RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 IGHMP01871 453 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 CD2P06729 351 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 GIPP09681 153 aaPredicted RBP8.05□□□□□ -1.12
HDAC3-202ENST00000459727 GP1BBP13224 206 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 CXCR1P25024 350 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 DPP4P27487 766 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 AQP2P41181 271 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 GABRA4P48169 554 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 FNTBP49356 437 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 ARL4DP49703 201 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 CCR4P51679 360 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 POLR2HP52434 150 aaKnown RBP8.05□□□□□ -1.12
HDAC3-202ENST00000459727 MAP2K6P52564 334 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 PNLIPRP2P54317 469 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 SUMO3P55854 103 aaPredicted RBP8.05□□□□□ -1.12
HDAC3-202ENST00000459727 SLC37A1P57057 533 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 ACTBP60709 375 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 RAB14P61106 215 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 RAP2BP61225 183 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 HNRNPKP61978 463 aaKnown RBP eCLIP8.05□□□□□ -1.12
HDAC3-202ENST00000459727 RACK1P63244 317 aaKnown RBP8.05□□□□□ -1.12
HDAC3-202ENST00000459727 ACTG1P63261 375 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 CBFBQ13951 182 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 SGCBQ16585 318 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 ESCO2Q56NI9 601 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 EEF1A1P5Q5VTE0 462 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 SLC18B1Q6NT16 456 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 FAM199XQ6PEV8 388 aaPredicted RBP8.05□□□□□ -1.12
HDAC3-202ENST00000459727 ZC3H14Q6PJT7 736 aaKnown RBP8.05□□□□□ -1.12
HDAC3-202ENST00000459727 DGAT2L6Q6ZPD8 337 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 SLC29A4Q7RTT9 530 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 GLCCI1Q86VQ1 547 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 C17orf82Q86X59 251 aaPredicted RBP8.05□□□□□ -1.12
HDAC3-202ENST00000459727 CDH26Q8IXH8 852 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 ZNF676Q8N7Q3 588 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 TSTD1Q8NFU3 115 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 CADM4Q8NFZ8 388 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 STK35Q8TDR2 534 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 TMEM234Q8WY98 164 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 SNAPC3Q92966 411 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 RASD2Q96D21 266 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 Q96M85 177 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 DCBLD2Q96PD2 775 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 MAP3K3Q99759 626 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 PDCD1LG2Q9BQ51 273 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 RBCK1Q9BYM8 510 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 SLCO5A1Q9H2Y9 848 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 LIN7BQ9HAP6 207 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 HRASLSQ9HDD0 168 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 STARD5Q9NSY2 213 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 UPB1Q9UBR1 384 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 STEAP1Q9UHE8 339 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 ZNF107Q9UII5 783 aaPredicted RBP8.05□□□□□ -1.12
HDAC3-202ENST00000459727 IKZF2Q9UKS7 526 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 ELF5Q9UKW6 265 aaPredicted RBP8.05□□□□□ -1.12
HDAC3-202ENST00000459727 MGAT4AQ9UM21 535 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 COPS3Q9UNS2 423 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 CYP8B1Q9UNU6 501 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 CLDN16Q9Y5I7 305 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 IGKV3D-11A0A0A0MRZ8 115 aa8.04□□□□□ -1.12
HDAC3-202ENST00000459727 LINC00862A6NCI5 91 aa8.04□□□□□ -1.12
HDAC3-202ENST00000459727 A6NIZ1 184 aa8.04□□□□□ -1.12
HDAC3-202ENST00000459727 TGFBR3LH3BV60 316 aa8.04□□□□□ -1.12
HDAC3-202ENST00000459727 TNFRSF10AO00220 468 aa8.04□□□□□ -1.12
HDAC3-202ENST00000459727 DVL2O14641 736 aa8.04□□□□□ -1.12
HDAC3-202ENST00000459727 GNB5O14775 395 aa8.04□□□□□ -1.12
HDAC3-202ENST00000459727 XRCC3O43542 346 aa8.04□□□□□ -1.12
HDAC3-202ENST00000459727 UPK3AO75631 287 aa8.04□□□□□ -1.12
HDAC3-202ENST00000459727 SCGNO76038 276 aa8.04□□□□□ -1.12
HDAC3-202ENST00000459727 RGS11O94810 467 aa8.04□□□□□ -1.12
HDAC3-202ENST00000459727 ABHD16AO95870 558 aa8.04□□□□□ -1.12
HDAC3-202ENST00000459727 IGKV3-11P04433 115 aa8.04□□□□□ -1.12
HDAC3-202ENST00000459727 SYPP08247 313 aa8.04□□□□□ -1.12
HDAC3-202ENST00000459727 TFPIP10646 304 aa8.04□□□□□ -1.12
HDAC3-202ENST00000459727 IFNGR1P15260 489 aa8.04□□□□□ -1.12
HDAC3-202ENST00000459727 ALOX5APP20292 161 aa8.04□□□□□ -1.12
HDAC3-202ENST00000459727 MAOAP21397 527 aa8.04□□□□□ -1.12
HDAC3-202ENST00000459727 DNASE1P24855 282 aa8.04□□□□□ -1.12
HDAC3-202ENST00000459727 CD38P28907 300 aa8.04□□□□□ -1.12
HDAC3-202ENST00000459727 TACR3P29371 465 aa8.04□□□□□ -1.12
HDAC3-202ENST00000459727 CRABP1P29762 137 aa8.04□□□□□ -1.12
HDAC3-202ENST00000459727 CDKN2AP42771 156 aaKnown RBP8.04□□□□□ -1.12
HDAC3-202ENST00000459727 PER3P56645 1201 aa8.04□□□□□ -1.12
HDAC3-202ENST00000459727 RAP1BP61224 184 aa8.04□□□□□ -1.12
HDAC3-202ENST00000459727 RAP1AP62834 184 aa8.04□□□□□ -1.12
HDAC3-202ENST00000459727 HSD11B2P80365 405 aa8.04□□□□□ -1.12
HDAC3-202ENST00000459727 RPL18Q07020 188 aaKnown RBP8.04□□□□□ -1.12
HDAC3-202ENST00000459727 MADCAM1Q13477 382 aa8.04□□□□□ -1.12
HDAC3-202ENST00000459727 RBMS2Q15434 407 aaKnown RBP8.04□□□□□ -1.12
HDAC3-202ENST00000459727 C14orf28Q4W4Y0 310 aa8.04□□□□□ -1.12
HDAC3-202ENST00000459727 LIPNQ5VXI9 398 aa8.04□□□□□ -1.12
HDAC3-202ENST00000459727 LAMTOR1Q6IAA8 161 aa8.04□□□□□ -1.12
HDAC3-202ENST00000459727 PWWP2BQ6NUJ5 590 aa8.04□□□□□ -1.12
HDAC3-202ENST00000459727 OGFOD3Q6PK18 319 aa8.04□□□□□ -1.12
HDAC3-202ENST00000459727 STAC2Q6ZMT1 411 aa8.04□□□□□ -1.12
HDAC3-202ENST00000459727 DNM1P46Q6ZS02 220 aa8.04□□□□□ -1.12
HDAC3-202ENST00000459727 PLXDC1Q8IUK5 500 aa8.04□□□□□ -1.12
HDAC3-202ENST00000459727 TMEM151BQ8IW70 566 aa8.04□□□□□ -1.12
HDAC3-202ENST00000459727 DND1Q8IYX4 353 aaKnown RBP8.04□□□□□ -1.12
HDAC3-202ENST00000459727 ZNF433Q8N7K0 673 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms