RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 ABLIM2Q6H8Q1 611 aa9.53□□□□□ -0.88
RTF1-202ENST00000462276 GFRALQ6UXV0 394 aa9.53□□□□□ -0.88
RTF1-202ENST00000462276 NHLRC1Q6VVB1 395 aa9.53□□□□□ -0.88
RTF1-202ENST00000462276 THSD4Q6ZMP0 1018 aa9.53□□□□□ -0.88
RTF1-202ENST00000462276 Q6ZPB1 254 aaPredicted RBP9.53□□□□□ -0.88
RTF1-202ENST00000462276 CREB3L2Q70SY1 520 aa9.53□□□□□ -0.88
RTF1-202ENST00000462276 FAM122BQ7Z309 247 aa9.53□□□□□ -0.88
RTF1-202ENST00000462276 THAP5Q7Z6K1 395 aa9.53□□□□□ -0.88
RTF1-202ENST00000462276 MCEMP1Q8IX19 187 aa9.53□□□□□ -0.88
RTF1-202ENST00000462276 C8orf59Q8N0T1 100 aaPredicted RBP9.53□□□□□ -0.88
RTF1-202ENST00000462276 FAM26EQ8N5C1 309 aa9.53□□□□□ -0.88
RTF1-202ENST00000462276 ST6GALNAC3Q8NDV1 305 aa9.53□□□□□ -0.88
RTF1-202ENST00000462276 OR9K2Q8NGE7 335 aa9.53□□□□□ -0.88
RTF1-202ENST00000462276 OR8D4Q8NGM9 314 aa9.53□□□□□ -0.88
RTF1-202ENST00000462276 OR6X1Q8NH79 312 aa9.53□□□□□ -0.88
RTF1-202ENST00000462276 RHOXF1Q8NHV9 184 aa9.53□□□□□ -0.88
RTF1-202ENST00000462276 ZFP3Q96NJ6 502 aa9.53□□□□□ -0.88
RTF1-202ENST00000462276 ERMAPQ96PL5 475 aaPredicted RBP9.53□□□□□ -0.88
RTF1-202ENST00000462276 TM9SF2Q99805 663 aa9.53□□□□□ -0.88
RTF1-202ENST00000462276 TUBA1CQ9BQE3 449 aa9.53□□□□□ -0.88
RTF1-202ENST00000462276 KATNB1Q9BVA0 655 aa9.53□□□□□ -0.88
RTF1-202ENST00000462276 PLA2G12AQ9BZM1 189 aa9.53□□□□□ -0.88
RTF1-202ENST00000462276 BCO1Q9HAY6 547 aa9.53□□□□□ -0.88
RTF1-202ENST00000462276 CMC2Q9NRP2 79 aa9.53□□□□□ -0.88
RTF1-202ENST00000462276 B3GAT1Q9P2W7 334 aa9.53□□□□□ -0.88
RTF1-202ENST00000462276 ZNF835Q9Y2P0 537 aa9.53□□□□□ -0.88
RTF1-202ENST00000462276 IER3IP1Q9Y5U9 82 aa9.53□□□□□ -0.88
RTF1-202ENST00000462276 ZNF726A6NNF4 738 aa9.52□□□□□ -0.89
RTF1-202ENST00000462276 CLCA1A8K7I4 914 aa9.52□□□□□ -0.89
RTF1-202ENST00000462276 MCIDASD6RGH6 385 aa9.52□□□□□ -0.89
RTF1-202ENST00000462276 C11orf98E9PRG8 122 aa9.52□□□□□ -0.89
RTF1-202ENST00000462276 SURF4O15260 269 aa9.52□□□□□ -0.89
RTF1-202ENST00000462276 F13BP05160 661 aa9.52□□□□□ -0.89
RTF1-202ENST00000462276 YES1P07947 543 aa9.52□□□□□ -0.89
RTF1-202ENST00000462276 IGFBP1P08833 259 aaPredicted RBP9.52□□□□□ -0.89
RTF1-202ENST00000462276 ABOP16442 354 aa9.52□□□□□ -0.89
RTF1-202ENST00000462276 ZNF3P17036 446 aa9.52□□□□□ -0.89
RTF1-202ENST00000462276 MYF6P23409 242 aa9.52□□□□□ -0.89
RTF1-202ENST00000462276 ACVR2AP27037 513 aa9.52□□□□□ -0.89
RTF1-202ENST00000462276 CENPAP49450 140 aa9.52□□□□□ -0.89
RTF1-202ENST00000462276 CASP6P55212 293 aa9.52□□□□□ -0.89
RTF1-202ENST00000462276 ERVK-25P63136 954 aa9.52□□□□□ -0.89
RTF1-202ENST00000462276 TMED1Q13445 227 aa9.52□□□□□ -0.89
RTF1-202ENST00000462276 ACKR1Q16570 336 aa9.52□□□□□ -0.89
RTF1-202ENST00000462276 ACSF3Q4G176 576 aaPredicted RBP9.52□□□□□ -0.89
RTF1-202ENST00000462276 ARMC4Q5T2S8 1044 aa9.52□□□□□ -0.89
RTF1-202ENST00000462276 ACSM5Q6NUN0 579 aa9.52□□□□□ -0.89
RTF1-202ENST00000462276 PTCHD4Q6ZW05 846 aa9.52□□□□□ -0.89
RTF1-202ENST00000462276 SLC35D2Q76EJ3 337 aa9.52□□□□□ -0.89
RTF1-202ENST00000462276 P4HA3Q7Z4N8 544 aa9.52□□□□□ -0.89
RTF1-202ENST00000462276 GPAT4Q86UL3 456 aa9.52□□□□□ -0.89
RTF1-202ENST00000462276 CCDC103Q8IW40 242 aa9.52□□□□□ -0.89
RTF1-202ENST00000462276 CHERPQ8IWX8 916 aaKnown RBP9.52□□□□□ -0.89
RTF1-202ENST00000462276 OR4Q3Q8NH05 313 aa9.52□□□□□ -0.89
RTF1-202ENST00000462276 FNDC9Q8TBE3 224 aa9.52□□□□□ -0.89
RTF1-202ENST00000462276 CPT1CQ8TCG5 803 aa9.52□□□□□ -0.89
RTF1-202ENST00000462276 TMEM45BQ96B21 275 aa9.52□□□□□ -0.89
RTF1-202ENST00000462276 SLC25A44Q96H78 314 aaPredicted RBP9.52□□□□□ -0.89
RTF1-202ENST00000462276 GMPPAQ96IJ6 420 aaPredicted RBP9.52□□□□□ -0.89
RTF1-202ENST00000462276 ZNF845Q96IR2 970 aaPredicted RBP9.52□□□□□ -0.89
RTF1-202ENST00000462276 LRR1Q96L50 414 aa9.52□□□□□ -0.89
RTF1-202ENST00000462276 MUS81Q96NY9 551 aa9.52□□□□□ -0.89
RTF1-202ENST00000462276 ALG12Q9BV10 488 aa9.52□□□□□ -0.89
RTF1-202ENST00000462276 ENKD1Q9H0I2 346 aa9.52□□□□□ -0.89
RTF1-202ENST00000462276 TP63Q9H3D4 680 aaPredicted RBP9.52□□□□□ -0.89
RTF1-202ENST00000462276 TVP23BQ9NYZ1 205 aa9.52□□□□□ -0.89
RTF1-202ENST00000462276 CLCF1Q9UBD9 225 aa9.52□□□□□ -0.89
RTF1-202ENST00000462276 LRCH1Q9Y2L9 728 aa9.52□□□□□ -0.89
RTF1-202ENST00000462276 IGSF10Q6WRI0 2623 aa9.52□□□□□ -0.89
RTF1-202ENST00000462276 SH3D21A4FU49 640 aa9.51□□□□□ -0.89
RTF1-202ENST00000462276 ZNF716A6NP11 495 aa9.51□□□□□ -0.89
RTF1-202ENST00000462276 TRAF3IP2O43734 574 aaPredicted RBP9.51□□□□□ -0.89
RTF1-202ENST00000462276 SLC19A2O60779 497 aa9.51□□□□□ -0.89
RTF1-202ENST00000462276 PPP1R3DO95685 299 aa9.51□□□□□ -0.89
RTF1-202ENST00000462276 RENP00797 406 aa9.51□□□□□ -0.89
RTF1-202ENST00000462276 IGHG1P01857 330 aa9.51□□□□□ -0.89
RTF1-202ENST00000462276 TPOP07202 933 aa9.51□□□□□ -0.89
RTF1-202ENST00000462276 IFNGR1P15260 489 aa9.51□□□□□ -0.89
RTF1-202ENST00000462276 TIMP3P35625 211 aa9.51□□□□□ -0.89
RTF1-202ENST00000462276 BLVRAP53004 296 aa9.51□□□□□ -0.89
RTF1-202ENST00000462276 SLC25A1P53007 311 aa9.51□□□□□ -0.89
RTF1-202ENST00000462276 CXCR4P61073 352 aa9.51□□□□□ -0.89
RTF1-202ENST00000462276 ISL1P61371 349 aa9.51□□□□□ -0.89
RTF1-202ENST00000462276 POU3F1Q03052 451 aaPredicted RBP9.51□□□□□ -0.89
RTF1-202ENST00000462276 LGALS3BPQ08380 585 aa9.51□□□□□ -0.89
RTF1-202ENST00000462276 NFATC3Q12968 1075 aa9.51□□□□□ -0.89
RTF1-202ENST00000462276 KRR1Q13601 381 aaKnown RBP9.51□□□□□ -0.89
RTF1-202ENST00000462276 OCLNQ16625 522 aa9.51□□□□□ -0.89
RTF1-202ENST00000462276 TMEM236Q5W0B7 351 aa9.51□□□□□ -0.89
RTF1-202ENST00000462276 KRT80Q6KB66 452 aa9.51□□□□□ -0.89
RTF1-202ENST00000462276 ZNF585AQ6P3V2 769 aa9.51□□□□□ -0.89
RTF1-202ENST00000462276 FGD2Q7Z6J4 655 aa9.51□□□□□ -0.89
RTF1-202ENST00000462276 JAZF1Q86VZ6 243 aa9.51□□□□□ -0.89
RTF1-202ENST00000462276 MARVELD2Q8N4S9 558 aa9.51□□□□□ -0.89
RTF1-202ENST00000462276 ZNF519Q8TB69 540 aa9.51□□□□□ -0.89
RTF1-202ENST00000462276 FAM81AQ8TBF8 368 aa9.51□□□□□ -0.89
RTF1-202ENST00000462276 TMEM163Q8TC26 289 aa9.51□□□□□ -0.89
RTF1-202ENST00000462276 FBLIM1Q8WUP2 373 aa9.51□□□□□ -0.89
RTF1-202ENST00000462276 ROBO4Q8WZ75 1007 aa9.51□□□□□ -0.89
RTF1-202ENST00000462276 RFKQ969G6 155 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms