RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 SAT2Q96F10 170 aaPredicted RBP4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 DUS3LQ96G46 650 aaKnown RBP4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 RITA1Q96K30 269 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 PPP1R36Q96LQ0 422 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 ZNF597Q96LX8 424 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 APOL4Q9BPW4 351 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 SEC22CQ9BRL7 303 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 NTMT1Q9BV86 223 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 RAB11FIP5Q9BXF6 653 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 ANKRD60Q9BZ19 345 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 C20orf27Q9GZN8 174 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 RACGAP1Q9H0H5 632 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 ALX4Q9H161 411 aaPredicted RBP4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 RHBGQ9H310 441 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 PIGUQ9H490 435 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 ACTR8Q9H981 624 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 MID1IP1Q9NPA3 183 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 GLRX2Q9NS18 164 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 CUTCQ9NTM9 273 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 NUDT15Q9NV35 164 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 TMEM184CQ9NVA4 438 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 PAK1IP1Q9NWT1 392 aaPredicted RBP4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 PTTG3PQ9NZH4 202 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 CTSFQ9UBX1 484 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 DCDC2Q9UHG0 476 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 ZNF229Q9UJW7 825 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 COPS3Q9UNS2 423 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 PLCL2Q9UPR0 1127 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 MRPS7Q9Y2R9 242 aaKnown RBP4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 FAM96BQ9Y3D0 163 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 DOCK10Q96BY6 2186 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 CENPEQ02224 2701 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 PCNX1Q96RV3 2341 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 RP1L1Q8IWN7 2480 aaPredicted RBP4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 IGHV3-20A0A0C4DH32 117 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 A0A0G2JMP0 313 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 TRBC2A0A5B9 178 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 SLC22A23A1A5C7 686 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 A6NL46 340 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 ZNF729A6NN14 1252 aaPredicted RBP4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 MAGEB17A8MXT2 336 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 KRBOX1C9JBD0 128 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 NPIPB11E5RHQ5 1161 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 TMX2-CTNND1H3BSU7 103 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 KLF11O14901 512 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 TOX3O15405 576 aaPredicted RBP4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 SEC14L5O43304 696 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 ADAM20O43506 726 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 SLC25A17O43808 307 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 ZNF780AO75290 641 aaPredicted RBP4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 EEDO75530 441 aaKnown RBP4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 SNAPC5O75971 98 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 MFN2O95140 757 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 PLAUP00749 431 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 PDYNP01213 254 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 APOA1P02647 267 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 GLAP06280 429 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 BPGMP07738 259 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 CLUP10909 449 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 PRF1P14222 555 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 GABRB1P18505 474 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 ZP3P21754 424 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 CERS1P27544 350 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 CDAP32320 146 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 RORAP35398 523 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 CAPZA2P47755 286 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 HNMTP50135 292 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 ARFIP1P53367 373 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 PLA2G16P53816 162 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 F2RL1P55085 397 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 HERVK_113P63132 956 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 ABATP80404 500 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 HMGCS1Q01581 520 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 ID2Q02363 134 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 STX5Q13190 355 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 PMS2P3Q13401 168 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 RUNX2Q13950 521 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 CHI3L2Q15782 390 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 NTRK2Q16620 822 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 PRTGQ2VWP7 1150 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 KRTAP21-3Q3LHN1 58 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 ATAD3CQ5T2N8 411 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 CCNYL2Q5T2Q4 361 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 PDSS1Q5T2R2 415 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 C6orf52Q5T4I8 152 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 MLIPQ5VWP3 458 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 MORN5Q5VZ52 161 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 ZNF626Q68DY1 528 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 TYW3Q6IPR3 259 aaKnown RBP4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 HMBOX1Q6NT76 420 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 FAM198BQ6UWH4 519 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 TMIGD1Q6UXZ0 262 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 CEACAM20Q6UY09 585 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 TFAP2EQ6VUC0 442 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 GLDNQ6ZMI3 551 aaPredicted RBP4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 ZNF793Q6ZN11 406 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 SLC16A12Q6ZSM3 486 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 PRSS48Q7RTY5 328 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 TBC1D26Q86UD7 250 aa4.36□□□□□ -1.71
ATPAF1-203ENST00000460928 FJX1Q86VR8 437 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms