RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 NOS1APO75052 506 aaPredicted RBP9.31□□□□□ -0.92
USP39-210ENST00000459775 TRIM3O75382 744 aaPredicted RBP9.31□□□□□ -0.92
USP39-210ENST00000459775 SOX14O95416 240 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 PTBP3O95758 552 aaKnown RBP9.31□□□□□ -0.92
USP39-210ENST00000459775 PNPP00491 289 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 IL1AP01583 271 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 PEPDP12955 493 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 MAKP20794 623 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 SLC1A3P43003 542 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 SPCS3P61009 180 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 EGR4Q05215 589 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 DBPQ10586 325 aaPredicted RBP9.31□□□□□ -0.92
USP39-210ENST00000459775 MERTKQ12866 999 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 CBFBQ13951 182 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 DAG1Q14118 895 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 GK3PQ14409 553 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 TIGD3Q6B0B8 471 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 WBP2NLQ6ICG8 309 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 ZNF613Q6PF04 617 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 ULK3Q6PHR2 472 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 ATG4DQ86TL0 474 aaPredicted RBP9.31□□□□□ -0.92
USP39-210ENST00000459775 YRDCQ86U90 279 aaKnown RBP9.31□□□□□ -0.92
USP39-210ENST00000459775 ADGRG3Q86Y34 549 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 FADS6Q8N9I5 356 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 BBS1Q8NFJ9 593 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 OR1J4Q8NGS1 313 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 TAS2R10Q9NYW0 307 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 ABI3Q9P2A4 366 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 TNRC6AQ8NDV7 1962 aaKnown RBP9.31□□□□□ -0.92
USP39-210ENST00000459775 ANKUB1A6NFN9 424 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 FAM166BA8MTA8 275 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 ZIC3O60481 467 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 DPM1O60762 260 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 CEACAM4O75871 244 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 SP1P08047 785 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 GNAO1P09471 354 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 GP1BBP13224 206 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 PGCP20142 388 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 CNR1P21554 472 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 CASRP41180 1078 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 SUCLG1P53597 346 aaKnown RBP9.31□□□□□ -0.92
USP39-210ENST00000459775 GNG2P59768 71 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 GLO1Q04760 184 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 IL24Q13007 206 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 LY6DQ14210 128 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 TBR1Q16650 682 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 PLPPR5Q32ZL2 321 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 RNFT1Q5M7Z0 435 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 HES5Q5TA89 166 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.31□□□□□ -0.92
USP39-210ENST00000459775 HIPK1Q86Z02 1210 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 CCDC28AQ8IWP9 274 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 ZNF440Q8IYI8 595 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 SVOPLQ8N434 492 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 OR2M7Q8NG81 312 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 TMEM239Q8WW34 195 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 CAPSLQ8WWF8 208 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 SLC38A4Q969I6 547 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 KTI12Q96EK9 354 aaPredicted RBP9.31□□□□□ -0.92
USP39-210ENST00000459775 MBOAT4Q96T53 435 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 ADAM19Q9H013 955 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 TSPAN10Q9H1Z9 355 aaPredicted RBP9.31□□□□□ -0.92
USP39-210ENST00000459775 OR51V1Q9H2C8 321 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 CAMK2AQ9UQM7 478 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 TMEM72A0PK05 275 aa9.3□□□□□ -0.92
USP39-210ENST00000459775 MFSD2BA6NFX1 497 aa9.3□□□□□ -0.92
USP39-210ENST00000459775 ELOA3DA6NLF2 546 aaPredicted RBP9.3□□□□□ -0.92
USP39-210ENST00000459775 CHP2O43745 196 aa9.3□□□□□ -0.92
USP39-210ENST00000459775 COX5BP10606 129 aa9.3□□□□□ -0.92
USP39-210ENST00000459775 IGFBP5P24593 272 aa9.3□□□□□ -0.92
USP39-210ENST00000459775 DPP4P27487 766 aa9.3□□□□□ -0.92
USP39-210ENST00000459775 SHC1P29353 583 aa9.3□□□□□ -0.92
USP39-210ENST00000459775 OMPP47874 163 aa9.3□□□□□ -0.92
USP39-210ENST00000459775 TNFSF10P50591 281 aa9.3□□□□□ -0.92
USP39-210ENST00000459775 SNTA1Q13424 505 aa9.3□□□□□ -0.92
USP39-210ENST00000459775 ELOA3BQ3SY89 546 aa9.3□□□□□ -0.92
USP39-210ENST00000459775 TMEM236Q5W0B7 351 aa9.3□□□□□ -0.92
USP39-210ENST00000459775 KDM4DQ6B0I6 523 aa9.3□□□□□ -0.92
USP39-210ENST00000459775 SLC25A25Q6KCM7 469 aa9.3□□□□□ -0.92
USP39-210ENST00000459775 MTFR2Q6P444 385 aa9.3□□□□□ -0.92
USP39-210ENST00000459775 FAHD1Q6P587 224 aa9.3□□□□□ -0.92
USP39-210ENST00000459775 LINC00114Q6XXX2 140 aa9.3□□□□□ -0.92
USP39-210ENST00000459775 MISPQ8IVT2 679 aa9.3□□□□□ -0.92
USP39-210ENST00000459775 ELMOD2Q8IZ81 293 aa9.3□□□□□ -0.92
USP39-210ENST00000459775 SETD9Q8NE22 299 aa9.3□□□□□ -0.92
USP39-210ENST00000459775 ELOA3Q8NG57 546 aa9.3□□□□□ -0.92
USP39-210ENST00000459775 OR13C2Q8NGS9 318 aa9.3□□□□□ -0.92
USP39-210ENST00000459775 ACOT11Q8WXI4 607 aaPredicted RBP9.3□□□□□ -0.92
USP39-210ENST00000459775 HAS2Q92819 552 aa9.3□□□□□ -0.92
USP39-210ENST00000459775 SLC25A36Q96CQ1 311 aa9.3□□□□□ -0.92
USP39-210ENST00000459775 C1GALT1C1Q96EU7 318 aa9.3□□□□□ -0.92
USP39-210ENST00000459775 CLUHP3Q96NS8 147 aa9.3□□□□□ -0.92
USP39-210ENST00000459775 ENKD1Q9H0I2 346 aa9.3□□□□□ -0.92
USP39-210ENST00000459775 TOR3AQ9H497 397 aa9.3□□□□□ -0.92
USP39-210ENST00000459775 DIABLOQ9NR28 239 aa9.3□□□□□ -0.92
USP39-210ENST00000459775 SELENONQ9NZV5 590 aa9.3□□□□□ -0.92
USP39-210ENST00000459775 SEC14L4Q9UDX3 406 aa9.3□□□□□ -0.92
USP39-210ENST00000459775 FOXD3Q9UJU5 478 aaPredicted RBP9.3□□□□□ -0.92
USP39-210ENST00000459775 PTPRQQ9UMZ3 2332 aa9.3□□□□□ -0.92
USP39-210ENST00000459775 SMG1Q96Q15 3661 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms