP4-208ENST00000464168 GLCCI1Q86VQ1 547 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms