RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 CLRN2A0PK11 232 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 HELTA6NFD8 242 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 RGS16O15492 202 aaPredicted RBP2.28□□□□□ -2.04
RFC4-211ENST00000460408 ZNF208O43345 1280 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 TRAF3IP2O43734 574 aaPredicted RBP2.28□□□□□ -2.04
RFC4-211ENST00000460408 NPIPB7O75200 414 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 SURF6O75683 361 aaKnown RBP2.28□□□□□ -2.04
RFC4-211ENST00000460408 BBOX1O75936 387 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 ATP5LO75964 103 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 IL1BP01584 269 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 KRT6AP02538 564 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 HPNP05981 417 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 HSMCR30P0CW71 290 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 NCK1P16333 377 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 SHMT2P34897 504 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 RFC4P35249 363 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 KIR2DS4P43632 304 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 AIF1P55008 147 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 WNT4P56705 351 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 TNFRSF17Q02223 184 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 CKAP4Q07065 602 aaKnown RBP2.28□□□□□ -2.04
RFC4-211ENST00000460408 FGL1Q08830 312 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 ASPHQ12797 758 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 DUSP7Q16829 419 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 ZNF630Q2M218 657 aaPredicted RBP2.28□□□□□ -2.04
RFC4-211ENST00000460408 BCL7AQ4VC05 210 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 C1orf100Q5SVJ3 147 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 PMF1Q6P1K2 205 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 DHDDSQ86SQ9 333 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 TRIM69Q86WT6 500 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 KRTAP11-1Q8IUC1 163 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 FTMTQ8N4E7 242 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 EIF1ADQ8N9N8 165 aaKnown RBP2.28□□□□□ -2.04
RFC4-211ENST00000460408 C20orf203Q8NBC4 194 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 TRPV1Q8NER1 839 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 OR4K14Q8NGD5 310 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 OR51S1Q8NGJ8 323 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 SCFD1Q8WVM8 642 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 ZNF606Q8WXB4 792 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 DCUN1D4Q92564 292 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 RPUSD4Q96CM3 377 aaKnown RBP2.28□□□□□ -2.04
RFC4-211ENST00000460408 PAGE5Q96GU1 130 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 SEC22AQ96IW7 307 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 OXGR1Q96P68 337 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 NPY6RQ99463 290 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 HIST1H4GQ99525 98 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 REEP4Q9H6H4 257 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 TREM2Q9NZC2 230 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 ADAM22Q9P0K1 906 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 CDH9Q9ULB4 789 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 CLEC4AQ9UMR7 237 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 COPS3Q9UNS2 423 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 RPL36Q9Y3U8 105 aaKnown RBP2.28□□□□□ -2.04
RFC4-211ENST00000460408 V9GY05 133 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 KIF13BQ9NQT8 1826 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 TRPM3Q9HCF6 1732 aaPredicted RBP2.28□□□□□ -2.05
RFC4-211ENST00000460408 CEP162Q5TB80 1403 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 PPIP5K1Q6PFW1 1433 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 ANKRD36BQ8N2N9 1353 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 RPAP1Q9BWH6 1393 aaPredicted RBP2.27□□□□□ -2.05
RFC4-211ENST00000460408 ANKRD30AQ9BXX3 1397 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 AKAP11Q9UKA4 1901 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 BRCA1P38398 1863 aaKnown RBP2.27□□□□□ -2.05
RFC4-211ENST00000460408 BRCA2P51587 3418 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 FRMPD3Q5JV73 1810 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 WNK3Q9BYP7 1800 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 A6NIZ1 184 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 SNTNA6NMZ2 147 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 USP27XA6NNY8 438 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 E9PBE3 544 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 LOC110117498-PIK3R3F6TDL0 507 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 RIPK2O43353 540 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 KRTAP5-8O75690 187 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 CXCR2P25025 360 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 ANXA13P27216 316 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 CALRP27797 417 aaKnown RBP2.27□□□□□ -2.05
RFC4-211ENST00000460408 CD1BP29016 333 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 GNA11P29992 359 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 CCR1P32246 355 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 CTRLP40313 264 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 OPRD1P41143 372 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 MAGEA8P43361 318 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 ATP1B3P54709 279 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 PKNOX1P55347 436 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 NUP107P57740 925 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 RAP1BP61224 184 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 PARP15Q460N3 678 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 DMRTC1Q5HYR2 192 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 OR52E8Q6IFG1 317 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 PGAP1Q75T13 922 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 Q8N7P7 452 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 ZNF740Q8NDX6 193 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 OR10G3Q8NGC4 313 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 OR52H1Q8NGJ2 320 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 OR8J1Q8NGP2 316 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 MAGEE2Q8TD90 523 aaPredicted RBP2.27□□□□□ -2.05
RFC4-211ENST00000460408 MAIP1Q8WWC4 291 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 UFD1Q92890 307 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 FGF11Q92914 225 aa2.27□□□□□ -2.05
RFC4-211ENST00000460408 RBM14Q96PK6 669 aaKnown RBP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms