RNA–Protein interactions for RNA: ENST00000463375.1

TMEM56-204, Transcript of transmembrane protein 56, humanhuman

TSL 5

Gene TMEM56, Length 349 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-204ENST00000463375 F11RQ9Y624 299 aaKnown RBP-0.54□□□□□ -2.5
TMEM56-204ENST00000463375 DNAH11Q96DT5 4516 aa-0.54□□□□□ -2.5
TMEM56-204ENST00000463375 AHDC1Q5TGY3 1603 aaPredicted RBP-0.54□□□□□ -2.5
TMEM56-204ENST00000463375 REV3LO60673 3130 aa-0.54□□□□□ -2.5
TMEM56-204ENST00000463375 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.54□□□□□ -2.5
TMEM56-204ENST00000463375 TSPOAP1O95153 1857 aa-0.54□□□□□ -2.5
TMEM56-204ENST00000463375 MUC3AQ02505 3323 aa-0.54□□□□□ -2.5
TMEM56-204ENST00000463375 ADAMTS13Q76LX8 1427 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 RBBP6Q7Z6E9 1792 aaKnown RBP-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 CFAP54Q96N23 3096 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 FRYLO94915 3013 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 COL4A6Q14031 1691 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 ZMYM6O95789 1325 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 SH3TC1Q8TE82 1336 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 MKI67P46013 3256 aaKnown RBP-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 A0A0G2JQZ4 141 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 C13orf42A0A1B0GVH6 325 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 A0A1B0GVI7 797 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 TTC26A0AVF1 554 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 ARHGEF37A1IGU5 675 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 ARHGEF35A5YM69 484 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 OOEPA6NGQ2 149 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 OR6C70A6NIJ9 312 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 ZNF716A6NP11 495 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 C19orf84I3L1E1 186 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 BPY2O14599 106 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 TTI1O43156 1089 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 RP2O75695 350 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 HSPA4LO95757 839 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 HLA-DQA1P01909 254 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 GNAO1P09471 354 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 TACSTD2P09758 323 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 ZNF735P0CB33 412 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 DNAJB1P25685 340 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 COPB2P35606 906 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 MAGEA4P43358 317 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 HERVK_113P63132 956 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 ERVK-8P63133 956 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 RUNX1Q01196 453 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 BDH1Q02338 343 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 IFT88Q13099 833 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 CYTH1Q15438 398 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 MAPRE1Q15691 268 aaKnown RBP-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 NSUN5P1Q3KNT7 163 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 AP1ARQ63HQ0 302 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 STUMQ69YW2 141 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 GUSBP11Q6P575 273 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 CBLN3Q6UW01 205 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 CES3Q6UWW8 571 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 Q6ZPB1 254 aaPredicted RBP-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 Q6ZRU5 148 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 H2AFVQ71UI9 128 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 GET4Q7L5D6 327 aaPredicted RBP-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 P4HA3Q7Z4N8 544 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 GRAMD2AQ8IUY3 354 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 LRRC43Q8N309 656 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 ARFGAP2Q8N6H7 521 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 OR56B4Q8NH76 319 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 WDR36Q8NI36 951 aaKnown RBP-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 CIRBP-AS1Q8TBR5 109 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 CANT1Q8WVQ1 401 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 AURKBQ96GD4 344 aaPredicted RBP-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 OBSCN-AS1Q96MR7 158 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 RAB3IPQ96QF0 476 aaPredicted RBP-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 OR5B2Q96R09 309 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 PARK7Q99497 189 aaKnown RBP-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 HSPB9Q9BQS6 159 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 NDUFAF3Q9BU61 184 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 ERVK-6Q9BXR3 956 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 IMUPQ9GZP8 106 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 POLR3FQ9H1D9 316 aaPredicted RBP-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 ZNF385DQ9H6B1 395 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 CYTH4Q9UIA0 394 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 NPIPA1Q9UND3 350 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 CR1P17927 2039 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 COL4A2P08572 1712 aa-0.55□□□□□ -2.5
TMEM56-204ENST00000463375 DMDP11532 3685 aa-0.56□□□□□ -2.5
TMEM56-204ENST00000463375 TANC2Q9HCD6 1990 aa-0.56□□□□□ -2.5
TMEM56-204ENST00000463375 AKAP9Q99996 3911 aa-0.56□□□□□ -2.5
TMEM56-204ENST00000463375 COL4A5P29400 1685 aa-0.56□□□□□ -2.5
TMEM56-204ENST00000463375 CEP290O15078 2479 aa-0.56□□□□□ -2.5
TMEM56-204ENST00000463375 DICER1Q9UPY3 1922 aaKnown RBP-0.56□□□□□ -2.5
TMEM56-204ENST00000463375 PTPRQQ9UMZ3 2332 aa-0.56□□□□□ -2.5
TMEM56-204ENST00000463375 IGKV1-27A0A075B6S5 117 aa-0.56□□□□□ -2.5
TMEM56-204ENST00000463375 IGKV1D-37A0A075B6S9 117 aa-0.56□□□□□ -2.5
TMEM56-204ENST00000463375 IGKV1D-13A0A0B4J2D9 117 aa-0.56□□□□□ -2.5
TMEM56-204ENST00000463375 G3V4G9 280 aa-0.56□□□□□ -2.5
TMEM56-204ENST00000463375 POLR1CO15160 346 aaPredicted RBP-0.56□□□□□ -2.5
TMEM56-204ENST00000463375 NUPL2O15504 423 aaKnown RBP-0.56□□□□□ -2.5
TMEM56-204ENST00000463375 HCRTO43612 131 aa-0.56□□□□□ -2.5
TMEM56-204ENST00000463375 TIMM44O43615 452 aa-0.56□□□□□ -2.5
TMEM56-204ENST00000463375 CCDC22O60826 627 aa-0.56□□□□□ -2.5
TMEM56-204ENST00000463375 GFPT2O94808 682 aa-0.56□□□□□ -2.5
TMEM56-204ENST00000463375 LCA5LO95447 670 aa-0.56□□□□□ -2.5
TMEM56-204ENST00000463375 SYNGR4O95473 234 aa-0.56□□□□□ -2.5
TMEM56-204ENST00000463375 GNA14O95837 355 aa-0.56□□□□□ -2.5
TMEM56-204ENST00000463375 APCSP02743 223 aa-0.56□□□□□ -2.5
TMEM56-204ENST00000463375 ASGR1P07306 291 aa-0.56□□□□□ -2.5
TMEM56-204ENST00000463375 KRT16P08779 473 aa-0.56□□□□□ -2.5
TMEM56-204ENST00000463375 SMIM10L1P0DMW3 83 aa-0.56□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms