RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 HLA-HP01893 362 aa6.53□□□□□ -1.36
SMC3-202ENST00000462899 CHRM4P08173 479 aa6.53□□□□□ -1.36
SMC3-202ENST00000462899 GSTP1P09211 210 aaKnown RBP6.53□□□□□ -1.36
SMC3-202ENST00000462899 LINC00032P0C843 101 aa6.53□□□□□ -1.36
SMC3-202ENST00000462899 RAB6AP20340 208 aa6.53□□□□□ -1.36
SMC3-202ENST00000462899 RPS23P62266 143 aaKnown RBP6.53□□□□□ -1.36
SMC3-202ENST00000462899 MVKQ03426 396 aa6.53□□□□□ -1.36
SMC3-202ENST00000462899 BAMBIQ13145 260 aa6.53□□□□□ -1.36
SMC3-202ENST00000462899 LSM12Q3MHD2 195 aaKnown RBP6.53□□□□□ -1.36
SMC3-202ENST00000462899 SPDYE7PQ495Y7 208 aa6.53□□□□□ -1.36
SMC3-202ENST00000462899 GALNTL6Q49A17 601 aa6.53□□□□□ -1.36
SMC3-202ENST00000462899 PHYHD1Q5SRE7 291 aa6.53□□□□□ -1.36
SMC3-202ENST00000462899 ASPHD2Q6ICH7 369 aa6.53□□□□□ -1.36
SMC3-202ENST00000462899 HMGN2P46Q86SG4 172 aa6.53□□□□□ -1.36
SMC3-202ENST00000462899 WDFY1Q8IWB7 410 aa6.53□□□□□ -1.36
SMC3-202ENST00000462899 CMIPQ8IY22 773 aa6.53□□□□□ -1.36
SMC3-202ENST00000462899 CLEC4FQ8N1N0 589 aa6.53□□□□□ -1.36
SMC3-202ENST00000462899 KRTCAP2Q8N6L1 136 aa6.53□□□□□ -1.36
SMC3-202ENST00000462899 ACMSDQ8TDX5 336 aa6.53□□□□□ -1.36
SMC3-202ENST00000462899 SLC25A28Q96A46 364 aa6.53□□□□□ -1.36
SMC3-202ENST00000462899 TMIGD2Q96BF3 282 aa6.53□□□□□ -1.36
SMC3-202ENST00000462899 ROPN1LQ96C74 230 aa6.53□□□□□ -1.36
SMC3-202ENST00000462899 SLC35G5Q96KT7 338 aa6.53□□□□□ -1.36
SMC3-202ENST00000462899 TSPAN32Q96QS1 320 aa6.53□□□□□ -1.36
SMC3-202ENST00000462899 GPA33Q99795 319 aa6.53□□□□□ -1.36
SMC3-202ENST00000462899 PTDSS2Q9BVG9 487 aa6.53□□□□□ -1.36
SMC3-202ENST00000462899 SLC38A1Q9H2H9 487 aa6.53□□□□□ -1.36
SMC3-202ENST00000462899 PRDM13Q9H4Q3 707 aa6.53□□□□□ -1.36
SMC3-202ENST00000462899 MMP26Q9NRE1 261 aa6.53□□□□□ -1.36
SMC3-202ENST00000462899 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.53□□□□□ -1.36
SMC3-202ENST00000462899 ATAD3AQ9NVI7 634 aa6.53□□□□□ -1.36
SMC3-202ENST00000462899 GIMAP2Q9UG22 337 aa6.53□□□□□ -1.36
SMC3-202ENST00000462899 LEF1Q9UJU2 399 aaPredicted RBP6.53□□□□□ -1.36
SMC3-202ENST00000462899 ZNF346Q9UL40 294 aaKnown RBP6.53□□□□□ -1.36
SMC3-202ENST00000462899 FZR1Q9UM11 496 aa6.53□□□□□ -1.36
SMC3-202ENST00000462899 RASD1Q9Y272 281 aa6.53□□□□□ -1.36
SMC3-202ENST00000462899 CACNG2Q9Y698 323 aa6.53□□□□□ -1.36
SMC3-202ENST00000462899 BIRC6Q9NR09 4857 aa6.53□□□□□ -1.36
SMC3-202ENST00000462899 NOTCH3Q9UM47 2321 aa6.52□□□□□ -1.37
SMC3-202ENST00000462899 IGHV1-69-2A0A0G2JMI3 117 aa6.52□□□□□ -1.37
SMC3-202ENST00000462899 RNF103-CHMP3A0A140T963 221 aa6.52□□□□□ -1.37
SMC3-202ENST00000462899 A0A1B0GUS0 222 aa6.52□□□□□ -1.37
SMC3-202ENST00000462899 AGAP5A6NIR3 686 aa6.52□□□□□ -1.37
SMC3-202ENST00000462899 A8MXK9 166 aa6.52□□□□□ -1.37
SMC3-202ENST00000462899 TMEM114B3SHH9 223 aa6.52□□□□□ -1.37
SMC3-202ENST00000462899 TMEM233B4DJY2 109 aa6.52□□□□□ -1.37
SMC3-202ENST00000462899 PLIN3O60664 434 aa6.52□□□□□ -1.37
SMC3-202ENST00000462899 CDC14BO60729 498 aa6.52□□□□□ -1.37
SMC3-202ENST00000462899 SLC43A1O75387 559 aa6.52□□□□□ -1.37
SMC3-202ENST00000462899 CRCPO75575 148 aa6.52□□□□□ -1.37
SMC3-202ENST00000462899 LYPLA1O75608 230 aaPredicted RBP6.52□□□□□ -1.37
SMC3-202ENST00000462899 CLPTM1O96005 669 aa6.52□□□□□ -1.37
SMC3-202ENST00000462899 C1QCP02747 245 aa6.52□□□□□ -1.37
SMC3-202ENST00000462899 OR12D1P0DN82 309 aa6.52□□□□□ -1.37
SMC3-202ENST00000462899 MYL2P10916 166 aa6.52□□□□□ -1.37
SMC3-202ENST00000462899 PNMTP11086 282 aa6.52□□□□□ -1.37
SMC3-202ENST00000462899 ZNF250P15622 560 aa6.52□□□□□ -1.37
SMC3-202ENST00000462899 ZNF12P17014 697 aa6.52□□□□□ -1.37
SMC3-202ENST00000462899 ACAA2P42765 397 aaKnown RBP6.52□□□□□ -1.37
SMC3-202ENST00000462899 CLDN17P56750 224 aa6.52□□□□□ -1.37
SMC3-202ENST00000462899 CCL8P80075 99 aa6.52□□□□□ -1.37
SMC3-202ENST00000462899 LCN2P80188 198 aa6.52□□□□□ -1.37
SMC3-202ENST00000462899 SLC7A5Q01650 507 aa6.52□□□□□ -1.37
SMC3-202ENST00000462899 EGR4Q05215 589 aa6.52□□□□□ -1.37
SMC3-202ENST00000462899 BNIP2Q12982 314 aa6.52□□□□□ -1.37
SMC3-202ENST00000462899 GSG1Q2KHT4 349 aa6.52□□□□□ -1.37
SMC3-202ENST00000462899 PCGF3Q3KNV8 242 aa6.52□□□□□ -1.37
SMC3-202ENST00000462899 TMEM255AQ5JRV8 349 aa6.52□□□□□ -1.37
SMC3-202ENST00000462899 KPRPQ5T749 579 aaPredicted RBP6.52□□□□□ -1.37
SMC3-202ENST00000462899 PRAMEF8Q5VWM4 474 aa6.52□□□□□ -1.37
SMC3-202ENST00000462899 PRAMEF7Q5VXH5 474 aa6.52□□□□□ -1.37
SMC3-202ENST00000462899 TMEM225Q6GV28 225 aa6.52□□□□□ -1.37
SMC3-202ENST00000462899 CDPF1Q6NVV7 123 aa6.52□□□□□ -1.37
SMC3-202ENST00000462899 NHLRC1Q6VVB1 395 aa6.52□□□□□ -1.37
SMC3-202ENST00000462899 RBMS3Q6XE24 437 aaKnown RBP6.52□□□□□ -1.37
SMC3-202ENST00000462899 Q6ZPA2 131 aa6.52□□□□□ -1.37
SMC3-202ENST00000462899 C16orf62Q7Z3J2 963 aa6.52□□□□□ -1.37
SMC3-202ENST00000462899 CLECL1Q8IZS7 167 aa6.52□□□□□ -1.37
SMC3-202ENST00000462899 KIF18AQ8NI77 898 aa6.52□□□□□ -1.37
SMC3-202ENST00000462899 FBLIM1Q8WUP2 373 aa6.52□□□□□ -1.37
SMC3-202ENST00000462899 OR2M2Q96R28 347 aa6.52□□□□□ -1.37
SMC3-202ENST00000462899 RBM4BQ9BQ04 359 aaKnown RBP6.52□□□□□ -1.37
SMC3-202ENST00000462899 DUSP26Q9BV47 211 aa6.52□□□□□ -1.37
SMC3-202ENST00000462899 EXD2Q9NVH0 621 aa6.52□□□□□ -1.37
SMC3-202ENST00000462899 ADPRHL2Q9NX46 363 aa6.52□□□□□ -1.37
SMC3-202ENST00000462899 SEC14L4Q9UDX3 406 aa6.52□□□□□ -1.37
SMC3-202ENST00000462899 SLC7A8Q9UHI5 535 aa6.52□□□□□ -1.37
SMC3-202ENST00000462899 PURGQ9UJV8 347 aaKnown RBP6.52□□□□□ -1.37
SMC3-202ENST00000462899 PRDM4Q9UKN5 801 aa6.52□□□□□ -1.37
SMC3-202ENST00000462899 TET2Q6N021 2002 aaPredicted RBP6.52□□□□□ -1.37
SMC3-202ENST00000462899 A0A087WUV0 522 aaPredicted RBP6.51□□□□□ -1.37
SMC3-202ENST00000462899 CFAP73A6NFT4 308 aa6.51□□□□□ -1.37
SMC3-202ENST00000462899 A8MVM7 634 aa6.51□□□□□ -1.37
SMC3-202ENST00000462899 CLDN25C9JDP6 229 aa6.51□□□□□ -1.37
SMC3-202ENST00000462899 TRAPPC2LH3BP13 241 aa6.51□□□□□ -1.37
SMC3-202ENST00000462899 M0QZ24 198 aa6.51□□□□□ -1.37
SMC3-202ENST00000462899 HMGN4O00479 90 aa6.51□□□□□ -1.37
SMC3-202ENST00000462899 RNASET2O00584 256 aaKnown RBP6.51□□□□□ -1.37
SMC3-202ENST00000462899 ZNF500O60304 480 aaPredicted RBP6.51□□□□□ -1.37
SMC3-202ENST00000462899 NDUFA7O95182 113 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms