RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 ZNF687Q8N1G0 1237 aa13.27□□□□□ -0.29
NCL-207ENST00000461347 PLPP7Q8NBV4 271 aa13.27□□□□□ -0.29
NCL-207ENST00000461347 STOML3Q8TAV4 291 aa13.27□□□□□ -0.29
NCL-207ENST00000461347 SPPL3Q8TCT6 385 aa13.27□□□□□ -0.29
NCL-207ENST00000461347 ZBTB8AQ96BR9 441 aa13.27□□□□□ -0.29
NCL-207ENST00000461347 EMC3Q9P0I2 261 aa13.27□□□□□ -0.29
NCL-207ENST00000461347 CPNE7Q9UBL6 633 aa13.27□□□□□ -0.29
NCL-207ENST00000461347 ZSWIM8A7E2V4 1837 aa13.26□□□□□ -0.29
NCL-207ENST00000461347 MEIKINA0A087WXM9 373 aa13.26□□□□□ -0.29
NCL-207ENST00000461347 A0A0J9YY10 115 aa13.26□□□□□ -0.29
NCL-207ENST00000461347 SFTPBP07988 381 aa13.26□□□□□ -0.29
NCL-207ENST00000461347 CD14P08571 375 aa13.26□□□□□ -0.29
NCL-207ENST00000461347 MESP2Q0VG99 397 aa13.26□□□□□ -0.29
NCL-207ENST00000461347 MAMDC2Q7Z304 686 aaPredicted RBP13.26□□□□□ -0.29
NCL-207ENST00000461347 LIX1LQ8IVB5 337 aa13.26□□□□□ -0.29
NCL-207ENST00000461347 SYS1Q8N2H4 156 aa13.26□□□□□ -0.29
NCL-207ENST00000461347 PHYHIPQ92561 330 aa13.26□□□□□ -0.29
NCL-207ENST00000461347 PTP4A1Q93096 173 aa13.26□□□□□ -0.29
NCL-207ENST00000461347 KIR3DX1Q9H7L2 352 aa13.26□□□□□ -0.29
NCL-207ENST00000461347 POMT2Q9UKY4 750 aa13.26□□□□□ -0.29
NCL-207ENST00000461347 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.26□□□□□ -0.29
NCL-207ENST00000461347 SHISA3A0PJX4 238 aa13.26□□□□□ -0.29
NCL-207ENST00000461347 SERINC4A6NH21 518 aa13.26□□□□□ -0.29
NCL-207ENST00000461347 GLCEO94923 617 aa13.26□□□□□ -0.29
NCL-207ENST00000461347 HNRNPA2B1P22626 353 aaKnown RBP13.26□□□□□ -0.29
NCL-207ENST00000461347 PLCXD2Q0VAA5 305 aa13.26□□□□□ -0.29
NCL-207ENST00000461347 C17orf107Q6ZR85 190 aa13.26□□□□□ -0.29
NCL-207ENST00000461347 TTLL10Q6ZVT0 673 aa13.26□□□□□ -0.29
NCL-207ENST00000461347 DEFB119Q8N690 84 aa13.26□□□□□ -0.29
NCL-207ENST00000461347 ACBD4Q8NC06 268 aa13.26□□□□□ -0.29
NCL-207ENST00000461347 SCARB1Q8WTV0 552 aa13.26□□□□□ -0.29
NCL-207ENST00000461347 FAM3CQ92520 227 aa13.26□□□□□ -0.29
NCL-207ENST00000461347 GIMAP5Q96F15 307 aa13.26□□□□□ -0.29
NCL-207ENST00000461347 TGM7Q96PF1 710 aa13.26□□□□□ -0.29
NCL-207ENST00000461347 MRPS18AQ9NVS2 196 aaKnown RBP13.26□□□□□ -0.29
NCL-207ENST00000461347 GPN3Q9UHW5 284 aaPredicted RBP13.26□□□□□ -0.29
NCL-207ENST00000461347 GLS2Q9UI32 602 aa13.26□□□□□ -0.29
NCL-207ENST00000461347 C17orf105B2RV13 164 aa13.26□□□□□ -0.29
NCL-207ENST00000461347 APBB3O95704 486 aa13.26□□□□□ -0.29
NCL-207ENST00000461347 SCGB1D2O95969 90 aa13.26□□□□□ -0.29
NCL-207ENST00000461347 CEACAM5P06731 702 aa13.26□□□□□ -0.29
NCL-207ENST00000461347 ACSM4P0C7M7 580 aa13.26□□□□□ -0.29
NCL-207ENST00000461347 IL32P24001 234 aa13.26□□□□□ -0.29
NCL-207ENST00000461347 TAS2R19P59542 299 aa13.26□□□□□ -0.29
NCL-207ENST00000461347 IL13RA1P78552 427 aa13.26□□□□□ -0.29
NCL-207ENST00000461347 PLA1AQ53H76 456 aa13.26□□□□□ -0.29
NCL-207ENST00000461347 EIF5AL1Q6IS14 154 aaKnown RBP13.26□□□□□ -0.29
NCL-207ENST00000461347 NDUFAF7Q7L592 441 aa13.26□□□□□ -0.29
NCL-207ENST00000461347 SFXN1Q9H9B4 322 aa13.26□□□□□ -0.29
NCL-207ENST00000461347 ADGRL4Q9HBW9 690 aa13.26□□□□□ -0.29
NCL-207ENST00000461347 A0A1B0GUH1 482 aa13.25□□□□□ -0.29
NCL-207ENST00000461347 SULT1B1O43704 296 aa13.25□□□□□ -0.29
NCL-207ENST00000461347 GALP22466 123 aa13.25□□□□□ -0.29
NCL-207ENST00000461347 SLC6A9P48067 706 aa13.25□□□□□ -0.29
NCL-207ENST00000461347 EIF2B1Q14232 305 aaKnown RBP13.25□□□□□ -0.29
NCL-207ENST00000461347 FAM76BQ5HYJ3 339 aa13.25□□□□□ -0.29
NCL-207ENST00000461347 SLC25A24Q6NUK1 477 aa13.25□□□□□ -0.29
NCL-207ENST00000461347 KIRREL2Q6UWL6 708 aa13.25□□□□□ -0.29
NCL-207ENST00000461347 USP53Q70EK8 1073 aa13.25□□□□□ -0.29
NCL-207ENST00000461347 ST8SIA2Q92186 375 aa13.25□□□□□ -0.29
NCL-207ENST00000461347 HAVCR1Q96D42 359 aa13.25□□□□□ -0.29
NCL-207ENST00000461347 RNF170Q96K19 258 aa13.25□□□□□ -0.29
NCL-207ENST00000461347 ENKD1Q9H0I2 346 aa13.25□□□□□ -0.29
NCL-207ENST00000461347 SERGEFQ9UGK8 458 aa13.25□□□□□ -0.29
NCL-207ENST00000461347 ING1Q9UK53 422 aaPredicted RBP13.25□□□□□ -0.29
NCL-207ENST00000461347 PCYT1BQ9Y5K3 369 aaPredicted RBP13.25□□□□□ -0.29
NCL-207ENST00000461347 ENTPD2Q9Y5L3 495 aa13.25□□□□□ -0.29
NCL-207ENST00000461347 TRAV1-2A0A0B4J238 106 aa13.25□□□□□ -0.29
NCL-207ENST00000461347 ITGA5P08648 1049 aa13.25□□□□□ -0.29
NCL-207ENST00000461347 APEHP13798 732 aaKnown RBP13.25□□□□□ -0.29
NCL-207ENST00000461347 SELENOPP49908 381 aa13.25□□□□□ -0.29
NCL-207ENST00000461347 CHAF1BQ13112 559 aa13.25□□□□□ -0.29
NCL-207ENST00000461347 MEP1BQ16820 701 aa13.25□□□□□ -0.29
NCL-207ENST00000461347 Q6ZSR6 202 aa13.25□□□□□ -0.29
NCL-207ENST00000461347 OR5M1Q8NGP8 315 aa13.25□□□□□ -0.29
NCL-207ENST00000461347 STACQ99469 402 aa13.25□□□□□ -0.29
NCL-207ENST00000461347 PHYHO14832 338 aa13.25□□□□□ -0.29
NCL-207ENST00000461347 EIF5AP63241 154 aaKnown RBP13.25□□□□□ -0.29
NCL-207ENST00000461347 C19orf57Q0VDD7 668 aa13.25□□□□□ -0.29
NCL-207ENST00000461347 WBP2NLQ6ICG8 309 aa13.25□□□□□ -0.29
NCL-207ENST00000461347 MCATQ8IVS2 390 aaKnown RBP13.25□□□□□ -0.29
NCL-207ENST00000461347 SCMH1Q96GD3 660 aa13.25□□□□□ -0.29
NCL-207ENST00000461347 RBP7Q96R05 134 aa13.25□□□□□ -0.29
NCL-207ENST00000461347 NKX3-1Q99801 234 aaPredicted RBP13.25□□□□□ -0.29
NCL-207ENST00000461347 LMF2Q9BU23 707 aaKnown RBP13.25□□□□□ -0.29
NCL-207ENST00000461347 LRIT1Q9P2V4 623 aa13.25□□□□□ -0.29
NCL-207ENST00000461347 SLC22A7Q9Y694 548 aa13.25□□□□□ -0.29
NCL-207ENST00000461347 DOCK6Q96HP0 2047 aa13.24□□□□□ -0.29
NCL-207ENST00000461347 CENPVL1A0A0U1RR11 272 aa13.24□□□□□ -0.29
NCL-207ENST00000461347 CCSO14618 274 aa13.24□□□□□ -0.29
NCL-207ENST00000461347 LILRB5O75023 590 aa13.24□□□□□ -0.29
NCL-207ENST00000461347 ZNF28P17035 718 aa13.24□□□□□ -0.29
NCL-207ENST00000461347 EMDP50402 254 aa13.24□□□□□ -0.29
NCL-207ENST00000461347 NR0B1P51843 470 aaKnown RBP13.24□□□□□ -0.29
NCL-207ENST00000461347 LUMP51884 338 aaPredicted RBP13.24□□□□□ -0.29
NCL-207ENST00000461347 HTRA3P83110 453 aa13.24□□□□□ -0.29
NCL-207ENST00000461347 NFATC4Q14934 902 aa13.24□□□□□ -0.29
NCL-207ENST00000461347 LGALSLQ3ZCW2 172 aaPredicted RBP13.24□□□□□ -0.29
NCL-207ENST00000461347 VASNQ6EMK4 673 aa13.24□□□□□ -0.29
NCL-207ENST00000461347 TMPRSS11FQ6ZWK6 438 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms